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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:245.1TPM
GTEx:111.6RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:Medium
Neuronal cells:High
Neuropil:Medium
 

Antibody staining

Antibody HPA030542

 

Endothelial cells

Medium  

Glial cells

Medium  

Neuronal cells

High  

Neuropil

Medium  
 
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

245.1

N/A Male, age 5
Sample 1
TPM: 274.3
overview Female, age 40
Sample 2
TPM: 224.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 236.5
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

111.6

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 109.3
Samples: 114

Max RPKM: 135.8
Min RPKM: 69.4
Std RPKM: 15.7
Median RPKM: 112.6
GTEX-13FXS-3126-SM-5J2NN 135.8
GTEX-X585-3026-SM-46MWF 135.6
GTEX-13FHO-3026-SM-5J1O9 134.7
GTEX-WL46-2926-SM-3LK82 134.7
GTEX-T5JC-2426-SM-3NMDB 134.5
GTEX-WHSE-3026-SM-3P5ZH 134.4
GTEX-WVLH-3026-SM-3MJG9 133.8
GTEX-14BMV-3026-SM-5S2PQ 132.2
GTEX-13FLW-1426-SM-5K7YE 132.0
GTEX-RNOR-2326-SM-2TF4I 131.3
GTEX-WWYW-3126-SM-3NB39 129.3
GTEX-12ZZY-3026-SM-5GCOU 128.5
GTEX-YFC4-3126-SM-5PNV6 127.7
GTEX-1313W-3126-SM-5LZUI 127.0
GTEX-11DXY-3226-SM-5GIDE 126.6
GTEX-T6MN-2626-SM-32PMQ 126.6
GTEX-1192X-3126-SM-5N9BY 126.5
GTEX-WZTO-2926-SM-3NM9I 125.7
GTEX-XLM4-3026-SM-4AT6L 125.6
GTEX-13NYC-2826-SM-5K7WR 125.0
GTEX-R55F-1326-SM-5S2V4 125.0
GTEX-NPJ8-1526-SM-2D7VU 124.1
GTEX-13OW6-3026-SM-5J2MI 122.8
GTEX-13NYS-3126-SM-5KLYV 122.3
GTEX-11OF3-2926-SM-5HL78 121.3
GTEX-12WSC-3026-SM-5GCNF 121.1
GTEX-145MH-3026-SM-5Q5DZ 120.0
GTEX-13OVH-3026-SM-5MR4N 119.8
GTEX-QVJO-1426-SM-2S1QY 119.8
GTEX-ZUA1-3026-SM-59HJC 119.8
GTEX-14ASI-3026-SM-5S2PN 119.3
GTEX-Q2AG-2926-SM-2HMJ3 117.6
GTEX-ZAK1-3026-SM-5S2MJ 117.6
GTEX-ZYFD-3026-SM-5E44C 117.6
GTEX-11GSO-2926-SM-5HL73 117.1
GTEX-12126-1026-SM-5P9JJ 117.0
GTEX-12ZZX-2926-SM-5GCOQ 116.8
GTEX-117XS-3026-SM-5N9CA 116.0
GTEX-132Q8-3026-SM-5PNVG 116.0
GTEX-X4XX-3026-SM-3NMB2 116.0
GTEX-11NUK-2926-SM-5A5MD 115.9
GTEX-13G51-3026-SM-5IJB8 115.8
GTEX-ZVT3-3026-SM-5E43N 115.8
GTEX-13FHP-3026-SM-5IJBS 115.6
GTEX-13VXU-2926-SM-5LU5C 114.9
GTEX-111FC-3126-SM-5GZZ2 114.3
GTEX-11PRG-2926-SM-5987A 114.3
GTEX-11ZUS-2926-SM-5FQSL 114.3
GTEX-145MG-3026-SM-5RQJA 114.2
GTEX-QDT8-2926-SM-32PKC 114.2
GTEX-T2IS-3026-SM-32QPM 114.1
GTEX-QVUS-2826-SM-3GADB 114.0
GTEX-13SLX-3126-SM-5S2Q5 113.7
GTEX-11DXW-1126-SM-5H12Q 113.5
GTEX-PVOW-2526-SM-2XCF7 113.4
GTEX-11GS4-3126-SM-5A5LH 113.3
GTEX-145LS-3126-SM-5Q5BY 113.0
GTEX-145MF-2726-SM-5O995 112.1
GTEX-14A5I-2926-SM-5Q5CQ 112.0
GTEX-XOTO-3026-SM-4B65M 112.0
GTEX-11ONC-2926-SM-5P9JM 111.9
GTEX-13NYB-3026-SM-5IJD7 111.5
GTEX-144GL-3026-SM-5Q5CW 109.7
GTEX-13O3Q-2926-SM-5KM45 109.6
GTEX-Z93S-2926-SM-57WB9 109.6
GTEX-131YS-3126-SM-5KLYT 109.5
GTEX-11OC5-0726-SM-5P9JK 109.0
GTEX-1399T-3026-SM-5KLZC 109.0
GTEX-13OVJ-2826-SM-5L3GW 107.6
GTEX-144FL-3026-SM-5O99C 107.6
GTEX-13QIC-2926-SM-5J2NF 107.5
GTEX-YJ89-3026-SM-5IFJI 107.3
GTEX-RU72-3026-SM-5SI7Y 106.9
GTEX-12ZZZ-3026-SM-5BC67 106.2
GTEX-QMR6-1426-SM-32PLA 106.0
GTEX-1128S-2726-SM-5H12C 105.7
GTEX-13OW8-2826-SM-5L3GC 103.9
GTEX-12WSH-3026-SM-5CVNI 103.7
GTEX-13O3O-3126-SM-5KM3H 103.1
GTEX-ZZPT-3026-SM-5GZXH 103.0
GTEX-TSE9-3026-SM-3DB76 102.7
GTEX-Y111-2726-SM-4TT3N 100.7
GTEX-Y8DK-0826-SM-4TT3T 100.7
GTEX-12ZZW-2926-SM-5LZUP 100.6
GTEX-N7MT-1126-SM-5SI7V 99.5
GTEX-11WQK-3026-SM-5EQL6 99.4
GTEX-UTHO-3026-SM-3GAFB 99.3
GTEX-13S7M-3126-SM-5RQJQ 99.2
GTEX-1117F-3226-SM-5N9CT 96.7
GTEX-OXRN-2426-SM-2I5EQ 96.5
GTEX-NPJ7-2726-SM-2I3FT 96.2
GTEX-13X6K-2926-SM-5Q5D5 95.4
GTEX-ZE7O-3126-SM-5HL5X 95.4
GTEX-139T8-1026-SM-5J2MC 94.1
GTEX-13JVG-3126-SM-5L3FH 93.8
GTEX-ZAJG-3126-SM-5HL9J 93.2
GTEX-11O72-2926-SM-5BC4V 93.0
GTEX-13X6J-3026-SM-5Q5CU 92.3
GTEX-13PL6-3126-SM-5LUAR 89.9
GTEX-11EI6-3026-SM-5GZZO 86.6
GTEX-13PVQ-3026-SM-5SI93 84.1
GTEX-131XW-3126-SM-5LZUC 84.0
GTEX-11EMC-3226-SM-5EGKW 83.8
GTEX-13OW7-3026-SM-5L3GY 83.2
GTEX-12WSD-3126-SM-5HL7P 83.1
GTEX-13JUV-2926-SM-5LZX7 82.8
GTEX-11GSP-3226-SM-5986O 82.1
GTEX-147GR-3026-SM-5S2ML 79.8
GTEX-11TTK-2926-SM-5PNYP 79.2
GTEX-11NV4-2126-SM-5N9DS 79.1
GTEX-PWO3-0926-SM-2I5EY 78.2
GTEX-1445S-3026-SM-5O9BR 76.4
GTEX-13IVO-2926-SM-5L3CZ 70.0
GTEX-12WSA-2926-SM-5EQ4D 69.4
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 114.0
Samples: 108

Max RPKM: 153
Min RPKM: 51.1
Std RPKM: 21.8
Median RPKM: 118.4
GTEX-13X6K-0011-R10a-SM-5P9JR 153.0
GTEX-12ZZY-0011-R10b-SM-5HL7W 152.3
GTEX-145MG-0011-R10a-SM-5PNWG 148.3
GTEX-11H98-0011-R10b-SM-5NQ98 145.9
GTEX-X585-0011-R10A-SM-46MUY 143.0
GTEX-13NYS-0011-R10a-SM-5MR4S 142.9
GTEX-14ASI-0011-R10b-SM-5S2VZ 139.6
GTEX-131XH-0011-R10a-SM-5EGLJ 138.9
GTEX-X4EP-0011-R10B-SM-4QASJ 138.8
GTEX-13CZV-0011-R10b-SM-5LZYD 138.6
GTEX-12WSE-0011-R10b-SM-5P9JV 137.9
GTEX-WWYW-0011-R10A-SM-3NB35 137.5
GTEX-13RTJ-0011-R10b-SM-5O9CW 136.8
GTEX-1313W-0011-R10b-SM-5DUXA 136.1
GTEX-145MH-0011-R10b-SM-5PNUK 135.0
GTEX-13N2G-0011-R10a-SM-5MR34 134.8
GTEX-12WSC-0011-R10a-SM-5GU57 134.0
GTEX-NL3H-0011-R10A-SM-2I3E9 132.9
GTEX-13FHO-0011-R10b-SM-5J2MM 132.2
GTEX-S7SE-0011-R10A-SM-2XCDF 132.1
GTEX-T6MN-0011-R10A-SM-32QP7 131.6
GTEX-XLM4-0011-R10A-SM-4AT5P 131.4
GTEX-WVLH-0011-R10A-SM-3MJFM 130.8
GTEX-NPJ8-0011-R10A-SM-2YUMO 130.3
GTEX-14BIL-0011-R10a-SM-5SI75 130.2
GTEX-13S7M-0011-R10b-SM-5PNZB 130.0
GTEX-WZTO-0011-R10B-SM-4E3KB 129.8
GTEX-132Q8-0011-R10b-SM-5DUWZ 129.7
GTEX-ZVZQ-0011-R10b-SM-51MRT 129.4
GTEX-Q2AG-0011-R10A-SM-2HMLA 129.2
GTEX-T5JC-0011-R10A-SM-32PM2 129.0
GTEX-13FLW-0011-R10b-SM-5LZZF 128.7
GTEX-13N1W-0011-R10b-SM-5MR4H 128.5
GTEX-13O3Q-0011-R10b-SM-5KM39 128.1
GTEX-12WSF-0011-R10a-SM-5LZVH 127.4
GTEX-13SLX-0011-R10a-SM-5P9HV 127.1
GTEX-13X6J-0011-R10b-SM-5PNWA 127.0
GTEX-YFC4-0011-R10a-SM-4SOK5 126.8
GTEX-13QIC-0011-R10a-SM-5O9C7 126.5
GTEX-12ZZX-0011-R10b-SM-5DUWK 126.2
GTEX-N7MS-0011-R10A-SM-2HMJK 125.7
GTEX-147GR-0011-R10b-SM-5S2UM 125.6
GTEX-Y8DK-0011-R10A-SM-4SOK1 125.6
GTEX-13QJC-0011-R10a-SM-5SI63 125.1
GTEX-13O3O-0011-R10a-SM-5LUA9 125.0
GTEX-14BIN-0011-R10a-SM-5S2UA 124.5
GTEX-12WSM-0011-R10a-SM-5DUWV 124.2
GTEX-WL46-0011-R10A-SM-3MJFQ 123.8
GTEX-13FXS-0011-R10a-SM-5J2MA 123.7
GTEX-QVJO-0011-R10A-SM-2S1QJ 122.0
GTEX-131YS-0011-R10b-SM-5EQ5N 119.9
GTEX-YJ89-0011-R10a-SM-4SOK9 119.8
GTEX-13OW7-0011-R10a-SM-5L3H3 118.7
GTEX-13X6I-0011-R10a-SM-5PNWI 118.4
GTEX-X4XX-0011-R10B-SM-46MWO 118.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC 118.0
GTEX-N7MT-0011-R10A-SM-2I3E1 116.7
GTEX-NPJ7-0011-R10A-SM-2I3E5 116.6
GTEX-145LS-0011-R10a-SM-5PNUQ 116.1
GTEX-ZDXO-0011-R10a-SM-4WWD8 115.9
GTEX-ZAB4-0011-R10a-SM-4SOKH 115.4
GTEX-ZF28-0011-R10a-SM-4WWEH 115.3
GTEX-QMR6-0011-R10A-SM-32PKO 114.9
GTEX-13OVJ-0011-R10b-SM-5L3HT 114.6
GTEX-13OVL-0011-R10a-SM-5L3GS 114.5
GTEX-13OW6-0011-R10a-SM-5L3HE 112.3
GTEX-12WSH-0011-R10a-SM-5LZUS 112.2
GTEX-ZUA1-0011-R10a-SM-51MT6 111.9
GTEX-P44H-0011-R10A-SM-2XCEK 111.7
GTEX-147F4-0011-R10b-SM-5S2WC 111.5
GTEX-13NYB-0011-R10a-SM-5KM43 110.0
GTEX-QDT8-0011-R10A-SM-32PKG 108.0
GTEX-Z93S-0011-R10a-SM-4RGNM 106.6
GTEX-ZVT3-0011-R10b-SM-57WB6 105.6
GTEX-13JUV-0011-R10b-SM-5LZXR 105.3
GTEX-13G51-0011-R10b-SM-5LZYF 104.3
GTEX-QVUS-0011-R10A-SM-3GIK3 103.2
GTEX-145LU-0011-R10a-SM-5PNWJ 102.5
GTEX-13FLV-0011-R10b-SM-5LZZ2 101.9
GTEX-RVPU-0011-R10A-SM-2XCAH 100.4
GTEX-XMD1-0011-R10A-SM-4AT4A 99.0
GTEX-13OW8-0011-R10a-SM-5L3H6 98.0
GTEX-12WSD-0011-R10b-SM-5GU79 97.2
GTEX-OXRN-0011-R10A-SM-2I5GC 97.1
GTEX-13SLW-0011-R10a-SM-5S2UI 95.9
GTEX-NL4W-0011-R10A-SM-2I3DY 95.5
GTEX-11WQC-0011-R10a-SM-57WCT 93.8
GTEX-X261-0011-R10B-SM-4E3JT 93.3
GTEX-12126-0011-R10b-SM-5BC6T 92.8
GTEX-11WQK-0011-R10a-SM-5BC6R 92.3
GTEX-139TS-0011-R10a-SM-5K7TU 91.7
GTEX-11ZUS-0011-R10b-SM-5BC79 90.2
GTEX-1445S-0011-R10a-SM-5PNWB 89.8
GTEX-12ZZW-0011-R10b-SM-5HL9X 89.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 88.4
GTEX-TSE9-0011-R10A-SM-3DB7O 87.5
GTEX-13FTZ-0011-R10b-SM-5KLZS 86.8
GTEX-11GSP-0011-R10a-SM-5NQ7J 82.7
GTEX-12WSA-0011-R10b-SM-5P9ET 82.6
GTEX-ZXG5-0011-R10a-SM-57WDD 77.9
GTEX-13JVG-0011-R10b-SM-5KM2P 75.9
GTEX-13NZA-0011-R10b-SM-5KM54 72.5
GTEX-1477Z-0011-R10b-SM-5S2RF 70.1
GTEX-14753-0011-R10b-SM-5S2WE 65.0
GTEX-OXRO-0011-R10A-SM-2I5EH 64.3
GTEX-ZV68-0011-R10a-SM-51MT7 63.9
GTEX-131XW-0011-R10a-SM-5DUVA 55.1
GTEX-13IVO-0011-R10a-SM-5LZY3 51.1
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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