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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:0.5TPM
GTEx:20.2RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:Medium
Neuronal cells:High
Neuropil:Low
 

Antibody staining

Antibody HPA046697

 

Antibody HPA061174

 

Antibody CAB025192

 

Endothelial cells

Medium   Low   Not detected  

Glial cells

Medium   Low   High  

Neuronal cells

High   High   High  

Neuropil

Low   Not detected   Not detected  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

0.5

N/A Male, age 5
Sample 1
TPM: 0.0
overview Female, age 40
Sample 2
TPM: 0.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 1.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

20.2

GTEx sample id

RPKM

16.320.422.99.129.105101520253035
 
16.320.422.99.129.105101520253035

Brain - Cortex

Brain - Cortex
RPKM: 19.8
Samples: 114

Max RPKM: 39
Min RPKM: 9.1
Std RPKM: 5
Median RPKM: 20.4
GTEX-TSE9-3026-SM-3DB76 39.0
GTEX-PVOW-2526-SM-2XCF7 29.1
GTEX-13SLX-3126-SM-5S2Q5 28.9
GTEX-QMR6-1426-SM-32PLA 28.3
GTEX-WWYW-3126-SM-3NB39 28.0
GTEX-RNOR-2326-SM-2TF4I 27.3
GTEX-T2IS-3026-SM-32QPM 27.3
GTEX-UTHO-3026-SM-3GAFB 26.9
GTEX-WVLH-3026-SM-3MJG9 26.9
GTEX-145LS-3126-SM-5Q5BY 25.9
GTEX-NPJ8-1526-SM-2D7VU 25.9
GTEX-T6MN-2626-SM-32PMQ 25.7
GTEX-WHSE-3026-SM-3P5ZH 25.6
GTEX-WL46-2926-SM-3LK82 25.6
GTEX-13FXS-3126-SM-5J2NN 25.4
GTEX-Y111-2726-SM-4TT3N 24.8
GTEX-14BMV-3026-SM-5S2PQ 24.4
GTEX-1313W-3126-SM-5LZUI 24.3
GTEX-13NYC-2826-SM-5K7WR 24.3
GTEX-13OW8-2826-SM-5L3GC 24.3
GTEX-WZTO-2926-SM-3NM9I 23.8
GTEX-YFC4-3126-SM-5PNV6 23.8
GTEX-13JVG-3126-SM-5L3FH 23.4
GTEX-XOTO-3026-SM-4B65M 23.4
GTEX-145MH-3026-SM-5Q5DZ 23.3
GTEX-14ASI-3026-SM-5S2PN 23.2
GTEX-12WSC-3026-SM-5GCNF 23.1
GTEX-117XS-3026-SM-5N9CA 23.0
GTEX-ZUA1-3026-SM-59HJC 22.9
GTEX-1128S-2726-SM-5H12C 22.8
GTEX-11DXY-3226-SM-5GIDE 22.8
GTEX-T5JC-2426-SM-3NMDB 22.7
GTEX-X585-3026-SM-46MWF 22.7
GTEX-ZAK1-3026-SM-5S2MJ 22.7
GTEX-ZYFD-3026-SM-5E44C 22.7
GTEX-12ZZX-2926-SM-5GCOQ 22.6
GTEX-13O3Q-2926-SM-5KM45 22.6
GTEX-11ZUS-2926-SM-5FQSL 22.5
GTEX-13VXU-2926-SM-5LU5C 22.5
GTEX-131YS-3126-SM-5KLYT 22.4
GTEX-11ONC-2926-SM-5P9JM 22.3
GTEX-Y8DK-0826-SM-4TT3T 22.2
GTEX-12ZZY-3026-SM-5GCOU 22.0
GTEX-144GL-3026-SM-5Q5CW 22.0
GTEX-13FHO-3026-SM-5J1O9 21.9
GTEX-11GSO-2926-SM-5HL73 21.8
GTEX-13OW6-3026-SM-5J2MI 21.8
GTEX-11OF3-2926-SM-5HL78 21.7
GTEX-13FLW-1426-SM-5K7YE 21.7
GTEX-11NUK-2926-SM-5A5MD 21.6
GTEX-12126-1026-SM-5P9JJ 21.4
GTEX-YJ89-3026-SM-5IFJI 21.4
GTEX-145MF-2726-SM-5O995 21.3
GTEX-11PRG-2926-SM-5987A 21.0
GTEX-111FC-3126-SM-5GZZ2 20.5
GTEX-13NYS-3126-SM-5KLYV 20.5
GTEX-13OVH-3026-SM-5MR4N 20.5
GTEX-X4XX-3026-SM-3NMB2 20.2
GTEX-11DXW-1126-SM-5H12Q 20.0
GTEX-145MG-3026-SM-5RQJA 19.9
GTEX-13O3O-3126-SM-5KM3H 19.7
GTEX-13PL6-3126-SM-5LUAR 19.5
GTEX-QDT8-2926-SM-32PKC 19.5
GTEX-1192X-3126-SM-5N9BY 19.3
GTEX-QVJO-1426-SM-2S1QY 19.1
GTEX-132Q8-3026-SM-5PNVG 18.9
GTEX-Q2AG-2926-SM-2HMJ3 18.9
GTEX-OXRN-2426-SM-2I5EQ 18.8
GTEX-12ZZW-2926-SM-5LZUP 18.5
GTEX-11GS4-3126-SM-5A5LH 18.4
GTEX-13X6J-3026-SM-5Q5CU 18.1
GTEX-R55F-1326-SM-5S2V4 17.9
GTEX-13FHP-3026-SM-5IJBS 17.7
GTEX-14A5I-2926-SM-5Q5CQ 17.6
GTEX-XLM4-3026-SM-4AT6L 17.6
GTEX-11NV4-2126-SM-5N9DS 17.4
GTEX-13G51-3026-SM-5IJB8 17.4
GTEX-1117F-3226-SM-5N9CT 17.0
GTEX-ZAJG-3126-SM-5HL9J 16.9
GTEX-12WSH-3026-SM-5CVNI 16.8
GTEX-13JUV-2926-SM-5LZX7 16.8
GTEX-11OC5-0726-SM-5P9JK 16.6
GTEX-ZZPT-3026-SM-5GZXH 16.6
GTEX-11WQK-3026-SM-5EQL6 16.5
GTEX-13QIC-2926-SM-5J2NF 16.4
GTEX-RU72-3026-SM-5SI7Y 16.3
GTEX-12ZZZ-3026-SM-5BC67 16.2
GTEX-1399T-3026-SM-5KLZC 16.0
GTEX-ZE7O-3126-SM-5HL5X 15.5
GTEX-QVUS-2826-SM-3GADB 15.4
GTEX-11EMC-3226-SM-5EGKW 15.2
GTEX-11EI6-3026-SM-5GZZO 15.1
GTEX-ZVT3-3026-SM-5E43N 14.9
GTEX-Z93S-2926-SM-57WB9 14.8
GTEX-139T8-1026-SM-5J2MC 14.7
GTEX-13NYB-3026-SM-5IJD7 14.7
GTEX-13S7M-3126-SM-5RQJQ 14.5
GTEX-NPJ7-2726-SM-2I3FT 14.4
GTEX-13X6K-2926-SM-5Q5D5 14.3
GTEX-13OVJ-2826-SM-5L3GW 14.0
GTEX-13PVQ-3026-SM-5SI93 13.5
GTEX-13OW7-3026-SM-5L3GY 13.2
GTEX-147GR-3026-SM-5S2ML 13.1
GTEX-131XW-3126-SM-5LZUC 13.0
GTEX-N7MT-1126-SM-5SI7V 13.0
GTEX-11O72-2926-SM-5BC4V 12.9
GTEX-12WSD-3126-SM-5HL7P 12.7
GTEX-13IVO-2926-SM-5L3CZ 12.3
GTEX-144FL-3026-SM-5O99C 11.3
GTEX-12WSA-2926-SM-5EQ4D 10.4
GTEX-11GSP-3226-SM-5986O 10.3
GTEX-PWO3-0926-SM-2I5EY 9.7
GTEX-11TTK-2926-SM-5PNYP 9.3
GTEX-1445S-3026-SM-5O9BR 9.1
Show all
15.121.825.35.433.4051015202530
 
15.121.825.35.433.4051015202530

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 20.6
Samples: 108

Max RPKM: 33.4
Min RPKM: 5.4
Std RPKM: 6.5
Median RPKM: 21.8
GTEX-NL3H-0011-R10A-SM-2I3E9 33.4
GTEX-WL46-0011-R10A-SM-3MJFQ 32.0
GTEX-S7SE-0011-R10A-SM-2XCDF 31.7
GTEX-T6MN-0011-R10A-SM-32QP7 31.7
GTEX-TSE9-0011-R10A-SM-3DB7O 31.3
GTEX-Q2AG-0011-R10A-SM-2HMLA 31.1
GTEX-X585-0011-R10A-SM-46MUY 31.1
GTEX-WVLH-0011-R10A-SM-3MJFM 30.3
GTEX-WZTO-0011-R10B-SM-4E3KB 29.4
GTEX-YFC4-0011-R10a-SM-4SOK5 29.3
GTEX-145MH-0011-R10b-SM-5PNUK 28.6
GTEX-12WSE-0011-R10b-SM-5P9JV 28.1
GTEX-13N1W-0011-R10b-SM-5MR4H 27.9
GTEX-131YS-0011-R10b-SM-5EQ5N 27.8
GTEX-YJ89-0011-R10a-SM-4SOK9 27.7
GTEX-QDT8-0011-R10A-SM-32PKG 27.6
GTEX-145MG-0011-R10a-SM-5PNWG 26.9
GTEX-Y8DK-0011-R10A-SM-4SOK1 26.9
GTEX-12WSC-0011-R10a-SM-5GU57 26.8
GTEX-1313W-0011-R10b-SM-5DUXA 26.8
GTEX-NPJ8-0011-R10A-SM-2YUMO 26.8
GTEX-13O3Q-0011-R10b-SM-5KM39 26.7
GTEX-12WSF-0011-R10a-SM-5LZVH 26.6
GTEX-131XH-0011-R10a-SM-5EGLJ 26.3
GTEX-13X6K-0011-R10a-SM-5P9JR 26.3
GTEX-14ASI-0011-R10b-SM-5S2VZ 26.2
GTEX-13FLW-0011-R10b-SM-5LZZF 25.4
GTEX-13RTJ-0011-R10b-SM-5O9CW 25.3
GTEX-T5JC-0011-R10A-SM-32PM2 25.3
GTEX-WWYW-0011-R10A-SM-3NB35 25.2
GTEX-X4XX-0011-R10B-SM-46MWO 25.1
GTEX-13FXS-0011-R10a-SM-5J2MA 24.9
GTEX-13OW7-0011-R10a-SM-5L3H3 24.8
GTEX-13SLX-0011-R10a-SM-5P9HV 24.8
GTEX-N7MS-0011-R10A-SM-2HMJK 24.2
GTEX-13NYS-0011-R10a-SM-5MR4S 24.0
GTEX-12ZZX-0011-R10b-SM-5DUWK 23.9
GTEX-QVUS-0011-R10A-SM-3GIK3 23.8
GTEX-14BIN-0011-R10a-SM-5S2UA 23.7
GTEX-QVJO-0011-R10A-SM-2S1QJ 23.7
GTEX-13QIC-0011-R10a-SM-5O9C7 23.4
GTEX-QMR6-0011-R10A-SM-32PKO 23.1
GTEX-13X6J-0011-R10b-SM-5PNWA 23.0
GTEX-11H98-0011-R10b-SM-5NQ98 22.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC 22.6
GTEX-145LS-0011-R10a-SM-5PNUQ 22.6
GTEX-13O3O-0011-R10a-SM-5LUA9 22.5
GTEX-12ZZY-0011-R10b-SM-5HL7W 22.4
GTEX-147GR-0011-R10b-SM-5S2UM 22.4
GTEX-XLM4-0011-R10A-SM-4AT5P 22.3
GTEX-13S7M-0011-R10b-SM-5PNZB 22.1
GTEX-ZF28-0011-R10a-SM-4WWEH 22.0
GTEX-13G51-0011-R10b-SM-5LZYF 21.9
GTEX-12WSM-0011-R10a-SM-5DUWV 21.8
GTEX-13FHO-0011-R10b-SM-5J2MM 21.7
GTEX-13CZV-0011-R10b-SM-5LZYD 21.6
GTEX-13OVL-0011-R10a-SM-5L3GS 21.5
GTEX-13OW6-0011-R10a-SM-5L3HE 21.5
GTEX-ZVZQ-0011-R10b-SM-51MRT 21.4
GTEX-NPJ7-0011-R10A-SM-2I3E5 21.1
GTEX-13JUV-0011-R10b-SM-5LZXR 20.6
GTEX-132Q8-0011-R10b-SM-5DUWZ 20.4
GTEX-14BIL-0011-R10a-SM-5SI75 20.4
GTEX-13FLV-0011-R10b-SM-5LZZ2 20.2
GTEX-13OW8-0011-R10a-SM-5L3H6 20.1
GTEX-N7MT-0011-R10A-SM-2I3E1 20.0
GTEX-12126-0011-R10b-SM-5BC6T 19.8
GTEX-12WSH-0011-R10a-SM-5LZUS 19.8
GTEX-XMD1-0011-R10A-SM-4AT4A 19.5
GTEX-ZAB4-0011-R10a-SM-4SOKH 19.3
GTEX-13QJC-0011-R10a-SM-5SI63 18.3
GTEX-P44H-0011-R10A-SM-2XCEK 18.0
GTEX-OXRN-0011-R10A-SM-2I5GC 17.8
GTEX-11ZUS-0011-R10b-SM-5BC79 17.5
GTEX-13X6I-0011-R10a-SM-5PNWI 17.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 17.3
GTEX-147F4-0011-R10b-SM-5S2WC 15.9
GTEX-Z93S-0011-R10a-SM-4RGNM 15.6
GTEX-X4EP-0011-R10B-SM-4QASJ 15.5
GTEX-ZVT3-0011-R10b-SM-57WB6 15.2
GTEX-ZUA1-0011-R10a-SM-51MT6 15.1
GTEX-NL4W-0011-R10A-SM-2I3DY 14.9
GTEX-13SLW-0011-R10a-SM-5S2UI 14.7
GTEX-145LU-0011-R10a-SM-5PNWJ 14.6
GTEX-RVPU-0011-R10A-SM-2XCAH 14.5
GTEX-139TS-0011-R10a-SM-5K7TU 14.1
GTEX-13JVG-0011-R10b-SM-5KM2P 14.0
GTEX-11WQC-0011-R10a-SM-57WCT 13.8
GTEX-11WQK-0011-R10a-SM-5BC6R 13.7
GTEX-13OVJ-0011-R10b-SM-5L3HT 12.9
GTEX-ZXG5-0011-R10a-SM-57WDD 12.7
GTEX-13NYB-0011-R10a-SM-5KM43 12.4
GTEX-12WSD-0011-R10b-SM-5GU79 12.3
GTEX-13FTZ-0011-R10b-SM-5KLZS 12.3
GTEX-12ZZW-0011-R10b-SM-5HL9X 12.2
GTEX-13N2G-0011-R10a-SM-5MR34 12.2
GTEX-1477Z-0011-R10b-SM-5S2RF 11.4
GTEX-12WSA-0011-R10b-SM-5P9ET 10.9
GTEX-11GSP-0011-R10a-SM-5NQ7J 10.8
GTEX-13NZA-0011-R10b-SM-5KM54 10.1
GTEX-X261-0011-R10B-SM-4E3JT 10.0
GTEX-ZE7O-0011-R10a-SM-57WAZ 9.8
GTEX-OXRO-0011-R10A-SM-2I5EH 9.7
GTEX-13IVO-0011-R10a-SM-5LZY3 8.8
GTEX-14753-0011-R10b-SM-5S2WE 8.1
GTEX-1445S-0011-R10a-SM-5PNWB 7.4
GTEX-ZV68-0011-R10a-SM-51MT7 7.2
GTEX-131XW-0011-R10a-SM-5DUVA 5.4
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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