Tissue expression of SNAPC2 - Summary - The Human Protein Atlas

GENERAL INFORMATION
Gene name	SNAPC2
Gene description	Small nuclear RNA activating complex, polypeptide 2, 45kDa
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	3
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Expressed in all
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

DATA RELIABILITY
Reliability score	Pending normal tissue annotation.

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

N/A

Cerebral cortex

N/A

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

N/A

Thyroid gland

N/A

Parathyroid gland

N/A

Adrenal gland

N/A

Bone marrow & immune system

N/A

Appendix

N/A

Bone marrow

N/A

Lymph node

N/A

Tonsil

N/A

Spleen

N/A

Muscle tissues

N/A

Heart muscle

N/A

Skeletal muscle

N/A

Smooth muscle

N/A

Lung

N/A

Nasopharynx

N/A

Bronchus

N/A

Lung

N/A

Liver & gallbladder

N/A

Liver

N/A

Gallbladder

N/A

Pancreas

N/A

Pancreas

N/A

Gastrointestinal tract

N/A

Oral mucosa

N/A

Salivary gland

N/A

Esophagus

N/A

Stomach

N/A

Duodenum

N/A

Small intestine

N/A

Colon

N/A

Rectum

N/A

Kidney & urinary bladder

N/A

Kidney

N/A

Urinary bladder

N/A

Male tissues

N/A

Testis

N/A

Epididymis

N/A

Prostate

N/A

Seminal vesicle

N/A

Female tissues

N/A

Breast

N/A

Vagina

N/A

Cervix, uterine

N/A

Endometrium

N/A

Fallopian tube

N/A

Ovary

N/A

Placenta

N/A

Adipose & soft tissue

N/A

Adipose tissue

N/A

Soft tissue

N/A

Skin

N/A

Skin

N/A

PROTEIN EXPRESSION OVERVIEW
Pending normal tissue annotation.

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	SNAPC2 (HGNC Symbol)
Synonyms	PTFdelta, SNAP45
Description	Small nuclear RNA activating complex, polypeptide 2, 45kDa (HGNC Symbol)
Entrez gene summary	This gene encodes a subunit of the snRNA-activating protein complex which is associated with the TATA box-binding protein. The encoded protein is necessary for RNA polymerase II and III dependent small-nuclear RNA gene transcription. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2009]
Chromosome	19
Cytoband	p13.2
Chromosome location (bp)	7920316 - 7923250
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000104976 (version 83.38)
Entrez gene	6618
UniProt	Q13487 (UniProt - Evidence at protein level)
neXtProt	NX_Q13487
Antibodypedia	SNAPC2 antibodies

PROTEIN BROWSER

SNAPC2-001	SNAPC2-002	SNAPC2-006

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
SNAPC2-001 ENSP00000221573 ENST00000221573	Q13487 [Direct mapping] snRNA-activating protein complex subunit 2 Show all	Predicted intracellular proteins Show all	GO:0003700 [transcription factor activity, sequence-specific DNA binding] GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] GO:0006355 [regulation of transcription, DNA-templated] GO:0006366 [transcription from RNA polymerase II promoter] GO:0006383 [transcription from RNA polymerase III promoter] GO:0009301 [snRNA transcription] GO:0010467 [gene expression] Show all	334 aa 35.6 kDa	No	0
SNAPC2-002 ENSP00000471962 ENST00000597584	M0R1L8 [Direct mapping] snRNA-activating protein complex subunit 2 Show all	Predicted intracellular proteins Show all	GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] Show all	97 aa 10.1 kDa	No	0
SNAPC2-006 ENSP00000469475 ENST00000595637	M0QXY9 [Direct mapping] snRNA-activating protein complex subunit 2 Show all	Predicted intracellular proteins Show all		279 aa 29.4 kDa	No	0