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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:280.4TPM
GTEx:187.0RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Low
Neuronal cells:High
Neuropil:Low
 

Antibody staining

Antibody HPA027407

 

Endothelial cells

Low  

Glial cells

Low  

Neuronal cells

High  

Neuropil

Low  
 
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

280.4

N/A Male, age 5
Sample 1
TPM: 356.2
overview Female, age 40
Sample 2
TPM: 244.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 240.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

187.0

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 178.2
Samples: 114

Max RPKM: 284.9
Min RPKM: 99.1
Std RPKM: 31.5
Median RPKM: 181.2
GTEX-ZE7O-3126-SM-5HL5X 284.9
GTEX-11OC5-0726-SM-5P9JK 259.7
GTEX-13X6K-2926-SM-5Q5D5 247.9
GTEX-Y8DK-0826-SM-4TT3T 238.6
GTEX-WHSE-3026-SM-3P5ZH 234.5
GTEX-14BMV-3026-SM-5S2PQ 229.4
GTEX-13OVJ-2826-SM-5L3GW 227.2
GTEX-XLM4-3026-SM-4AT6L 225.5
GTEX-X585-3026-SM-46MWF 220.6
GTEX-WWYW-3126-SM-3NB39 218.0
GTEX-145LS-3126-SM-5Q5BY 217.7
GTEX-131YS-3126-SM-5KLYT 217.6
GTEX-T5JC-2426-SM-3NMDB 217.6
GTEX-WVLH-3026-SM-3MJG9 215.9
GTEX-13OW6-3026-SM-5J2MI 213.6
GTEX-13FXS-3126-SM-5J2NN 209.4
GTEX-139T8-1026-SM-5J2MC 208.1
GTEX-13FHO-3026-SM-5J1O9 207.1
GTEX-ZAK1-3026-SM-5S2MJ 206.7
GTEX-X4XX-3026-SM-3NMB2 205.0
GTEX-144FL-3026-SM-5O99C 203.4
GTEX-11DXY-3226-SM-5GIDE 202.9
GTEX-QVJO-1426-SM-2S1QY 202.3
GTEX-11NUK-2926-SM-5A5MD 199.6
GTEX-13O3O-3126-SM-5KM3H 199.0
GTEX-WL46-2926-SM-3LK82 199.0
GTEX-14ASI-3026-SM-5S2PN 198.7
GTEX-11PRG-2926-SM-5987A 197.6
GTEX-WZTO-2926-SM-3NM9I 197.6
GTEX-XOTO-3026-SM-4B65M 195.9
GTEX-1399T-3026-SM-5KLZC 195.2
GTEX-1192X-3126-SM-5N9BY 193.7
GTEX-117XS-3026-SM-5N9CA 193.1
GTEX-13QIC-2926-SM-5J2NF 192.7
GTEX-ZUA1-3026-SM-59HJC 192.2
GTEX-ZVT3-3026-SM-5E43N 191.6
GTEX-13SLX-3126-SM-5S2Q5 191.3
GTEX-11DXW-1126-SM-5H12Q 191.2
GTEX-12WSC-3026-SM-5GCNF 191.0
GTEX-YJ89-3026-SM-5IFJI 190.8
GTEX-131XW-3126-SM-5LZUC 188.6
GTEX-145MG-3026-SM-5RQJA 188.3
GTEX-13NYB-3026-SM-5IJD7 187.3
GTEX-11NV4-2126-SM-5N9DS 186.8
GTEX-12126-1026-SM-5P9JJ 186.4
GTEX-12ZZY-3026-SM-5GCOU 184.5
GTEX-12ZZZ-3026-SM-5BC67 184.5
GTEX-11TTK-2926-SM-5PNYP 184.2
GTEX-T6MN-2626-SM-32PMQ 184.1
GTEX-13FLW-1426-SM-5K7YE 183.9
GTEX-13NYC-2826-SM-5K7WR 183.6
GTEX-145MF-2726-SM-5O995 183.4
GTEX-13OW8-2826-SM-5L3GC 183.3
GTEX-ZYFD-3026-SM-5E44C 182.1
GTEX-R55F-1326-SM-5S2V4 181.8
GTEX-11ONC-2926-SM-5P9JM 181.6
GTEX-11GSO-2926-SM-5HL73 181.4
GTEX-145MH-3026-SM-5Q5DZ 181.0
GTEX-12WSD-3126-SM-5HL7P 176.4
GTEX-13OVH-3026-SM-5MR4N 176.2
GTEX-12ZZX-2926-SM-5GCOQ 175.6
GTEX-144GL-3026-SM-5Q5CW 174.7
GTEX-Z93S-2926-SM-57WB9 174.6
GTEX-1313W-3126-SM-5LZUI 174.5
GTEX-QVUS-2826-SM-3GADB 174.4
GTEX-1117F-3226-SM-5N9CT 174.3
GTEX-Y111-2726-SM-4TT3N 173.5
GTEX-RU72-3026-SM-5SI7Y 173.1
GTEX-13JVG-3126-SM-5L3FH 172.8
GTEX-NPJ7-2726-SM-2I3FT 171.8
GTEX-13X6J-3026-SM-5Q5CU 171.4
GTEX-12ZZW-2926-SM-5LZUP 169.1
GTEX-13O3Q-2926-SM-5KM45 168.9
GTEX-132Q8-3026-SM-5PNVG 168.7
GTEX-YFC4-3126-SM-5PNV6 167.4
GTEX-13PL6-3126-SM-5LUAR 164.7
GTEX-13FHP-3026-SM-5IJBS 164.5
GTEX-13NYS-3126-SM-5KLYV 163.8
GTEX-13VXU-2926-SM-5LU5C 163.1
GTEX-11GSP-3226-SM-5986O 160.0
GTEX-14A5I-2926-SM-5Q5CQ 159.9
GTEX-111FC-3126-SM-5GZZ2 159.8
GTEX-13JUV-2926-SM-5LZX7 159.6
GTEX-T2IS-3026-SM-32QPM 158.6
GTEX-11EMC-3226-SM-5EGKW 157.6
GTEX-11WQK-3026-SM-5EQL6 155.3
GTEX-13S7M-3126-SM-5RQJQ 153.4
GTEX-NPJ8-1526-SM-2D7VU 152.8
GTEX-11O72-2926-SM-5BC4V 151.1
GTEX-QMR6-1426-SM-32PLA 150.3
GTEX-11ZUS-2926-SM-5FQSL 150.1
GTEX-RNOR-2326-SM-2TF4I 150.1
GTEX-1445S-3026-SM-5O9BR 149.6
GTEX-11EI6-3026-SM-5GZZO 147.6
GTEX-13OW7-3026-SM-5L3GY 146.0
GTEX-Q2AG-2926-SM-2HMJ3 145.7
GTEX-13PVQ-3026-SM-5SI93 145.2
GTEX-1128S-2726-SM-5H12C 144.5
GTEX-QDT8-2926-SM-32PKC 144.1
GTEX-OXRN-2426-SM-2I5EQ 141.6
GTEX-PVOW-2526-SM-2XCF7 139.0
GTEX-TSE9-3026-SM-3DB76 138.2
GTEX-PWO3-0926-SM-2I5EY 138.1
GTEX-12WSH-3026-SM-5CVNI 136.2
GTEX-147GR-3026-SM-5S2ML 136.2
GTEX-13G51-3026-SM-5IJB8 135.1
GTEX-11GS4-3126-SM-5A5LH 134.7
GTEX-11OF3-2926-SM-5HL78 132.3
GTEX-ZAJG-3126-SM-5HL9J 130.8
GTEX-ZZPT-3026-SM-5GZXH 130.2
GTEX-UTHO-3026-SM-3GAFB 123.5
GTEX-N7MT-1126-SM-5SI7V 120.3
GTEX-13IVO-2926-SM-5L3CZ 99.5
GTEX-12WSA-2926-SM-5EQ4D 99.1
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 196.4
Samples: 108

Max RPKM: 413.5
Min RPKM: 72.2
Std RPKM: 46.9
Median RPKM: 197.3
GTEX-12WSD-0011-R10b-SM-5GU79 413.5
GTEX-12ZZY-0011-R10b-SM-5HL7W 365.4
GTEX-139TS-0011-R10a-SM-5K7TU 299.6
GTEX-13O3O-0011-R10a-SM-5LUA9 283.9
GTEX-13X6K-0011-R10a-SM-5P9JR 275.7
GTEX-X4EP-0011-R10B-SM-4QASJ 263.5
GTEX-12WSC-0011-R10a-SM-5GU57 259.2
GTEX-13FXS-0011-R10a-SM-5J2MA 252.4
GTEX-14BIN-0011-R10a-SM-5S2UA 248.8
GTEX-T5JC-0011-R10A-SM-32PM2 242.0
GTEX-13NYS-0011-R10a-SM-5MR4S 241.1
GTEX-12WSM-0011-R10a-SM-5DUWV 240.7
GTEX-ZUA1-0011-R10a-SM-51MT6 240.7
GTEX-Y8DK-0011-R10A-SM-4SOK1 240.1
GTEX-XLM4-0011-R10A-SM-4AT5P 239.3
GTEX-WWYW-0011-R10A-SM-3NB35 238.2
GTEX-14ASI-0011-R10b-SM-5S2VZ 235.1
GTEX-13OVJ-0011-R10b-SM-5L3HT 234.9
GTEX-13N2G-0011-R10a-SM-5MR34 233.0
GTEX-YJ89-0011-R10a-SM-4SOK9 232.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 230.2
GTEX-11H98-0011-R10b-SM-5NQ98 229.4
GTEX-12WSF-0011-R10a-SM-5LZVH 228.2
GTEX-147GR-0011-R10b-SM-5S2UM 227.8
GTEX-13SLX-0011-R10a-SM-5P9HV 224.8
GTEX-13RTJ-0011-R10b-SM-5O9CW 223.1
GTEX-T6MN-0011-R10A-SM-32QP7 222.4
GTEX-13NYB-0011-R10a-SM-5KM43 217.2
GTEX-13CZV-0011-R10b-SM-5LZYD 216.7
GTEX-1313W-0011-R10b-SM-5DUXA 216.1
GTEX-131YS-0011-R10b-SM-5EQ5N 215.9
GTEX-13OW6-0011-R10a-SM-5L3HE 215.6
GTEX-YFC4-0011-R10a-SM-4SOK5 213.6
GTEX-132Q8-0011-R10b-SM-5DUWZ 213.3
GTEX-ZAB4-0011-R10a-SM-4SOKH 213.0
GTEX-13X6J-0011-R10b-SM-5PNWA 211.6
GTEX-ZVT3-0011-R10b-SM-57WB6 210.9
GTEX-12WSE-0011-R10b-SM-5P9JV 208.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC 207.9
GTEX-Z93S-0011-R10a-SM-4RGNM 206.9
GTEX-13O3Q-0011-R10b-SM-5KM39 206.6
GTEX-NPJ7-0011-R10A-SM-2I3E5 203.4
GTEX-WVLH-0011-R10A-SM-3MJFM 203.0
GTEX-12ZZX-0011-R10b-SM-5DUWK 202.0
GTEX-13OW8-0011-R10a-SM-5L3H6 201.9
GTEX-145MG-0011-R10a-SM-5PNWG 201.9
GTEX-X585-0011-R10A-SM-46MUY 201.4
GTEX-13QIC-0011-R10a-SM-5O9C7 201.3
GTEX-1445S-0011-R10a-SM-5PNWB 201.3
GTEX-13JUV-0011-R10b-SM-5LZXR 200.6
GTEX-14BIL-0011-R10a-SM-5SI75 200.1
GTEX-X4XX-0011-R10B-SM-46MWO 198.5
GTEX-147F4-0011-R10b-SM-5S2WC 198.4
GTEX-13FHO-0011-R10b-SM-5J2MM 197.6
GTEX-ZVZQ-0011-R10b-SM-51MRT 197.0
GTEX-131XH-0011-R10a-SM-5EGLJ 195.3
GTEX-13N1W-0011-R10b-SM-5MR4H 195.1
GTEX-13OW7-0011-R10a-SM-5L3H3 192.1
GTEX-ZF28-0011-R10a-SM-4WWEH 191.6
GTEX-13FLW-0011-R10b-SM-5LZZF 191.5
GTEX-WL46-0011-R10A-SM-3MJFQ 190.5
GTEX-N7MS-0011-R10A-SM-2HMJK 189.5
GTEX-145MH-0011-R10b-SM-5PNUK 189.4
GTEX-13G51-0011-R10b-SM-5LZYF 185.8
GTEX-P44H-0011-R10A-SM-2XCEK 185.7
GTEX-145LS-0011-R10a-SM-5PNUQ 181.1
GTEX-13FLV-0011-R10b-SM-5LZZ2 179.7
GTEX-WZTO-0011-R10B-SM-4E3KB 179.4
GTEX-12126-0011-R10b-SM-5BC6T 177.7
GTEX-12WSH-0011-R10a-SM-5LZUS 177.4
GTEX-QMR6-0011-R10A-SM-32PKO 174.4
GTEX-13S7M-0011-R10b-SM-5PNZB 173.8
GTEX-NPJ8-0011-R10A-SM-2YUMO 172.7
GTEX-13OVL-0011-R10a-SM-5L3GS 172.1
GTEX-S7SE-0011-R10A-SM-2XCDF 170.9
GTEX-11ZUS-0011-R10b-SM-5BC79 169.0
GTEX-NL3H-0011-R10A-SM-2I3E9 169.0
GTEX-14753-0011-R10b-SM-5S2WE 166.9
GTEX-11WQK-0011-R10a-SM-5BC6R 166.3
GTEX-131XW-0011-R10a-SM-5DUVA 164.8
GTEX-QVUS-0011-R10A-SM-3GIK3 164.7
GTEX-NL4W-0011-R10A-SM-2I3DY 163.8
GTEX-11GSP-0011-R10a-SM-5NQ7J 163.6
GTEX-Q2AG-0011-R10A-SM-2HMLA 162.7
GTEX-QVJO-0011-R10A-SM-2S1QJ 161.9
GTEX-13QJC-0011-R10a-SM-5SI63 161.4
GTEX-N7MT-0011-R10A-SM-2I3E1 160.4
GTEX-11WQC-0011-R10a-SM-57WCT 160.2
GTEX-13X6I-0011-R10a-SM-5PNWI 159.7
GTEX-13FTZ-0011-R10b-SM-5KLZS 156.7
GTEX-ZXG5-0011-R10a-SM-57WDD 155.0
GTEX-12ZZW-0011-R10b-SM-5HL9X 154.9
GTEX-X261-0011-R10B-SM-4E3JT 150.1
GTEX-13JVG-0011-R10b-SM-5KM2P 149.3
GTEX-TSE9-0011-R10A-SM-3DB7O 149.2
GTEX-13SLW-0011-R10a-SM-5S2UI 147.9
GTEX-ZV68-0011-R10a-SM-51MT7 147.5
GTEX-145LU-0011-R10a-SM-5PNWJ 145.7
GTEX-XMD1-0011-R10A-SM-4AT4A 143.9
GTEX-RVPU-0011-R10A-SM-2XCAH 141.6
GTEX-12WSA-0011-R10b-SM-5P9ET 139.2
GTEX-1477Z-0011-R10b-SM-5S2RF 137.0
GTEX-ZE7O-0011-R10a-SM-57WAZ 136.8
GTEX-OXRN-0011-R10A-SM-2I5GC 133.3
GTEX-13NZA-0011-R10b-SM-5KM54 119.1
GTEX-QDT8-0011-R10A-SM-32PKG 117.3
GTEX-OXRO-0011-R10A-SM-2I5EH 107.7
GTEX-13IVO-0011-R10a-SM-5LZY3 72.2
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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