We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SLC1A5
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:34.3TPM
GTEx:19.3RPKM
FANTOM5:76.3Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Low
Cells in tubules:Medium
 

Antibody staining

Antibody HPA035239

 

Antibody HPA035240

 

Cells in glomeruli

Medium   Not detected  

Cells in tubules

Medium   High  
   
   
   

KIDNEY - HPA RNA-seq

Average TPM

34.3

overview Female, age 58
Sample 1
TPM: 58.8
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 35.8
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 23.3
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 30.5
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 11.1
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 32.0
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 55.0
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 44.4
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 17.8
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

19.3

GTEx sample id

RPKM

11.218.726.45.740.60510152025303540
 
11.218.726.45.740.60510152025303540

Kidney - Cortex

Kidney - Cortex
RPKM: 19.3
Samples: 32

Max RPKM: 40.6
Min RPKM: 5.7
Std RPKM: 8.9
Median RPKM: 18.7
GTEX-QLQW-1626-SM-4R1K1 40.6
GTEX-13RTJ-2226-SM-5S2Q1 32.9
GTEX-1399S-0526-SM-5IJG8 32.3
GTEX-1497J-0826-SM-5NQAJ 32.2
GTEX-ZVZP-0926-SM-5GIDB 29.9
GTEX-145MN-0326-SM-5QGQI 29.0
GTEX-ZLFU-0926-SM-5P9F8 28.1
GTEX-ZYFD-1526-SM-5NQ7T 27.5
GTEX-XPVG-0526-SM-4B65N 26.0
GTEX-T5JC-1526-SM-4DM68 24.1
GTEX-12696-0926-SM-5FQTV 23.6
GTEX-ZYFG-1626-SM-5GZYY 22.6
GTEX-ZC5H-1726-SM-5HL7X 21.9
GTEX-QDVN-1626-SM-48TZC 21.4
GTEX-UPIC-1126-SM-4IHLO 19.3
GTEX-13OVI-1126-SM-5KLZF 19.1
GTEX-11TTK-1926-SM-5PNW8 18.3
GTEX-12WSG-0826-SM-5EQ5A 17.6
GTEX-P4QS-1126-SM-3NMD5 16.8
GTEX-13O1R-2526-SM-5N9FW 16.2
GTEX-Y5V6-2026-SM-5IFHO 15.4
GTEX-147F4-2626-SM-5Q5CS 12.5
GTEX-11GS4-2326-SM-5A5KS 12.1
GTEX-NPJ8-2226-SM-3TW8D 11.4
GTEX-ZYT6-2226-SM-5GIC9 10.4
GTEX-RN64-1626-SM-48FD7 9.6
GTEX-11OF3-1326-SM-5N9FJ 9.2
GTEX-13OW6-1826-SM-5N9F9 9.1
GTEX-13112-2126-SM-5GCO4 9.0
GTEX-13NYB-1726-SM-5N9G2 7.9
GTEX-13OVL-1826-SM-5KLZR 6.6
GTEX-N7MS-1626-SM-3LK5F 5.7
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

76.3

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 76.3
FF:10017-101C8 60,62,63 years, female 76.3

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.