Fields »
ABOUT
HELP
BLOG
FAH

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:107.3TPM
GTEx:18.0RPKM
FANTOM5:66.3Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA041370

  

Antibody HPA044093

  

Adipocytes

 Not detected   Low  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
Chondrocytes:Not detected
 
 

Antibody staining

Antibody HPA041370

  

Antibody HPA044093

  

Adipocytes

 Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  

Chondrocytes

 Not detected  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

107.3
N/A Female, age 80
Sample 1
TPM: 126.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 137.6
N/A Female, age 57
Sample 3
TPM: 134.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 56.1
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 82.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

18.0

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 17.8
Samples: 350

Max RPKM: 51.1
Min RPKM: 1.8
Std RPKM: 9.8
Median RPKM: 16.1
GTEX-YB5E-2126-SM-5IFI7 51.1
GTEX-ZPCL-2126-SM-57WFZ 51.1
GTEX-WY7C-2426-SM-3NB2V 50.6
GTEX-11EM3-2326-SM-5H12B 49.8
GTEX-R55G-2426-SM-2TC5I 44.9
GTEX-ZZPU-2726-SM-5NQ8O 44.8
GTEX-XUZC-1826-SM-4BRVO 44.4
GTEX-Y5V6-2526-SM-5IFJV 44.3
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 18.3
Samples: 227

Max RPKM: 54
Min RPKM: 1.1
Std RPKM: 11.4
Median RPKM: 16.1
GTEX-11EQ9-1126-SM-5987I 54.0
GTEX-ZLWG-0726-SM-5S2NG 52.6
GTEX-ZPCL-1026-SM-5GCOX 51.6
GTEX-W5X1-1426-SM-3GIKH 50.8
GTEX-11I78-0226-SM-5HL6R 46.7
GTEX-13FTW-0426-SM-5K7X2 46.7
GTEX-139YR-0326-SM-5J1MC 44.8
GTEX-1122O-0926-SM-5N9C9 44.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

66.3

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 66.3
FF:10010-101C1 65,65,76 years, mixed 66.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.