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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:73.9TPM
GTEx:20.8RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Low
Neuronal cells:High
Neuropil:Low
 

Antibody staining

Antibody HPA022838

 

Endothelial cells

Not detected  

Glial cells

Low  

Neuronal cells

High  

Neuropil

Low  
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

73.9

N/A Male, age 5
Sample 1
TPM: 68.5
overview Female, age 40
Sample 2
TPM: 76.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 76.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

20.8

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 20.3
Samples: 114

Max RPKM: 41.4
Min RPKM: 11.8
Std RPKM: 4.3
Median RPKM: 19.9
GTEX-13G51-3026-SM-5IJB8 41.4
GTEX-UTHO-3026-SM-3GAFB 30.5
GTEX-N7MT-1126-SM-5SI7V 29.8
GTEX-1192X-3126-SM-5N9BY 29.5
GTEX-QVUS-2826-SM-3GADB 29.3
GTEX-13FHO-3026-SM-5J1O9 28.2
GTEX-139T8-1026-SM-5J2MC 27.5
GTEX-11TTK-2926-SM-5PNYP 27.1
GTEX-PWO3-0926-SM-2I5EY 26.9
GTEX-1445S-3026-SM-5O9BR 26.6
GTEX-111FC-3126-SM-5GZZ2 26.4
GTEX-QDT8-2926-SM-32PKC 25.4
GTEX-144FL-3026-SM-5O99C 24.9
GTEX-ZE7O-3126-SM-5HL5X 24.8
GTEX-13NYB-3026-SM-5IJD7 24.7
GTEX-11OC5-0726-SM-5P9JK 24.5
GTEX-QMR6-1426-SM-32PLA 24.3
GTEX-RU72-3026-SM-5SI7Y 24.3
GTEX-14A5I-2926-SM-5Q5CQ 24.1
GTEX-11GSP-3226-SM-5986O 23.9
GTEX-XLM4-3026-SM-4AT6L 23.6
GTEX-13NYC-2826-SM-5K7WR 23.2
GTEX-12ZZZ-3026-SM-5BC67 23.1
GTEX-QVJO-1426-SM-2S1QY 23.1
GTEX-12ZZY-3026-SM-5GCOU 23.0
GTEX-132Q8-3026-SM-5PNVG 22.8
GTEX-13OVJ-2826-SM-5L3GW 22.6
GTEX-13JUV-2926-SM-5LZX7 22.5
GTEX-NPJ7-2726-SM-2I3FT 22.5
GTEX-1128S-2726-SM-5H12C 22.4
GTEX-13FLW-1426-SM-5K7YE 22.3
GTEX-13FHP-3026-SM-5IJBS 22.2
GTEX-13OW7-3026-SM-5L3GY 22.2
GTEX-13X6K-2926-SM-5Q5D5 22.2
GTEX-11GS4-3126-SM-5A5LH 22.1
GTEX-X585-3026-SM-46MWF 22.1
GTEX-13NYS-3126-SM-5KLYV 22.0
GTEX-11EI6-3026-SM-5GZZO 21.7
GTEX-13QIC-2926-SM-5J2NF 21.5
GTEX-OXRN-2426-SM-2I5EQ 21.4
GTEX-ZAK1-3026-SM-5S2MJ 21.4
GTEX-147GR-3026-SM-5S2ML 21.1
GTEX-11WQK-3026-SM-5EQL6 21.0
GTEX-13JVG-3126-SM-5L3FH 21.0
GTEX-1117F-3226-SM-5N9CT 20.9
GTEX-11EMC-3226-SM-5EGKW 20.9
GTEX-11DXY-3226-SM-5GIDE 20.6
GTEX-11GSO-2926-SM-5HL73 20.6
GTEX-14ASI-3026-SM-5S2PN 20.6
GTEX-11O72-2926-SM-5BC4V 20.5
GTEX-13OW8-2826-SM-5L3GC 20.5
GTEX-NPJ8-1526-SM-2D7VU 20.5
GTEX-1399T-3026-SM-5KLZC 20.3
GTEX-145MG-3026-SM-5RQJA 20.3
GTEX-145LS-3126-SM-5Q5BY 20.2
GTEX-12WSD-3126-SM-5HL7P 20.0
GTEX-13X6J-3026-SM-5Q5CU 20.0
GTEX-YFC4-3126-SM-5PNV6 19.8
GTEX-131XW-3126-SM-5LZUC 19.7
GTEX-13S7M-3126-SM-5RQJQ 19.6
GTEX-RNOR-2326-SM-2TF4I 19.6
GTEX-11ONC-2926-SM-5P9JM 19.4
GTEX-TSE9-3026-SM-3DB76 19.4
GTEX-WZTO-2926-SM-3NM9I 19.4
GTEX-12ZZW-2926-SM-5LZUP 19.2
GTEX-13OW6-3026-SM-5J2MI 19.2
GTEX-ZVT3-3026-SM-5E43N 19.2
GTEX-13OVH-3026-SM-5MR4N 19.1
GTEX-1313W-3126-SM-5LZUI 19.0
GTEX-13IVO-2926-SM-5L3CZ 18.9
GTEX-11DXW-1126-SM-5H12Q 18.8
GTEX-145MF-2726-SM-5O995 18.8
GTEX-R55F-1326-SM-5S2V4 18.7
GTEX-Y8DK-0826-SM-4TT3T 18.7
GTEX-T5JC-2426-SM-3NMDB 18.5
GTEX-13O3Q-2926-SM-5KM45 18.4
GTEX-T2IS-3026-SM-32QPM 18.4
GTEX-WWYW-3126-SM-3NB39 18.4
GTEX-PVOW-2526-SM-2XCF7 18.3
GTEX-11NUK-2926-SM-5A5MD 17.9
GTEX-WHSE-3026-SM-3P5ZH 17.9
GTEX-13PVQ-3026-SM-5SI93 17.8
GTEX-T6MN-2626-SM-32PMQ 17.5
GTEX-X4XX-3026-SM-3NMB2 17.5
GTEX-11PRG-2926-SM-5987A 17.4
GTEX-14BMV-3026-SM-5S2PQ 17.2
GTEX-WVLH-3026-SM-3MJG9 17.1
GTEX-144GL-3026-SM-5Q5CW 17.0
GTEX-12WSH-3026-SM-5CVNI 16.9
GTEX-131YS-3126-SM-5KLYT 16.9
GTEX-ZUA1-3026-SM-59HJC 16.7
GTEX-ZYFD-3026-SM-5E44C 16.7
GTEX-12WSA-2926-SM-5EQ4D 16.6
GTEX-13PL6-3126-SM-5LUAR 16.6
GTEX-ZAJG-3126-SM-5HL9J 16.4
GTEX-11NV4-2126-SM-5N9DS 16.2
GTEX-13FXS-3126-SM-5J2NN 16.2
GTEX-145MH-3026-SM-5Q5DZ 16.2
GTEX-WL46-2926-SM-3LK82 15.9
GTEX-YJ89-3026-SM-5IFJI 15.9
GTEX-11OF3-2926-SM-5HL78 15.5
GTEX-ZZPT-3026-SM-5GZXH 15.4
GTEX-13O3O-3126-SM-5KM3H 15.3
GTEX-Q2AG-2926-SM-2HMJ3 15.3
GTEX-XOTO-3026-SM-4B65M 15.2
GTEX-12ZZX-2926-SM-5GCOQ 15.1
GTEX-12126-1026-SM-5P9JJ 14.6
GTEX-12WSC-3026-SM-5GCNF 14.6
GTEX-13VXU-2926-SM-5LU5C 14.6
GTEX-13SLX-3126-SM-5S2Q5 14.4
GTEX-Y111-2726-SM-4TT3N 14.3
GTEX-117XS-3026-SM-5N9CA 14.1
GTEX-11ZUS-2926-SM-5FQSL 12.5
GTEX-Z93S-2926-SM-57WB9 11.8
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 21.2
Samples: 108

Max RPKM: 45.8
Min RPKM: 11.7
Std RPKM: 5.5
Median RPKM: 20.1
GTEX-12WSD-0011-R10b-SM-5GU79 45.8
GTEX-XMD1-0011-R10A-SM-4AT4A 42.2
GTEX-X4EP-0011-R10B-SM-4QASJ 36.7
GTEX-ZE7O-0011-R10a-SM-57WAZ 34.6
GTEX-1445S-0011-R10a-SM-5PNWB 32.7
GTEX-QVUS-0011-R10A-SM-3GIK3 31.8
GTEX-QDT8-0011-R10A-SM-32PKG 30.4
GTEX-139TS-0011-R10a-SM-5K7TU 29.6
GTEX-ZAB4-0011-R10a-SM-4SOKH 29.0
GTEX-13JUV-0011-R10b-SM-5LZXR 27.4
GTEX-WWYW-0011-R10A-SM-3NB35 27.0
GTEX-12ZZY-0011-R10b-SM-5HL7W 26.7
GTEX-ZDXO-0011-R10a-SM-4WWD8 26.7
GTEX-QVJO-0011-R10A-SM-2S1QJ 26.1
GTEX-11GSP-0011-R10a-SM-5NQ7J 25.9
GTEX-XLM4-0011-R10A-SM-4AT5P 25.8
GTEX-12ZZW-0011-R10b-SM-5HL9X 25.6
GTEX-13OVJ-0011-R10b-SM-5L3HT 25.3
GTEX-132Q8-0011-R10b-SM-5DUWZ 25.1
GTEX-QMR6-0011-R10A-SM-32PKO 24.4
GTEX-ZV68-0011-R10a-SM-51MT7 24.3
GTEX-11H98-0011-R10b-SM-5NQ98 24.2
GTEX-11ZUS-0011-R10b-SM-5BC79 24.1
GTEX-13FHO-0011-R10b-SM-5J2MM 24.1
GTEX-13FLW-0011-R10b-SM-5LZZF 24.1
GTEX-13SLW-0011-R10a-SM-5S2UI 24.0
GTEX-ZVZQ-0011-R10b-SM-51MRT 23.8
GTEX-13X6I-0011-R10a-SM-5PNWI 23.7
GTEX-14BIL-0011-R10a-SM-5SI75 23.3
GTEX-14753-0011-R10b-SM-5S2WE 23.2
GTEX-ZUA1-0011-R10a-SM-51MT6 22.9
GTEX-S7SE-0011-R10A-SM-2XCDF 22.8
GTEX-145LU-0011-R10a-SM-5PNWJ 22.7
GTEX-13JVG-0011-R10b-SM-5KM2P 22.5
GTEX-WVLH-0011-R10A-SM-3MJFM 22.5
GTEX-13N2G-0011-R10a-SM-5MR34 22.3
GTEX-RVPU-0011-R10A-SM-2XCAH 22.3
GTEX-YFC4-0011-R10a-SM-4SOK5 22.3
GTEX-1477Z-0011-R10b-SM-5S2RF 22.2
GTEX-T5JC-0011-R10A-SM-32PM2 22.2
GTEX-OXRN-0011-R10A-SM-2I5GC 21.9
GTEX-13NYS-0011-R10a-SM-5MR4S 21.8
GTEX-11WQK-0011-R10a-SM-5BC6R 21.6
GTEX-P44H-0011-R10A-SM-2XCEK 21.6
GTEX-11WQC-0011-R10a-SM-57WCT 21.4
GTEX-13OVL-0011-R10a-SM-5L3GS 21.4
GTEX-147F4-0011-R10b-SM-5S2WC 21.3
GTEX-TSE9-0011-R10A-SM-3DB7O 21.2
GTEX-147GR-0011-R10b-SM-5S2UM 21.1
GTEX-12WSA-0011-R10b-SM-5P9ET 20.6
GTEX-13OW8-0011-R10a-SM-5L3H6 20.6
GTEX-NL4W-0011-R10A-SM-2I3DY 20.5
GTEX-ZF28-0011-R10a-SM-4WWEH 20.3
GTEX-13FXS-0011-R10a-SM-5J2MA 20.2
GTEX-T6MN-0011-R10A-SM-32QP7 20.1
GTEX-13RTJ-0011-R10b-SM-5O9CW 19.9
GTEX-13S7M-0011-R10b-SM-5PNZB 19.9
GTEX-ZXG5-0011-R10a-SM-57WDD 19.9
GTEX-145MG-0011-R10a-SM-5PNWG 19.7
GTEX-13CZV-0011-R10b-SM-5LZYD 19.5
GTEX-X4XX-0011-R10B-SM-46MWO 19.5
GTEX-NPJ7-0011-R10A-SM-2I3E5 19.3
GTEX-13O3Q-0011-R10b-SM-5KM39 19.2
GTEX-13X6K-0011-R10a-SM-5P9JR 19.2
GTEX-12126-0011-R10b-SM-5BC6T 19.1
GTEX-13FLV-0011-R10b-SM-5LZZ2 19.1
GTEX-Y8DK-0011-R10A-SM-4SOK1 19.1
GTEX-X585-0011-R10A-SM-46MUY 19.0
GTEX-N7MT-0011-R10A-SM-2I3E1 18.9
GTEX-13QIC-0011-R10a-SM-5O9C7 18.6
GTEX-12WSF-0011-R10a-SM-5LZVH 18.5
GTEX-YJ89-0011-R10a-SM-4SOK9 18.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 18.4
GTEX-13QJC-0011-R10a-SM-5SI63 18.3
GTEX-OXRO-0011-R10A-SM-2I5EH 18.2
GTEX-13G51-0011-R10b-SM-5LZYF 18.0
GTEX-13NYB-0011-R10a-SM-5KM43 18.0
GTEX-131YS-0011-R10b-SM-5EQ5N 17.9
GTEX-13FTZ-0011-R10b-SM-5KLZS 17.9
GTEX-X261-0011-R10B-SM-4E3JT 17.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC 17.7
GTEX-14ASI-0011-R10b-SM-5S2VZ 17.7
GTEX-ZVT3-0011-R10b-SM-57WB6 17.7
GTEX-WZTO-0011-R10B-SM-4E3KB 17.6
GTEX-12WSM-0011-R10a-SM-5DUWV 17.5
GTEX-14BIN-0011-R10a-SM-5S2UA 17.4
GTEX-12WSC-0011-R10a-SM-5GU57 17.0
GTEX-WL46-0011-R10A-SM-3MJFQ 17.0
GTEX-12ZZX-0011-R10b-SM-5DUWK 16.9
GTEX-Z93S-0011-R10a-SM-4RGNM 16.8
GTEX-145LS-0011-R10a-SM-5PNUQ 16.7
GTEX-Q2AG-0011-R10A-SM-2HMLA 16.6
GTEX-13OW6-0011-R10a-SM-5L3HE 16.5
GTEX-12WSH-0011-R10a-SM-5LZUS 16.2
GTEX-131XW-0011-R10a-SM-5DUVA 16.0
GTEX-145MH-0011-R10b-SM-5PNUK 15.9
GTEX-13OW7-0011-R10a-SM-5L3H3 15.4
GTEX-13X6J-0011-R10b-SM-5PNWA 15.4
GTEX-1313W-0011-R10b-SM-5DUXA 15.2
GTEX-131XH-0011-R10a-SM-5EGLJ 15.1
GTEX-13O3O-0011-R10a-SM-5LUA9 14.7
GTEX-N7MS-0011-R10A-SM-2HMJK 14.6
GTEX-NL3H-0011-R10A-SM-2I3E9 14.0
GTEX-13N1W-0011-R10b-SM-5MR4H 13.8
GTEX-12WSE-0011-R10b-SM-5P9JV 13.2
GTEX-13NZA-0011-R10b-SM-5KM54 12.8
GTEX-13SLX-0011-R10a-SM-5P9HV 12.0
GTEX-13IVO-0011-R10a-SM-5LZY3 11.7
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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