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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:96.9RPKM
FANTOM5:124.6Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Medium
 

Antibody staining

Antibody HPA030542

 

Glial cells

Medium  

Neuronal cells

Medium  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

96.9

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 96.9
Samples: 117

Max RPKM: 142.8
Min RPKM: 36.8
Std RPKM: 23.2
Median RPKM: 101.7
GTEX-11H98-0011-R5b-SM-57WCF 142.8
GTEX-13X6K-0011-R5b-SM-5PNUE 135.4
GTEX-13G51-0011-R5a-SM-5L3EB 132.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 130.9
GTEX-T6MN-0011-R5A-SM-32QPD 129.6
GTEX-P44H-0011-R5A-SM-2XCEX 128.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 127.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 126.5
GTEX-132Q8-0011-R5a-SM-5IJDM 125.5
GTEX-131YS-0011-R5b-SM-5K7YB 125.2
GTEX-WHSE-0011-R5A-SM-3P5ZO 124.7
GTEX-1313W-0011-R5b-SM-5L3EP 124.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 123.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 123.2
GTEX-N7MS-0011-R5a-SM-2HMK8 121.4
GTEX-11OF3-0011-R5a-SM-57WB4 121.3
GTEX-12WSC-0011-R5b-SM-5CVNS 121.2
GTEX-139TT-0011-R5b-SM-5K7W8 121.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 120.5
GTEX-ZUA1-0011-R5b-SM-51MTG 120.4
GTEX-145MH-0011-R5a-SM-5P9JT 120.2
GTEX-1399T-0011-R5b-SM-5IJDK 119.3
GTEX-S7SE-0011-R5A-SM-2XCDA 118.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 116.5
GTEX-RU72-0011-R5A-SM-2TF6U 116.2
GTEX-WWYW-0011-R5A-SM-3NB3E 115.8
GTEX-N7MT-0011-R5a-SM-2I3G6 115.5
GTEX-T5JC-0011-R5A-SM-32PLK 115.5
GTEX-13O3O-0011-R5b-SM-5KM44 114.7
GTEX-QVJO-0011-R5A-SM-2S1QM 114.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 113.8
GTEX-R55E-0011-R5A-SM-2TC5N 113.1
GTEX-WVLH-0011-R5A-SM-3MJFW 112.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 111.9
GTEX-WL46-0011-R5A-SM-3LK6V 111.3
GTEX-13X6I-0011-R5a-SM-5PNWW 111.1
GTEX-WZTO-0011-R5B-SM-3NMC5 110.8
GTEX-X585-0011-R5A-SM-46MVI 110.8
GTEX-11GSP-0011-R5a-SM-57WBE 110.7
GTEX-13FXS-0011-R5b-SM-5LZYE 110.4
GTEX-T2IS-0011-R5A-SM-32QP4 110.1
GTEX-13JUV-0011-R5a-SM-5LZY5 109.7
GTEX-13X6J-0011-R5b-SM-5PNWT 109.5
GTEX-14ABY-0011-R5b-SM-5SI7B 109.3
GTEX-14BIM-0011-R5b-SM-5S2RM 109.3
GTEX-13VXU-0011-R5a-SM-5O9D7 109.1
GTEX-12WSB-0011-R5b-SM-5GU67 108.8
GTEX-13CZV-0011-R5a-SM-5K7XA 108.4
GTEX-12WSA-0011-R5b-SM-5GU5I 108.2
GTEX-13NYS-0011-R5a-SM-5MR4D 108.0
GTEX-11NV4-0011-R5a-SM-5NQ88 107.7
GTEX-145LS-0011-R5a-SM-5SI65 106.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 104.2
GTEX-XMD1-0011-R5A-SM-4AT47 103.9
GTEX-13SLX-0011-R5a-SM-5O9BV 103.2
GTEX-12WSF-0011-R5a-SM-5HL8K 102.7
GTEX-13OW6-0011-R5a-SM-5O9BK 102.6
GTEX-UTHO-0011-R5A-SM-3GIJD 102.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 101.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 100.0
GTEX-13FLV-0011-R5a-SM-5LZWT 98.9
GTEX-RVPV-0011-R5A-SM-2TF69 98.6
GTEX-TSE9-0011-R5A-SM-3DB7J 97.7
GTEX-13OVL-0011-R5b-SM-5L3FU 97.6
GTEX-QMR6-0011-R5A-SM-32PKT 97.5
GTEX-OHPN-0011-R5A-SM-2I5FF 97.4
GTEX-13FLW-0011-R5a-SM-5LZX6 96.5
GTEX-13NYB-0011-R5a-SM-5MR45 95.9
GTEX-RVPU-0011-R5A-SM-2XCAD 95.4
GTEX-NL4W-0011-R5a-SM-2I3GD 94.9
GTEX-13JVG-0011-R5a-SM-5MR4O 94.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 93.9
GTEX-ZE7O-0011-R5a-SM-57WBO 93.0
GTEX-13OVH-0011-R5b-SM-5KM4L 92.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 92.3
GTEX-13OW7-0011-R5b-SM-5O9DM 91.6
GTEX-13S7M-0011-R5b-SM-5P9HS 90.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 89.4
GTEX-PVOW-0011-R5A-SM-32PL7 89.1
GTEX-13OW5-0011-R5b-SM-5L3FR 87.8
GTEX-X4XX-0011-R5A-SM-46MWN 86.8
GTEX-12WSD-0011-R5b-SM-5CVNG 86.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 83.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 83.0
GTEX-Z93S-0011-R5b-SM-4RGNI 83.0
GTEX-YFC4-0011-R5a-SM-4RGLR 82.2
GTEX-XOTO-0011-R5A-SM-4B657 81.3
GTEX-144GO-0011-R5a-SM-5PNUR 80.9
GTEX-ZXG5-0011-R5b-SM-57WBN 79.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 76.4
GTEX-12ZZX-0011-R5a-SM-5HL89 76.0
GTEX-NL3H-0011-R5a-SM-2I3GB 75.6
GTEX-14BIN-0011-R5b-SM-5SI78 75.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 75.5
GTEX-X261-0011-R5A-SM-3NMB4 74.8
GTEX-1445S-0011-R5a-SM-5PNUS 73.1
GTEX-13CIG-0011-R5b-SM-5L3F2 69.9
GTEX-139TS-0011-R5b-SM-5J2MZ 69.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 68.8
GTEX-11WQC-0011-R5a-SM-5BC74 68.5
GTEX-ZVT3-0011-R5a-SM-51MSI 67.8
GTEX-NPJ7-0011-R5a-SM-33HBK 66.6
GTEX-OXRN-0011-R5A-SM-2I5EF 65.3
GTEX-ZV68-0011-R5a-SM-4YCDW 63.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 62.5
GTEX-139T8-0011-R5b-SM-5J1MO 61.2
GTEX-144GL-0011-R5b-SM-5PNUJ 60.5
GTEX-12WSH-0011-R5b-SM-5P9F3 60.2
GTEX-13112-0011-R5b-SM-5DUV8 59.8
GTEX-13FHP-0011-R5b-SM-5LZY2 56.3
GTEX-YJ89-0011-R5a-SM-4V6GM 56.2
GTEX-1477Z-0011-R5b-SM-5PNUO 53.8
GTEX-13CF2-0011-R5a-SM-5LZWS 53.3
GTEX-S7PM-0011-R5A-SM-3NM8G 50.9
GTEX-11UD1-0011-R5b-SM-5P9FP 50.2
GTEX-13NZA-0011-R5b-SM-5KM4K 38.1
GTEX-145MG-0011-R5b-SM-5S2VU 36.8
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

124.6

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 124.6
FF:10379-105H1 89 years, female 139.0
FF:10164-103B2 76 years, female 110.2

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