Expression of RPS16 in cancer - Summary

CANCER ATLAS

Gene description

Ribosomal protein S16

Protein class

Plasma proteins, Predicted intracellular proteins, Ribosomal proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Liver cancer

STAINING SUMMARY

HPA064222

GENE INFORMATION
Gene name	RPS16 (HGNC Symbol)
Synonyms	S16
Description	Ribosomal protein S16 (HGNC Symbol)
Entrez gene summary	Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S9P family of ribosomal proteins. It is located in the cytoplasm. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]
Chromosome	19
Cytoband	q13.2
Chromosome location (bp)	39433207 - 39435948
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000105193 (version 83.38)
Entrez gene	6217
UniProt	P62249 (UniProt - Evidence at protein level)
neXtProt	NX_P62249
Antibodypedia	RPS16 antibodies

PROTEIN BROWSER

RPS16-001	RPS16-003	RPS16-004	RPS16-006	RPS16-007	RPS16-009

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
RPS16-001 ENSP00000251453 ENST00000251453	P62249 [Direct mapping] 40S ribosomal protein S16 Show all	Ribosomal proteins Predicted intracellular proteins Plasma proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0000184 [nuclear-transcribed mRNA catabolic process, nonsense-mediated decay] GO:0000462 [maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)] GO:0003723 [RNA binding] GO:0003735 [structural constituent of ribosome] GO:0005515 [protein binding] GO:0005829 [cytosol] GO:0005840 [ribosome] GO:0005925 [focal adhesion] GO:0006364 [rRNA processing] GO:0006412 [translation] GO:0006413 [translational initiation] GO:0006414 [translational elongation] GO:0006415 [translational termination] GO:0006614 [SRP-dependent cotranslational protein targeting to membrane] GO:0010467 [gene expression] GO:0015935 [small ribosomal subunit] GO:0016020 [membrane] GO:0016032 [viral process] GO:0019058 [viral life cycle] GO:0019083 [viral transcription] GO:0022627 [cytosolic small ribosomal subunit] GO:0042274 [ribosomal small subunit biogenesis] GO:0044267 [cellular protein metabolic process] GO:0044822 [poly(A) RNA binding] GO:0070062 [extracellular exosome] Show all	146 aa 16.4 kDa	No	0
RPS16-003 ENSP00000472231 ENST00000601655	M0R210 [Direct mapping] 40S ribosomal protein S16; Ribosomal protein S16, isoform CRA_a Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003735 [structural constituent of ribosome] GO:0005840 [ribosome] GO:0006412 [translation] Show all	129 aa 14.4 kDa	No	0
RPS16-004 ENSP00000367806 ENST00000339471	Q6IPX4 [Direct mapping] 40S ribosomal protein S16; RPS16 protein Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003735 [structural constituent of ribosome] GO:0005840 [ribosome] GO:0006412 [translation] Show all	152 aa 17.1 kDa	No	0
RPS16-006 ENSP00000473220 ENST00000599539	M0R3H0 [Direct mapping] 40S ribosomal protein S16 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003735 [structural constituent of ribosome] GO:0005840 [ribosome] GO:0006412 [translation] Show all	100 aa 11.1 kDa	No	0
RPS16-007 ENSP00000471983 ENST00000599705	M0R1M5 [Direct mapping] 40S ribosomal protein S16 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003735 [structural constituent of ribosome] GO:0005840 [ribosome] GO:0006412 [translation] Show all	85 aa 9.4 kDa	No	0
RPS16-009 ENSP00000468957 ENST00000602153	M0QX76 [Direct mapping] 40S ribosomal protein S16 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003735 [structural constituent of ribosome] GO:0005840 [ribosome] GO:0006412 [translation] Show all	50 aa 5.6 kDa	No	0