Tissue expression of CCDC130 - Staining in skin

SKIN - Expression summary

Protein expression

RNA expression

HPA:	17.4	TPM
GTEx:	18.6	RPKM

SKIN 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Medium
Keratinocytes:	High
Langerhans:	High
Melanocytes:	Low

Antibody staining	Antibody HPA056977
Fibroblasts	Medium
Keratinocytes	High
Langerhans	High
Melanocytes	Low

SKIN 2 - Annotated protein expression

Annotated protein
expression

Epidermal cells:	High

Antibody staining	Antibody HPA056977
Epidermal cells	High

SKIN - HPA RNA-seq

Average TPM	17.4

Female, age 34

Sample 1
TPM: 14.6

Cell types%

Keratinocytes: 60
Other cell types: 40

Female, age 30

Sample 2
TPM: 9.7

Cell types%

Keratinocytes: 55
Other cell types: 45

Male, age 57

Sample 3
TPM: 28.0

SKIN - GTEx RNA-seq

Average RPKM	18.6

GTEx sample id

RPKM

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 18.5

Samples: 250

Max RPKM: 31.8
Min RPKM: 10
Std RPKM: 3.7
Median RPKM: 18.2

GTEX-ZTSS-1426-SM-5985P

31.8

GTEX-XPVG-2126-SM-4B667

31.3

GTEX-Y5V6-2326-SM-4VDSA

30.8

GTEX-XBEC-0726-SM-4QARZ

29.8

GTEX-12WSA-0426-SM-5EQ5X

28.8

GTEX-ZVTK-0226-SM-51MRG

27.6

GTEX-11TT1-1826-SM-5EQLV

27.3

GTEX-XOT4-0626-SM-4B66L

26.3

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Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 18.6

Samples: 357

Max RPKM: 36.5
Min RPKM: 9.7
Std RPKM: 3.9
Median RPKM: 18.1

GTEX-OXRL-0126-SM-2YUMP

36.5

GTEX-UPIC-1626-SM-4IHKT

31.7

GTEX-U3ZM-1526-SM-3DB9D

30.7

GTEX-P4PQ-0126-SM-2S1NM

30.1

GTEX-111CU-1926-SM-5GZYZ

29.8

GTEX-Y5V6-2426-SM-4VDSB

29.8

GTEX-U3ZN-2326-SM-3DB7W

29.6

GTEX-Y8LW-1826-SM-5S2MV

29.4

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SKIN - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue