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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:13.8TPM
GTEx:31.2RPKM
FANTOM5:45.4Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA001400

 

Adipocytes

Medium  

Glandular cells

Medium  

Myoepithelial cells

Medium  
 
 

BREAST - HPA RNA-seq

Average TPM

13.8

overview Female, age 52
Sample 1
TPM: 12.0
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 16.2
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 21.0
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 6.0
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

31.2

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 31.2
Samples: 214

Max RPKM: 108.8
Min RPKM: 8.9
Std RPKM: 16.1
Median RPKM: 26.8
GTEX-PSDG-1626-SM-48TCQ 108.8
GTEX-WY7C-2726-SM-3NB3P 82.5
GTEX-ZT9W-2026-SM-51MRA 81.0
GTEX-XV7Q-2326-SM-4BRVZ 79.0
GTEX-11DZ1-0326-SM-5N9BN 77.6
GTEX-Y8E4-1626-SM-5S2MW 74.1
GTEX-XQ8I-2426-SM-4WAXY 73.3
GTEX-YEC3-1026-SM-5IFI5 68.6
GTEX-13CF3-2126-SM-5IFJP 68.1
GTEX-YFCO-1826-SM-4W1YH 66.5
GTEX-S4Q7-1126-SM-4AD6R 64.7
GTEX-QMRM-1626-SM-4R1KV 64.4
GTEX-ZQG8-0726-SM-5P9H9 61.5
GTEX-Y9LG-1426-SM-5IFJZ 58.3
GTEX-13S86-1226-SM-5S2OA 58.2
GTEX-11ZTT-2326-SM-5EQLG 57.9
GTEX-ZLFU-2126-SM-4WWEV 57.4
GTEX-XGQ4-0926-SM-4AT4U 57.0
GTEX-ZWKS-2826-SM-5NQ74 56.9
GTEX-R55D-0826-SM-48FEA 56.6
GTEX-ZDYS-1126-SM-5K7UB 51.8
GTEX-Y5V6-2126-SM-4WWFX 51.7
GTEX-145ME-1526-SM-5Q5F2 51.5
GTEX-144GM-0926-SM-5O994 50.6
GTEX-UTHO-1026-SM-3GAF7 50.6
GTEX-ZZ64-1226-SM-5E43R 50.2
GTEX-YB5E-1726-SM-5IFJ3 49.7
GTEX-145MO-0826-SM-5NQBL 49.6
GTEX-XMK1-1126-SM-4IHJ8 49.1
GTEX-R53T-1526-SM-48FEK 48.6
GTEX-S32W-2026-SM-4AD6E 48.6
GTEX-13O61-1826-SM-5KM4I 48.5
GTEX-TKQ1-0226-SM-33HB5 47.6
GTEX-11ONC-2126-SM-5HL6E 47.5
GTEX-12WSN-1326-SM-5GCNT 47.4
GTEX-RUSQ-2026-SM-4GIAK 47.1
GTEX-U8XE-0826-SM-4E3J1 46.9
GTEX-117YX-1426-SM-5H12H 44.6
GTEX-11NSD-0926-SM-5N9DR 44.3
GTEX-11I78-2226-SM-5PNYA 43.9
GTEX-11ZUS-0826-SM-5FQUY 43.7
GTEX-139TU-0626-SM-5KM3X 43.4
GTEX-132AR-0826-SM-5EGK6 41.8
GTEX-139T6-1626-SM-5PNYZ 41.7
GTEX-12BJ1-1826-SM-5HL9N 41.2
GTEX-XUW1-2326-SM-4BOO5 40.6
GTEX-11O72-2126-SM-5N9FO 40.3
GTEX-1117F-2826-SM-5GZXL 39.6
GTEX-13PVQ-1026-SM-5KM3M 39.6
GTEX-13NZ8-0126-SM-5IJCT 39.1
GTEX-ZYT6-0126-SM-5E45J 38.5
GTEX-1211K-1926-SM-5EQLB 38.4
GTEX-11P82-1326-SM-5HL62 38.2
GTEX-146FH-0826-SM-5SI8T 38.1
GTEX-QVJO-1826-SM-447C9 38.0
GTEX-ZDTT-2126-SM-5S2OJ 38.0
GTEX-S4UY-0726-SM-4AD6X 37.7
GTEX-T2YK-2226-SM-32QPT 37.5
GTEX-14E6E-1326-SM-5S2NR 37.4
GTEX-12WSM-1726-SM-5BC6J 36.7
GTEX-1192X-2326-SM-5987X 36.2
GTEX-T5JW-2026-SM-4DM63 35.7
GTEX-ZA64-1526-SM-5CVMD 35.1
GTEX-T6MO-0326-SM-32QOK 34.9
GTEX-11EQ9-1826-SM-5Q5AJ 34.7
GTEX-U412-1826-SM-4DXTJ 34.1
GTEX-Y114-2026-SM-4TT7L 33.9
GTEX-13FTX-1126-SM-5N9EN 33.8
GTEX-11GSO-1926-SM-5A5K3 33.7
GTEX-ZLV1-1426-SM-4WWES 33.4
GTEX-12WSB-0626-SM-59HJO 32.9
GTEX-11LCK-2426-SM-5HL5F 32.8
GTEX-ZUA1-1526-SM-59HLS 32.5
GTEX-11TT1-2126-SM-5GU5Y 32.4
GTEX-13FTW-1426-SM-5LZWZ 32.2
GTEX-133LE-1726-SM-5K7VQ 32.1
GTEX-YB5K-1626-SM-5IFIN 31.8
GTEX-11TUW-1826-SM-5BC5D 31.5
GTEX-S33H-0326-SM-4AD6N 31.5
GTEX-X4XY-0926-SM-4E3JD 31.5
GTEX-1399U-1826-SM-5PNZ1 31.4
GTEX-13W3W-1226-SM-5LU4H 31.2
GTEX-13D11-1026-SM-5IJFB 30.7
GTEX-ZQUD-1926-SM-51MSA 30.6
GTEX-ZAB4-2526-SM-5HL8M 30.4
GTEX-ZV7C-1826-SM-5NQ83 30.4
GTEX-132Q8-1426-SM-5EGK7 30.3
GTEX-11DXZ-1926-SM-5GZZL 30.1
GTEX-1122O-1226-SM-5H113 30.0
GTEX-WXYG-2226-SM-4E3IM 29.9
GTEX-SE5C-2126-SM-4BRUJ 29.8
GTEX-XYKS-1326-SM-4BRUN 29.7
GTEX-YJ8O-2226-SM-5IFHW 29.6
GTEX-ZYWO-2326-SM-5GZY4 29.5
GTEX-12KS4-0126-SM-5Q5A5 29.1
GTEX-11DXY-2326-SM-5GICW 29.0
GTEX-REY6-2426-SM-48FF5 28.7
GTEX-Y5V5-2126-SM-4WWFO 28.7
GTEX-U3ZN-1926-SM-4DXSG 28.6
GTEX-ZYW4-0826-SM-5GIDG 28.4
GTEX-145MN-1926-SM-5SIAI 28.2
GTEX-XQ3S-1326-SM-4BOPQ 28.0
GTEX-13O3Q-2226-SM-5KM4O 27.9
GTEX-11WQK-2426-SM-5GU5C 27.5
GTEX-TKQ2-1826-SM-33HB2 27.0
GTEX-WRHU-0326-SM-3MJFY 27.0
GTEX-ZV6S-1826-SM-5NQ8D 26.8
GTEX-ZY6K-1626-SM-5GZWV 26.7
GTEX-13N11-1726-SM-5J1OJ 26.1
GTEX-145LT-0726-SM-5S2VM 26.1
GTEX-WI4N-1426-SM-3LK7H 26.0
GTEX-X261-0626-SM-3NMD9 25.9
GTEX-13N1W-0626-SM-5MR4U 25.8
GTEX-UPK5-2326-SM-3P5Z8 25.6
GTEX-X15G-1626-SM-3NMB3 25.5
GTEX-ZVT2-1826-SM-5NQ8W 25.5
GTEX-ZPIC-1126-SM-5BC7F 25.1
GTEX-WOFL-0826-SM-3MJG1 24.9
GTEX-XUJ4-1926-SM-4BOOV 24.9
GTEX-UJHI-1426-SM-3DB9C 24.8
GTEX-TML8-1226-SM-32QON 24.6
GTEX-ZVT4-1026-SM-57WC4 24.5
GTEX-132NY-0826-SM-5K7Y7 24.4
GTEX-Y3I4-1526-SM-4TT7K 24.4
GTEX-13113-1726-SM-5GCOO 24.1
GTEX-11OF3-1926-SM-59889 24.0
GTEX-13OW8-0226-SM-5K7UP 24.0
GTEX-VUSG-2226-SM-4KKZO 24.0
GTEX-X4EP-2926-SM-3P5YQ 24.0
GTEX-13W46-0826-SM-5LU3H 23.9
GTEX-144GL-2026-SM-5LU3O 23.8
GTEX-RWS6-1926-SM-47JXY 23.7
GTEX-117XS-1926-SM-5GICO 23.5
GTEX-ZYFC-0826-SM-5E44K 23.3
GTEX-QEL4-2126-SM-447AE 23.0
GTEX-WFON-1826-SM-3GILG 23.0
GTEX-ZTTD-1026-SM-51MRD 23.0
GTEX-14AS3-1626-SM-5S2OY 22.7
GTEX-XMD1-0826-SM-4AT52 22.7
GTEX-11P81-1926-SM-5BC53 22.5
GTEX-ZDXO-0126-SM-5S2ND 22.5
GTEX-11EI6-0626-SM-5985T 22.4
GTEX-S7SE-0826-SM-4AT4D 22.4
GTEX-13NZ9-1026-SM-5MR5K 22.1
GTEX-Y3IK-2326-SM-4WWDT 22.1
GTEX-14ABY-2126-SM-5QGQZ 21.2
GTEX-Y8LW-1626-SM-5IFHX 21.2
GTEX-T5JC-2126-SM-32PMO 20.9
GTEX-ZEX8-2226-SM-57WC6 20.8
GTEX-1269C-2426-SM-5FQSN 20.7
GTEX-1314G-1226-SM-5BC6D 20.7
GTEX-SIU7-1626-SM-4BRUK 20.6
GTEX-ZF3C-2326-SM-5S2MZ 20.6
GTEX-ZVTK-0326-SM-51MRR 20.6
GTEX-S341-1526-SM-4AD6K 20.4
GTEX-WYJK-1326-SM-3NB2T 20.4
GTEX-XMD2-0926-SM-4WWEF 20.4
GTEX-Y111-2026-SM-4SOJA 20.3
GTEX-11NV4-2026-SM-5N9DG 20.2
GTEX-YFC4-1426-SM-5IFJG 20.1
GTEX-13OW5-2226-SM-5L3HC 19.7
GTEX-T6MN-0726-SM-32PML 18.9
GTEX-ZVZQ-0826-SM-51MRF 18.9
GTEX-13NZB-2126-SM-5MR4Y 18.8
GTEX-ZTX8-1226-SM-4YCE9 18.7
GTEX-QEG5-0726-SM-4R1JQ 18.6
GTEX-111YS-1926-SM-5GICC 18.5
GTEX-13FTY-2226-SM-5J1ND 18.4
GTEX-1313W-0826-SM-5EQ4T 18.3
GTEX-RU72-0626-SM-46MUI 18.3
GTEX-XBED-1626-SM-47JYN 18.0
GTEX-12ZZX-1126-SM-5EGKB 17.9
GTEX-14753-2426-SM-5LU8U 17.9
GTEX-Y5LM-1726-SM-4VDSX 17.9
GTEX-ZZPU-0626-SM-5E43T 17.7
GTEX-11EMC-2026-SM-5A5JV 17.6
GTEX-S4P3-1326-SM-4AD6V 17.6
GTEX-13CF2-2026-SM-5K7VI 17.5
GTEX-ZF2S-2026-SM-5E461 17.5
GTEX-ZVE2-1226-SM-5NQ8R 17.4
GTEX-Q2AG-0326-SM-48U1O 17.3
GTEX-ZAJG-0626-SM-5HL8X 17.1
GTEX-13QIC-2326-SM-5LU5N 16.9
GTEX-U3ZH-1426-SM-4DXSR 16.8
GTEX-11PRG-0826-SM-5EQ6A 16.5
GTEX-QDT8-0626-SM-48TYW 16.5
GTEX-131YS-0626-SM-5EGKL 16.4
GTEX-ZC5H-2626-SM-5J2MG 16.1
GTEX-13FHO-0826-SM-5L3E8 16.0
GTEX-ZU9S-1926-SM-5NQBP 16.0
GTEX-WYVS-1726-SM-3NMAY 15.8
GTEX-TMMY-0726-SM-33HBE 15.7
GTEX-ZXES-0826-SM-5E43C 15.5
GTEX-11DXW-0626-SM-5N9ER 15.4
GTEX-11GS4-2126-SM-5A5KR 15.0
GTEX-ZF29-1926-SM-5S2P1 15.0
GTEX-139T8-0826-SM-5L3DE 14.9
GTEX-13PL6-2926-SM-5L3I2 14.4
GTEX-13O3P-0826-SM-5L3DH 14.3
GTEX-T2IS-1526-SM-32QPR 14.3
GTEX-11EM3-1326-SM-5N9C6 14.2
GTEX-12WSK-2226-SM-5GCO5 14.0
GTEX-13O3O-0826-SM-5K7WE 13.7
GTEX-VJWN-0726-SM-3GIJ8 13.7
GTEX-XUZC-1626-SM-4BRVP 13.7
GTEX-11WQC-1726-SM-5GU4W 13.5
GTEX-R3RS-0626-SM-48FE1 13.5
GTEX-147F4-2826-SM-5NQBN 12.8
GTEX-11P7K-0726-SM-5EGKX 12.0
GTEX-WYBS-0926-SM-3NM94 12.0
GTEX-XOT4-0726-SM-4GIAW 12.0
GTEX-R55F-1726-SM-2TF4R 11.7
GTEX-W5X1-2326-SM-3GIL6 10.9
GTEX-131XW-0726-SM-5EGK3 8.9
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

45.4

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 45.4
FF:10080-102A8 77 years, female 45.4

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