We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
TIMM44
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:7.7TPM
GTEx:15.9RPKM
FANTOM5:39.1Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Low
Cells in tubules:High
 

Antibody staining

Antibody HPA043052

 

Cells in glomeruli

Low  

Cells in tubules

High  
 
 

KIDNEY - HPA RNA-seq

Average TPM

7.7

overview Female, age 58
Sample 1
TPM: 18.6
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 11.5
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 12.1
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 12.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 3.5
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 0.1
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 4.0
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 5.8
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 1.3
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

15.9

GTEx sample id

RPKM

 

Kidney - Cortex

Kidney - Cortex
RPKM: 15.9
Samples: 32

Max RPKM: 24.6
Min RPKM: 9.8
Std RPKM: 3.3
Median RPKM: 16.4
GTEX-1497J-0826-SM-5NQAJ 24.6
GTEX-UPIC-1126-SM-4IHLO 21.4
GTEX-ZYFG-1626-SM-5GZYY 20.0
GTEX-QDVN-1626-SM-48TZC 19.6
GTEX-QLQW-1626-SM-4R1K1 19.6
GTEX-12696-0926-SM-5FQTV 19.1
GTEX-P4QS-1126-SM-3NMD5 18.7
GTEX-XPVG-0526-SM-4B65N 18.5
GTEX-145MN-0326-SM-5QGQI 17.9
GTEX-ZLFU-0926-SM-5P9F8 17.8
GTEX-ZYT6-2226-SM-5GIC9 17.7
GTEX-ZVZP-0926-SM-5GIDB 17.0
GTEX-Y5V6-2026-SM-5IFHO 16.9
GTEX-13NYB-1726-SM-5N9G2 16.9
GTEX-12WSG-0826-SM-5EQ5A 16.9
GTEX-13RTJ-2226-SM-5S2Q1 16.6
GTEX-13112-2126-SM-5GCO4 16.3
GTEX-11TTK-1926-SM-5PNW8 15.2
GTEX-RN64-1626-SM-48FD7 15.0
GTEX-N7MS-1626-SM-3LK5F 14.5
GTEX-1399S-0526-SM-5IJG8 14.5
GTEX-ZC5H-1726-SM-5HL7X 13.7
GTEX-11GS4-2326-SM-5A5KS 13.5
GTEX-13OVI-1126-SM-5KLZF 13.3
GTEX-147F4-2626-SM-5Q5CS 13.2
GTEX-11OF3-1326-SM-5N9FJ 13.2
GTEX-T5JC-1526-SM-4DM68 12.9
GTEX-13O1R-2526-SM-5N9FW 12.6
GTEX-13OVL-1826-SM-5KLZR 11.2
GTEX-13OW6-1826-SM-5N9F9 10.8
GTEX-ZYFD-1526-SM-5NQ7T 10.6
GTEX-NPJ8-2226-SM-3TW8D 9.8
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

39.1

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 39.1
FF:10017-101C8 60,62,63 years, female 39.1

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.