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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:48.5RPKM
FANTOM5:123.4Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:High
Neuronal cells:High
 

Antibody staining

Antibody HPA002907

 

Antibody HPA005835

 

Glial cells

Medium   High  

Neuronal cells

Low   High  
   
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

48.5

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 48.5
Samples: 94

Max RPKM: 88.8
Min RPKM: 18.8
Std RPKM: 12.2
Median RPKM: 48.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 88.8
GTEX-13OW5-0011-R1b-SM-5L3GE 75.0
GTEX-144GL-0011-R1a-SM-5PNZ5 71.3
GTEX-13FHO-0011-R1b-SM-5KLZG 71.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 70.5
GTEX-XOTO-0011-R1B-SM-4B65C 70.2
GTEX-13NYS-0011-R1b-SM-5MR55 68.8
GTEX-13N1W-0011-R1b-SM-5MR4T 68.3
GTEX-QVUS-0011-R1A-SM-3GAD2 67.3
GTEX-13FXS-0011-R1a-SM-5K7U6 67.1
GTEX-13JVG-0011-R1a-SM-5KM32 65.4
GTEX-TSE9-0011-R1A-SM-3DB7E 64.2
GTEX-NPJ7-0011-R1a-SM-3GACT 62.2
GTEX-X585-0011-R1B-SM-46MVE 61.9
GTEX-1399T-0011-R1b-SM-5DUWN 61.1
GTEX-12WSH-0011-R1a-SM-5GU5V 58.6
GTEX-13OVL-0011-R1a-SM-5L3H5 57.8
GTEX-139TT-0011-R1a-SM-5LZVD 57.1
GTEX-13N2G-0011-R1b-SM-5MR3G 56.8
GTEX-N7MS-0011-R1a-SM-2HMJG 56.3
GTEX-13NYB-0011-R1b-SM-5KM4F 55.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 55.6
GTEX-P44H-0011-R1A-SM-3NM8J 54.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 53.9
GTEX-145LS-0011-R1b-SM-5PNUP 53.7
GTEX-X4XX-0011-R1B-SM-3P622 53.5
GTEX-13X6I-0011-R1b-SM-5PNZC 53.0
GTEX-13O3O-0011-R1b-SM-5KM2K 52.4
GTEX-QVJO-0011-R1A-SM-2S1QI 52.1
GTEX-ZAB4-0011-R1a-SM-4RGNO 51.8
GTEX-13OW6-0011-R1a-SM-5L3HQ 51.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 51.5
GTEX-PWO3-0011-R1A-SM-2I5EW 51.1
GTEX-QDT8-0011-R1A-SM-32PKS 50.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 50.7
GTEX-12WSF-0011-R1a-SM-5DUVI 50.7
GTEX-T6MN-0011-R1A-SM-32QOY 50.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50.6
GTEX-13OW8-0011-R1a-SM-5L3HI 50.5
GTEX-11UD1-0011-R1b-SM-5BC7D 50.3
GTEX-12WSE-0011-R1b-SM-5GU4V 49.7
GTEX-13G51-0011-R1a-SM-5LZYR 49.5
GTEX-ZUA1-0011-R1a-SM-4YCE2 49.5
GTEX-WZTO-0011-R1B-SM-3NMAR 49.1
GTEX-132Q8-0011-R1a-SM-5EGLK 49.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 48.6
GTEX-1313W-0011-R1b-SM-5EQ4A 48.5
GTEX-YFC4-0011-R1a-SM-4V6EH 47.8
GTEX-13OW7-0011-R1b-SM-5L3HF 47.7
GTEX-12WSM-0011-R1a-SM-5LZW6 47.7
GTEX-12WSD-0011-R1b-SM-5LZVY 47.6
GTEX-N7MT-0011-R1a-SM-5SI7S 47.2
GTEX-13JUV-0011-R1a-SM-5LZY4 47.2
GTEX-WL46-0011-R1A-SM-3LK6M 46.8
GTEX-13QJC-0011-R1b-SM-5S2UU 46.7
GTEX-R55E-0011-R1A-SM-2TC6N 46.5
GTEX-S7SE-0011-R1A-SM-2XCDE 46.3
GTEX-13FLW-0011-R1b-SM-5LZX2 46.0
GTEX-XMD1-0011-R1A-SM-4AT4C 45.8
GTEX-PVOW-0011-R1A-SM-32PL6 45.7
GTEX-QMR6-0011-R1A-SM-32PKW 45.2
GTEX-13SLW-0011-R1a-SM-5S2W7 45.2
GTEX-WVLH-0011-R1A-SM-4MVOK 44.4
GTEX-NL3H-0011-R1a-SM-48TDJ 44.3
GTEX-11GSO-0011-R1b-SM-57WD3 44.2
GTEX-131XH-0011-R1a-SM-5DUWA 43.7
GTEX-T5JC-0011-R1A-SM-32PM6 43.5
GTEX-12WSB-0011-R1b-SM-5P9EY 43.3
GTEX-131YS-0011-R1a-SM-5DUXC 43.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 43.0
GTEX-145MH-0011-R1b-SM-5PNWY 42.8
GTEX-13S7M-0011-R1b-SM-5PNZE 42.7
GTEX-RNOR-0011-R1A-SM-5SI8F 41.5
GTEX-UTHO-0011-R1A-SM-3GIJO 40.3
GTEX-14ASI-0011-R1b-SM-5S2TY 38.6
GTEX-13112-0011-R1b-SM-5HL7K 38.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 37.7
GTEX-11ZTS-0011-R1a-SM-5BC71 37.3
GTEX-13PDP-0011-R1a-SM-5PNX5 36.1
GTEX-145LU-0011-R1a-SM-5Q5CE 35.1
GTEX-139T8-0011-R1a-SM-5HL75 35.0
GTEX-11ONC-0011-R1a-SM-57WD4 34.5
GTEX-NPJ8-0011-R1a-SM-33HCB 34.5
GTEX-1212Z-0011-R1b-SM-5BC72 33.6
GTEX-ZF28-0011-R1a-SM-4WWD1 33.4
GTEX-13FHP-0011-R1b-SM-5K7XL 32.1
GTEX-ZVZQ-0011-R1a-SM-57WBU 31.0
GTEX-13NZA-0011-R1b-SM-5LUAF 30.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 28.6
GTEX-13CF2-0011-R1a-SM-5LZY1 26.9
GTEX-YJ89-0011-R1a-SM-4RGLS 26.2
GTEX-13FTY-0011-R1a-SM-5LZXE 25.9
GTEX-ZE7O-0011-R1a-SM-57WDM 22.5
GTEX-144GO-0011-R1a-SM-5PNWO 18.8
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

123.4

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 123.4
FF:10153-102I9 76 years, female 158.9
FF:10374-105G5 89 years, female 114.0
FF:10169-103B7 60 years, female 97.4

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