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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:2.8TPM
GTEx:19.5RPKM
FANTOM5:26.2Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody HPA001249

 

Antibody CAB004447

 

Glandular cells

Not detected   Medium  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

2.8

overview Male, age 65
Sample 1
TPM: 4.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 3.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 0.3
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 3.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

19.5

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 19.5
Samples: 88

Max RPKM: 41.4
Min RPKM: 10.4
Std RPKM: 6.6
Median RPKM: 17.6
GTEX-VUSG-1726-SM-4KKZL 41.4
GTEX-UPK5-2026-SM-4JBIM 37.1
GTEX-ZC5H-2326-SM-4WAYT 36.7
GTEX-11NSD-1726-SM-5N9C3 31.8
GTEX-11XUK-1426-SM-5EQMG 31.7
GTEX-WFJO-0926-SM-4LVM2 30.7
GTEX-13O61-1326-SM-5KM31 30.2
GTEX-ZLFU-1526-SM-4WWBT 30.1
GTEX-12BJ1-1926-SM-5HL9Z 28.7
GTEX-11VI4-1626-SM-5EQKO 28.3
GTEX-WH7G-1626-SM-4LVMY 28.1
GTEX-1399U-2126-SM-5IFEZ 28.0
GTEX-Z9EW-0926-SM-5CVMM 26.8
GTEX-X15G-1426-SM-4PQZK 26.6
GTEX-131XG-1726-SM-5LZUR 26.2
GTEX-13QBU-1926-SM-5IJEW 26.0
GTEX-145ME-0926-SM-5O9AR 25.4
GTEX-XAJ8-0526-SM-47JYK 25.2
GTEX-148VJ-2226-SM-5NQ9M 25.1
GTEX-ZEX8-1826-SM-57WBH 25.0
GTEX-ZVP2-1726-SM-5GU5P 24.4
GTEX-13FH7-1226-SM-5IJFK 24.4
GTEX-14E6E-1626-SM-5RQI7 24.4
GTEX-WRHK-1026-SM-4MVOD 23.9
GTEX-13O21-1026-SM-5IJDU 22.7
GTEX-133LE-1426-SM-5IFH1 22.6
GTEX-ZP4G-1626-SM-57WGD 21.8
GTEX-11P82-0826-SM-5P9GU 21.8
GTEX-1399S-2026-SM-5KM4B 21.5
GTEX-11I78-1126-SM-5A5K5 21.1
GTEX-11P7K-1626-SM-5GU63 21.0
GTEX-ZQG8-2526-SM-57WEQ 21.0
GTEX-11DXZ-1326-SM-5H11X 21.0
GTEX-11DXX-1626-SM-5H11H 20.5
GTEX-WQUQ-2426-SM-4MVNW 20.3
GTEX-1192X-2526-SM-59868 19.9
GTEX-ZYWO-1526-SM-5SIAL 19.9
GTEX-XXEK-1026-SM-4BRUW 19.5
GTEX-ZVT2-2126-SM-5NQ93 18.8
GTEX-ZTPG-2626-SM-57WFX 18.4
GTEX-13CF3-1226-SM-5LZXN 18.2
GTEX-13RTK-0826-SM-5Q5C6 18.1
GTEX-ZZ64-0526-SM-5GZXM 18.0
GTEX-1399R-2026-SM-5K7WN 17.6
GTEX-13OVI-1926-SM-5IJCG 17.5
GTEX-ZVZP-1826-SM-5GZXB 17.2
GTEX-139T6-1026-SM-5IJGC 17.2
GTEX-13113-1226-SM-5EGHT 16.9
GTEX-VJYA-0926-SM-4KL1N 16.7
GTEX-13111-1426-SM-5DUW3 16.5
GTEX-XUZC-1426-SM-4BRV3 16.5
GTEX-11EQ9-1326-SM-5985X 16.3
GTEX-131XF-1326-SM-5GCMQ 16.2
GTEX-139YR-2226-SM-5IFFW 16.2
GTEX-XGQ4-1326-SM-4GIDU 16.2
GTEX-WFG7-1726-SM-4LVME 16.0
GTEX-Y5LM-1626-SM-4VDTB 16.0
GTEX-Y114-1426-SM-4TT6W 15.7
GTEX-YF7O-1826-SM-5IFIU 15.3
GTEX-XBED-1426-SM-4AT4G 15.2
GTEX-ZTSS-0926-SM-59865 14.8
GTEX-WEY5-1526-SM-4LMJF 14.4
GTEX-12WSK-1526-SM-5CVNO 14.4
GTEX-ZXES-1526-SM-5NQ95 14.3
GTEX-YB5E-1526-SM-5IFIE 14.1
GTEX-ZLV1-1126-SM-4WWBW 14.1
GTEX-X5EB-1626-SM-4E3IV 14.1
GTEX-117YX-0326-SM-5GICL 13.9
GTEX-XMK1-1826-SM-4B66F 13.9
GTEX-13PL7-2626-SM-5IFH4 13.8
GTEX-1122O-1326-SM-5H11F 13.8
GTEX-ZA64-1226-SM-5HL7B 13.6
GTEX-ZYFG-2026-SM-5E43Y 13.4
GTEX-ZTX8-0526-SM-59HLD 13.4
GTEX-Y9LG-1626-SM-5IFHM 13.2
GTEX-111CU-1326-SM-5NQ8L 13.1
GTEX-ZF2S-1726-SM-57WFT 12.8
GTEX-145LT-1026-SM-5LU9O 12.8
GTEX-ZPIC-2326-SM-57WDW 12.7
GTEX-WFG8-1626-SM-4LVMB 12.4
GTEX-ZPCL-1726-SM-57WEO 12.3
GTEX-13FTW-2026-SM-5IJE2 11.9
GTEX-YEC4-1726-SM-4W21E 11.9
GTEX-13D11-0726-SM-5LZZB 11.7
GTEX-14DAR-1426-SM-5RQIR 11.2
GTEX-ZQUD-0926-SM-57WE3 11.0
GTEX-Y3IK-1726-SM-4YCCR 10.9
GTEX-111YS-1426-SM-5GID8 10.4
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

26.2

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 26.2
FF:10024-101D6 15,40,85 years, mixed 26.2

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The Human Protein Atlas project is funded
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