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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:177.9RPKM
FANTOM5:177.2Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:High
 

Antibody staining

Antibody HPA027407

 

Glial cells

Low  

Neuronal cells

High  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

177.9

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 177.9
Samples: 117

Max RPKM: 357.2
Min RPKM: 71.7
Std RPKM: 50.2
Median RPKM: 173.5
GTEX-139TT-0011-R5b-SM-5K7W8 357.2
GTEX-ZUA1-0011-R5b-SM-51MTG 292.9
GTEX-13X6K-0011-R5b-SM-5PNUE 285.6
GTEX-T6MN-0011-R5A-SM-32QPD 281.9
GTEX-12WSA-0011-R5b-SM-5GU5I 279.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 260.9
GTEX-11OF3-0011-R5a-SM-57WB4 256.9
GTEX-T5JC-0011-R5A-SM-32PLK 253.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 249.9
GTEX-12WSC-0011-R5b-SM-5CVNS 245.7
GTEX-1399T-0011-R5b-SM-5IJDK 241.1
GTEX-145MH-0011-R5a-SM-5P9JT 240.9
GTEX-WWYW-0011-R5A-SM-3NB3E 239.3
GTEX-13G51-0011-R5a-SM-5L3EB 239.0
GTEX-12WSB-0011-R5b-SM-5GU67 236.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 235.8
GTEX-WHSE-0011-R5A-SM-3P5ZO 234.7
GTEX-131YS-0011-R5b-SM-5K7YB 233.1
GTEX-139T8-0011-R5b-SM-5J1MO 232.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 231.9
GTEX-11H98-0011-R5b-SM-57WCF 229.7
GTEX-132Q8-0011-R5a-SM-5IJDM 229.2
GTEX-1313W-0011-R5b-SM-5L3EP 222.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 221.4
GTEX-R55E-0011-R5A-SM-2TC5N 216.3
GTEX-X585-0011-R5A-SM-46MVI 211.1
GTEX-11NV4-0011-R5a-SM-5NQ88 209.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 208.6
GTEX-WL46-0011-R5A-SM-3LK6V 207.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 205.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 204.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 203.4
GTEX-14ABY-0011-R5b-SM-5SI7B 203.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 202.1
GTEX-13CZV-0011-R5a-SM-5K7XA 197.7
GTEX-12WSF-0011-R5a-SM-5HL8K 197.5
GTEX-13FLV-0011-R5a-SM-5LZWT 197.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 197.4
GTEX-WVLH-0011-R5A-SM-3MJFW 196.7
GTEX-N7MS-0011-R5a-SM-2HMK8 195.2
GTEX-P44H-0011-R5A-SM-2XCEX 194.1
GTEX-QVJO-0011-R5A-SM-2S1QM 192.7
GTEX-13JUV-0011-R5a-SM-5LZY5 191.7
GTEX-13O3O-0011-R5b-SM-5KM44 191.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 190.5
GTEX-13JVG-0011-R5a-SM-5MR4O 190.4
GTEX-T2IS-0011-R5A-SM-32QP4 190.3
GTEX-S7SE-0011-R5A-SM-2XCDA 189.8
GTEX-WZTO-0011-R5B-SM-3NMC5 189.7
GTEX-13X6J-0011-R5b-SM-5PNWT 189.3
GTEX-145LS-0011-R5a-SM-5SI65 189.0
GTEX-11GSP-0011-R5a-SM-57WBE 187.4
GTEX-13FXS-0011-R5b-SM-5LZYE 187.1
GTEX-13FLW-0011-R5a-SM-5LZX6 187.0
GTEX-13NYB-0011-R5a-SM-5MR45 184.7
GTEX-14BIM-0011-R5b-SM-5S2RM 181.8
GTEX-13VXU-0011-R5a-SM-5O9D7 178.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 174.6
GTEX-X261-0011-R5A-SM-3NMB4 173.5
GTEX-13SLX-0011-R5a-SM-5O9BV 173.3
GTEX-ZE7O-0011-R5a-SM-57WBO 172.9
GTEX-13NYS-0011-R5a-SM-5MR4D 171.5
GTEX-UTHO-0011-R5A-SM-3GIJD 171.4
GTEX-N7MT-0011-R5a-SM-2I3G6 170.3
GTEX-13OW6-0011-R5a-SM-5O9BK 170.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 169.8
GTEX-TSE9-0011-R5A-SM-3DB7J 169.2
GTEX-XMD1-0011-R5A-SM-4AT47 168.8
GTEX-13X6I-0011-R5a-SM-5PNWW 164.2
GTEX-XOTO-0011-R5A-SM-4B657 162.7
GTEX-NPJ7-0011-R5a-SM-33HBK 159.4
GTEX-13OW7-0011-R5b-SM-5O9DM 158.6
GTEX-13OW5-0011-R5b-SM-5L3FR 157.5
GTEX-Z93S-0011-R5b-SM-4RGNI 156.0
GTEX-RU72-0011-R5A-SM-2TF6U 153.6
GTEX-OHPN-0011-R5A-SM-2I5FF 152.0
GTEX-13OVL-0011-R5b-SM-5L3FU 151.3
GTEX-12WSD-0011-R5b-SM-5CVNG 150.5
GTEX-12ZZX-0011-R5a-SM-5HL89 150.4
GTEX-13OVH-0011-R5b-SM-5KM4L 150.2
GTEX-YFC4-0011-R5a-SM-4RGLR 149.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 149.2
GTEX-QMR6-0011-R5A-SM-32PKT 147.4
GTEX-139TS-0011-R5b-SM-5J2MZ 146.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 146.1
GTEX-1445S-0011-R5a-SM-5PNUS 143.8
GTEX-ZXG5-0011-R5b-SM-57WBN 141.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 141.2
GTEX-RVPV-0011-R5A-SM-2TF69 140.3
GTEX-ZV68-0011-R5a-SM-4YCDW 140.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 140.1
GTEX-13CIG-0011-R5b-SM-5L3F2 138.8
GTEX-PVOW-0011-R5A-SM-32PL7 137.4
GTEX-13S7M-0011-R5b-SM-5P9HS 135.1
GTEX-144GO-0011-R5a-SM-5PNUR 134.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 132.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 130.9
GTEX-NL4W-0011-R5a-SM-2I3GD 129.7
GTEX-ZVT3-0011-R5a-SM-51MSI 128.5
GTEX-X4XX-0011-R5A-SM-46MWN 128.2
GTEX-14BIN-0011-R5b-SM-5SI78 125.8
GTEX-11WQC-0011-R5a-SM-5BC74 124.9
GTEX-RVPU-0011-R5A-SM-2XCAD 124.3
GTEX-YJ89-0011-R5a-SM-4V6GM 122.0
GTEX-NL3H-0011-R5a-SM-2I3GB 118.2
GTEX-13112-0011-R5b-SM-5DUV8 117.0
GTEX-144GL-0011-R5b-SM-5PNUJ 111.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 109.0
GTEX-OXRN-0011-R5A-SM-2I5EF 105.3
GTEX-12WSH-0011-R5b-SM-5P9F3 105.0
GTEX-11UD1-0011-R5b-SM-5P9FP 103.6
GTEX-S7PM-0011-R5A-SM-3NM8G 100.1
GTEX-13CF2-0011-R5a-SM-5LZWS 99.2
GTEX-13FHP-0011-R5b-SM-5LZY2 91.8
GTEX-145MG-0011-R5b-SM-5S2VU 82.4
GTEX-13NZA-0011-R5b-SM-5KM4K 79.4
GTEX-1477Z-0011-R5b-SM-5PNUO 71.7
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

177.2

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 177.2
FF:10379-105H1 89 years, female 226.9
FF:10164-103B2 76 years, female 127.5

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