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TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:32.5TPM
GTEx:49.2RPKM
FANTOM5:30.6Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Medium
Cells in white pulp:Medium
 

Antibody staining

Antibody HPA001400

 

Cells in red pulp

Medium  

Cells in white pulp

Medium  
 
 
 

SPLEEN - HPA RNA-seq

Average TPM

32.5

overview Female, age 60
Sample 1
TPM: 35.9
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 37.0
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 33.4
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 33.9
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 22.5
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

49.2

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 49.2
Samples: 104

Max RPKM: 82.6
Min RPKM: 24.6
Std RPKM: 11.9
Median RPKM: 46.3
GTEX-O5YT-0926-SM-48TDG 82.6
GTEX-ZZPU-0126-SM-5E446 82.4
GTEX-13X6H-0726-SM-5Q5BX 72.4
GTEX-T5JW-0126-SM-4DM6K 71.9
GTEX-U3ZN-0126-SM-4DXUM 70.4
GTEX-QLQW-0126-SM-447BK 70.1
GTEX-WFON-0126-SM-4LVM9 68.5
GTEX-S4Z8-0226-SM-4AD5K 68.3
GTEX-12WSN-0126-SM-5DUX5 68.2
GTEX-VJYA-0126-SM-4KL1P 67.8
GTEX-XAJ8-0126-SM-47JYG 67.8
GTEX-U4B1-0526-SM-4DXTK 66.8
GTEX-QV31-0126-SM-447BP 64.6
GTEX-POMQ-0126-SM-48TD6 64.4
GTEX-ZV6S-0826-SM-5NQ6Z 64.3
GTEX-13S86-0126-SM-5S2PI 62.4
GTEX-QMRM-0226-SM-4R1K7 62.4
GTEX-ZVP2-0526-SM-51MSC 62.4
GTEX-11LCK-0126-SM-5A5M5 61.8
GTEX-145MN-0126-SM-5RQHY 61.1
GTEX-ZP4G-0326-SM-4YCEF 60.5
GTEX-UJHI-0126-SM-4IHLP 60.4
GTEX-XGQ4-0126-SM-4AT4H 58.9
GTEX-144GN-2126-SM-5O99D 58.6
GTEX-12WSJ-0526-SM-5GCOZ 57.8
GTEX-YEC4-0126-SM-4W21T 57.7
GTEX-Z9EW-0726-SM-5HL9H 57.7
GTEX-139YR-0426-SM-5IFFV 57.2
GTEX-146FQ-0626-SM-5LU9U 56.4
GTEX-XMK1-0126-SM-4B65F 56.4
GTEX-ZDTT-1026-SM-5KM19 55.6
GTEX-ZLFU-0526-SM-4WWBN 54.7
GTEX-YFCO-0926-SM-5LUA5 54.0
GTEX-11P81-1326-SM-5GU5S 53.5
GTEX-11XUK-0426-SM-5EQML 53.0
GTEX-1399S-0226-SM-5IFFG 53.0
GTEX-RUSQ-0126-SM-47JWV 52.8
GTEX-Y3I4-0126-SM-4TT26 52.5
GTEX-YB5E-0426-SM-5IFHR 50.4
GTEX-ZYFG-0726-SM-5GIDX 50.4
GTEX-147F3-0126-SM-5NQBJ 50.2
GTEX-Q2AH-0226-SM-48U1I 49.6
GTEX-WHWD-0126-SM-4OORS 49.3
GTEX-UPK5-1626-SM-4JBHI 48.8
GTEX-P4QS-0926-SM-48TBS 48.3
GTEX-11EQ9-0426-SM-5A5JY 48.2
GTEX-13111-0126-SM-5EGHO 48.1
GTEX-OIZH-0926-SM-48TBR 48.0
GTEX-XUJ4-0226-SM-4BOP8 48.0
GTEX-X3Y1-0126-SM-4PQZA 47.5
GTEX-XPVG-0626-SM-4B65B 47.1
GTEX-U3ZH-0126-SM-4DXUK 46.4
GTEX-YB5K-1926-SM-4VDT4 46.2
GTEX-PLZ6-0126-SM-48TC6 46.0
GTEX-Y5LM-0326-SM-4VBRN 46.0
GTEX-13VXT-1326-SM-5LU3Y 45.4
GTEX-X4LF-0226-SM-4QAS8 45.3
GTEX-Y8LW-0126-SM-4VBS1 45.2
GTEX-14DAR-0326-SM-5S2PS 45.0
GTEX-S3XE-0626-SM-4AD6B 44.6
GTEX-X585-1826-SM-4QAS3 44.5
GTEX-QV44-0126-SM-4R1KH 44.2
GTEX-ZPU1-1026-SM-4YCEQ 44.2
GTEX-Y3IK-0126-SM-4WWE9 43.9
GTEX-PX3G-0926-SM-48U12 43.8
GTEX-OOBJ-0926-SM-48TDO 43.3
GTEX-12BJ1-0726-SM-5EGGF 43.2
GTEX-11VI4-0126-SM-5GU6Z 43.0
GTEX-11NSD-0426-SM-5N9CR 42.5
GTEX-146FR-1926-SM-5NQA6 42.2
GTEX-1122O-0526-SM-5N9DM 42.0
GTEX-12WSG-0926-SM-5EGIH 42.0
GTEX-132QS-0226-SM-5IFFZ 41.9
GTEX-QDVN-0526-SM-48TZ4 41.8
GTEX-XV7Q-0126-SM-4BRVK 41.5
GTEX-ZLWG-0426-SM-4WWFA 41.5
GTEX-XQ8I-1726-SM-4BOQB 41.3
GTEX-P4PP-0926-SM-48TBZ 41.1
GTEX-13CF3-0226-SM-5J1NW 40.8
GTEX-13U4I-1626-SM-5IFFR 40.8
GTEX-ZYWO-0226-SM-5GZX3 40.6
GTEX-131XE-1126-SM-5EGHW 40.1
GTEX-11P7K-0426-SM-5BC5H 39.8
GTEX-W5WG-0626-SM-4SOID 39.8
GTEX-13N11-0126-SM-5KM2Z 39.4
GTEX-Q734-0226-SM-48U1A 39.4
GTEX-131XG-0426-SM-5IFGD 39.1
GTEX-R55G-0226-SM-48FEI 39.1
GTEX-QCQG-0226-SM-48U28 38.3
GTEX-XXEK-0126-SM-4BRVU 38.1
GTEX-ZVZP-0726-SM-59HKA 37.6
GTEX-13FH7-1326-SM-5IFG8 36.0
GTEX-ZAB5-0526-SM-5CVMU 36.0
GTEX-PW2O-0126-SM-48TC8 35.4
GTEX-1399R-0226-SM-5IJGG 35.3
GTEX-13PL7-1126-SM-5MR5O 34.4
GTEX-12WSK-0126-SM-5GCO7 33.0
GTEX-117YX-2126-SM-5GIEL 32.5
GTEX-1211K-0426-SM-5FQTP 32.1
GTEX-11DXX-0726-SM-5H12X 30.7
GTEX-13PVR-0326-SM-5RQJY 30.7
GTEX-139T6-0226-SM-5IFGZ 30.3
GTEX-14E6E-1226-SM-5S2R5 30.2
GTEX-Y114-0726-SM-4TT6U 24.6
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

30.6

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 30.6
FF:10025-101D7 39,50,70 years, male 30.6

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