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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:7.4TPM
GTEx:15.2RPKM
FANTOM5:19.2Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Peripheral nerve:Not detected
Chondrocytes:Not detected
Fibroblasts:Low
 

Antibody staining

Antibody HPA001249

  

Antibody CAB004447

  

Adipocytes

 Not detected   Low  

Peripheral nerve

 Not detected   Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Low  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA001249

  

Antibody CAB004447

  

Adipocytes

 Not detected   Low  

Chondrocytes

 Low  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Low  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

7.4
N/A Female, age 80
Sample 1
TPM: 4.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 3.1
N/A Female, age 57
Sample 3
TPM: 4.9
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 13.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 10.6
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

15.2

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 16.3
Samples: 350

Max RPKM: 27
Min RPKM: 7.9
Std RPKM: 3.3
Median RPKM: 16.4
GTEX-11EQ8-0226-SM-5EQ5G 27.0
GTEX-13PDP-0226-SM-5K7W9 26.1
GTEX-12WSA-0326-SM-5BC6I 25.5
GTEX-ZXG5-0226-SM-59HJI 23.9
GTEX-RM2N-1726-SM-2TF55 23.7
GTEX-11P81-2426-SM-5GU65 23.5
GTEX-YEC3-1226-SM-5IFI8 23.4
GTEX-12WSB-0226-SM-5GCOR 22.9
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 13.6
Samples: 227

Max RPKM: 28.5
Min RPKM: 6.7
Std RPKM: 3.6
Median RPKM: 13.3
GTEX-14A6H-1026-SM-5SIAZ 28.5
GTEX-13O3P-0926-SM-5IFFI 26.1
GTEX-11GS4-1026-SM-5N9DE 24.4
GTEX-13S7M-0826-SM-5QGQX 22.6
GTEX-11DXY-0326-SM-5H12F 21.9
GTEX-11NUK-2026-SM-5PNVZ 21.3
GTEX-132Q8-1726-SM-5EGK8 21.2
GTEX-ZE7O-1526-SM-5J1NH 20.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

19.2

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 19.2
FF:10010-101C1 65,65,76 years, mixed 19.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.