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AVL9

GENERAL INFORMATION

Gene name

 AVL9

Gene description

 AVL9 homolog (S. cerevisiase)

Protein class

 Predicted intracellular proteins
Predicted membrane proteins

Predicted localization

 Intracellular,Membrane

Number of transcripts

 3
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category
HPA:Expressed in all
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

 Evidence at protein level

Protein expression

 Cytoplasmic expression in most tissues.

DATA RELIABILITY

Data reliability
description

 Antibody staining mainly consistent with RNA expression data. Pending external verification.

Reliability score

 Approved based on 1 antibody.
HPA050957
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RNA AND PROTEIN EXPRESSION SUMMARY
RNA expression (TPM) Protein expression (score)
Brain
Caudate
N/A
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Bronchus
N/A
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Vagina
N/A
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Rectum

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW
Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

 AVL9 (HGNC Symbol)

Synonyms

 KIAA0241

Description

 AVL9 homolog (S. cerevisiase) (HGNC Symbol)

Entrez gene summary

Chromosome

 7

Cytoband

 p14.3

Chromosome location (bp)

 32495426 - 32588721

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000105778 (version 83.38)

Entrez gene

 23080

UniProt

 Q8NBF6 (UniProt - Evidence at protein level)

neXtProt

 NX_Q8NBF6

Antibodypedia

 AVL9 antibodies

PROTEIN BROWSER
AVL9-001
AVL9-002
AVL9-003

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
AVL9-001
ENSP00000387011
ENST00000409301
B8ZZW5 [Direct mapping]
Late secretory pathway protein AVL9 homolog
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   MEMSAT3 predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
 630 aa
69.8 kDa 		No 0
AVL9-002
ENSP00000395134
ENST00000446718
H7C0I1 [Direct mapping]
Late secretory pathway protein AVL9 homolog
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Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
Show all
 568 aa
63.3 kDa 		No 1
AVL9-003
ENSP00000315568
ENST00000318709
Q8NBF6 [Direct mapping]
Late secretory pathway protein AVL9 homolog
A0A024RA36 [Target identity:100%; Query identity:100%]
KIAA0241, isoform CRA_b
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   MEMSAT3 predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
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GO:0016021 [integral component of membrane]
GO:0016477 [cell migration]
GO:0055037 [recycling endosome]
Show all
 648 aa
71.9 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.