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TISSUE ATLAS PRIMARY DATA KIDNEY
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:150.7TPM
GTEx:156.4RPKM
FANTOM5:218.9Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Low
Cells in tubules:High
 

Antibody staining

Antibody HPA002907

 

Antibody HPA005835

 

Cells in glomeruli

Not detected   Low  

Cells in tubules

High   High  
   
   
   

KIDNEY - HPA RNA-seq

Average TPM

150.7

overview Female, age 58
Sample 1
TPM: 216.4
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 176.0
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 172.1
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 165.8
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 62.6
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 135.0
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 212.4
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 146.3
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 69.4
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

156.4

GTEx sample id

RPKM

 

Kidney - Cortex

Kidney - Cortex
RPKM: 156.4
Samples: 32

Max RPKM: 413.8
Min RPKM: 37.7
Std RPKM: 75.4
Median RPKM: 144.2
GTEX-13NYB-1726-SM-5N9G2 413.8
GTEX-N7MS-1626-SM-3LK5F 326.3
GTEX-11OF3-1326-SM-5N9FJ 241.8
GTEX-QDVN-1626-SM-48TZC 232.1
GTEX-UPIC-1126-SM-4IHLO 222.4
GTEX-1497J-0826-SM-5NQAJ 221.2
GTEX-ZLFU-0926-SM-5P9F8 193.7
GTEX-P4QS-1126-SM-3NMD5 188.0
GTEX-13RTJ-2226-SM-5S2Q1 186.3
GTEX-13OW6-1826-SM-5N9F9 177.4
GTEX-XPVG-0526-SM-4B65N 175.8
GTEX-ZYFG-1626-SM-5GZYY 175.1
GTEX-1399S-0526-SM-5IJG8 168.5
GTEX-ZVZP-0926-SM-5GIDB 160.9
GTEX-ZYT6-2226-SM-5GIC9 153.7
GTEX-13OVI-1126-SM-5KLZF 149.7
GTEX-145MN-0326-SM-5QGQI 138.8
GTEX-T5JC-1526-SM-4DM68 136.2
GTEX-Y5V6-2026-SM-5IFHO 136.0
GTEX-12WSG-0826-SM-5EQ5A 127.1
GTEX-13OVL-1826-SM-5KLZR 116.8
GTEX-NPJ8-2226-SM-3TW8D 113.1
GTEX-12696-0926-SM-5FQTV 112.6
GTEX-13112-2126-SM-5GCO4 107.1
GTEX-ZC5H-1726-SM-5HL7X 97.7
GTEX-RN64-1626-SM-48FD7 97.3
GTEX-13O1R-2526-SM-5N9FW 97.1
GTEX-147F4-2626-SM-5Q5CS 82.1
GTEX-11GS4-2326-SM-5A5KS 77.4
GTEX-11TTK-1926-SM-5PNW8 76.5
GTEX-QLQW-1626-SM-4R1K1 66.0
GTEX-ZYFD-1526-SM-5NQ7T 37.7
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

218.9

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 218.9
FF:10017-101C8 60,62,63 years, female 218.9

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