Tissue expression of BRAT1 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	7.3	TPM
GTEx:	12.2	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Low
Glial cells:	Not detected
Neuronal cells:	Low
Neuropil:	Low

Antibody staining	Antibody HPA029455
Endothelial cells	Low
Glial cells	Not detected
Neuronal cells	Low
Neuropil	Low

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	7.3

Male, age 5

Sample 1
TPM: 9.2

Female, age 40

Sample 2
TPM: 7.5

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 5.2

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	12.2

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 13.6

Samples: 114

Max RPKM: 30.1
Min RPKM: 7
Std RPKM: 3.1
Median RPKM: 13.2

GTEX-11OF3-2926-SM-5HL78

30.1

GTEX-1117F-3226-SM-5N9CT

21.6

GTEX-X585-3026-SM-46MWF

20.1

GTEX-13FXS-3126-SM-5J2NN

18.8

GTEX-XLM4-3026-SM-4AT6L

18.8

GTEX-ZZPT-3026-SM-5GZXH

18.7

GTEX-13S7M-3126-SM-5RQJQ

18.3

GTEX-X4XX-3026-SM-3NMB2

18.3

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 10.7

Samples: 108

Max RPKM: 16.8
Min RPKM: 4.9
Std RPKM: 2.5
Median RPKM: 10.4

GTEX-13NYS-0011-R10a-SM-5MR4S

16.8

GTEX-13SLW-0011-R10a-SM-5S2UI

16.2

GTEX-X4XX-0011-R10B-SM-46MWO

15.7

GTEX-13O3O-0011-R10a-SM-5LUA9

15.6

GTEX-13SLX-0011-R10a-SM-5P9HV

15.5

GTEX-13OW6-0011-R10a-SM-5L3HE

15.4

GTEX-13OW7-0011-R10a-SM-5L3H3

15.2

GTEX-11GSP-0011-R10a-SM-5NQ7J

15.0

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue