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SH3GL2
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    TISSUE

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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:170.6TPM
GTEx:79.1RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Medium
Neuropil:High
 

Antibody staining

Antibody HPA026685

 

Antibody HPA063573

 

Antibody CAB010056

 

Endothelial cells

Not detected   Not detected   Not detected  

Glial cells

Not detected   Not detected   Not detected  

Neuronal cells

Medium   Not detected   High  

Neuropil

High   Medium   High  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

170.6

N/A Male, age 5
Sample 1
TPM: 198.9
overview Female, age 40
Sample 2
TPM: 80.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 232.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

79.1

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 66.3
Samples: 114

Max RPKM: 149.6
Min RPKM: 13.8
Std RPKM: 25.7
Median RPKM: 67.1
GTEX-11OF3-2926-SM-5HL78 149.6
GTEX-PVOW-2526-SM-2XCF7 125.1
GTEX-13FXS-3126-SM-5J2NN 104.8
GTEX-T5JC-2426-SM-3NMDB 104.8
GTEX-UTHO-3026-SM-3GAFB 103.7
GTEX-QMR6-1426-SM-32PLA 103.5
GTEX-WWYW-3126-SM-3NB39 103.5
GTEX-X585-3026-SM-46MWF 103.2
GTEX-WVLH-3026-SM-3MJG9 101.3
GTEX-WL46-2926-SM-3LK82 101.0
GTEX-TSE9-3026-SM-3DB76 100.7
GTEX-13NYC-2826-SM-5K7WR 100.3
GTEX-Z93S-2926-SM-57WB9 98.7
GTEX-11DXY-3226-SM-5GIDE 96.2
GTEX-14BMV-3026-SM-5S2PQ 95.6
GTEX-Y8DK-0826-SM-4TT3T 95.0
GTEX-X4XX-3026-SM-3NMB2 91.8
GTEX-13NYS-3126-SM-5KLYV 91.3
GTEX-T2IS-3026-SM-32QPM 90.9
GTEX-XLM4-3026-SM-4AT6L 90.5
GTEX-145LS-3126-SM-5Q5BY 89.9
GTEX-132Q8-3026-SM-5PNVG 89.6
GTEX-13FLW-1426-SM-5K7YE 88.8
GTEX-WHSE-3026-SM-3P5ZH 88.8
GTEX-13FHO-3026-SM-5J1O9 88.6
GTEX-1313W-3126-SM-5LZUI 87.7
GTEX-T6MN-2626-SM-32PMQ 87.5
GTEX-145MH-3026-SM-5Q5DZ 87.0
GTEX-ZAK1-3026-SM-5S2MJ 85.5
GTEX-11ZUS-2926-SM-5FQSL 85.2
GTEX-13OW6-3026-SM-5J2MI 84.5
GTEX-YFC4-3126-SM-5PNV6 81.7
GTEX-13VXU-2926-SM-5LU5C 81.0
GTEX-RNOR-2326-SM-2TF4I 80.8
GTEX-14ASI-3026-SM-5S2PN 80.7
GTEX-13SLX-3126-SM-5S2Q5 80.0
GTEX-12ZZX-2926-SM-5GCOQ 79.6
GTEX-WZTO-2926-SM-3NM9I 79.4
GTEX-13OVH-3026-SM-5MR4N 78.8
GTEX-QVJO-1426-SM-2S1QY 78.8
GTEX-ZUA1-3026-SM-59HJC 78.8
GTEX-13O3Q-2926-SM-5KM45 78.4
GTEX-131YS-3126-SM-5KLYT 78.2
GTEX-ZYFD-3026-SM-5E44C 77.5
GTEX-117XS-3026-SM-5N9CA 74.2
GTEX-111FC-3126-SM-5GZZ2 74.0
GTEX-11NUK-2926-SM-5A5MD 74.0
GTEX-12WSC-3026-SM-5GCNF 73.7
GTEX-11PRG-2926-SM-5987A 73.5
GTEX-11O72-2926-SM-5BC4V 71.9
GTEX-R55F-1326-SM-5S2V4 71.7
GTEX-14A5I-2926-SM-5Q5CQ 71.5
GTEX-XOTO-3026-SM-4B65M 70.1
GTEX-1128S-2726-SM-5H12C 69.0
GTEX-12126-1026-SM-5P9JJ 68.3
GTEX-13O3O-3126-SM-5KM3H 68.2
GTEX-1399T-3026-SM-5KLZC 67.4
GTEX-RU72-3026-SM-5SI7Y 66.8
GTEX-ZVT3-3026-SM-5E43N 66.1
GTEX-1192X-3126-SM-5N9BY 65.8
GTEX-11DXW-1126-SM-5H12Q 65.6
GTEX-QVUS-2826-SM-3GADB 64.8
GTEX-YJ89-3026-SM-5IFJI 63.4
GTEX-145MG-3026-SM-5RQJA 63.0
GTEX-12ZZY-3026-SM-5GCOU 62.9
GTEX-QDT8-2926-SM-32PKC 61.8
GTEX-144GL-3026-SM-5Q5CW 61.0
GTEX-145MF-2726-SM-5O995 60.4
GTEX-OXRN-2426-SM-2I5EQ 60.3
GTEX-12ZZZ-3026-SM-5BC67 59.5
GTEX-12WSH-3026-SM-5CVNI 59.4
GTEX-13NYB-3026-SM-5IJD7 59.0
GTEX-13PL6-3126-SM-5LUAR 58.9
GTEX-11GSO-2926-SM-5HL73 58.5
GTEX-13FHP-3026-SM-5IJBS 58.2
GTEX-Q2AG-2926-SM-2HMJ3 57.6
GTEX-13OW8-2826-SM-5L3GC 56.6
GTEX-NPJ8-1526-SM-2D7VU 56.2
GTEX-Y111-2726-SM-4TT3N 55.1
GTEX-13X6J-3026-SM-5Q5CU 54.4
GTEX-13QIC-2926-SM-5J2NF 52.7
GTEX-ZAJG-3126-SM-5HL9J 51.8
GTEX-11ONC-2926-SM-5P9JM 49.8
GTEX-11GS4-3126-SM-5A5LH 47.7
GTEX-12ZZW-2926-SM-5LZUP 47.5
GTEX-NPJ7-2726-SM-2I3FT 46.7
GTEX-13S7M-3126-SM-5RQJQ 46.6
GTEX-11EI6-3026-SM-5GZZO 44.9
GTEX-11OC5-0726-SM-5P9JK 44.8
GTEX-1117F-3226-SM-5N9CT 43.6
GTEX-ZZPT-3026-SM-5GZXH 42.9
GTEX-11WQK-3026-SM-5EQL6 41.9
GTEX-11EMC-3226-SM-5EGKW 41.3
GTEX-N7MT-1126-SM-5SI7V 38.2
GTEX-ZE7O-3126-SM-5HL5X 34.5
GTEX-13X6K-2926-SM-5Q5D5 33.4
GTEX-13OVJ-2826-SM-5L3GW 32.3
GTEX-11NV4-2126-SM-5N9DS 32.2
GTEX-131XW-3126-SM-5LZUC 31.6
GTEX-147GR-3026-SM-5S2ML 31.6
GTEX-13OW7-3026-SM-5L3GY 30.8
GTEX-144FL-3026-SM-5O99C 30.1
GTEX-PWO3-0926-SM-2I5EY 29.5
GTEX-139T8-1026-SM-5J2MC 29.3
GTEX-13PVQ-3026-SM-5SI93 29.1
GTEX-13JVG-3126-SM-5L3FH 29.0
GTEX-13G51-3026-SM-5IJB8 27.3
GTEX-13JUV-2926-SM-5LZX7 25.5
GTEX-12WSD-3126-SM-5HL7P 24.1
GTEX-13IVO-2926-SM-5L3CZ 22.5
GTEX-11TTK-2926-SM-5PNYP 21.6
GTEX-11GSP-3226-SM-5986O 20.2
GTEX-12WSA-2926-SM-5EQ4D 15.8
GTEX-1445S-3026-SM-5O9BR 13.8
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 92.7
Samples: 108

Max RPKM: 190.7
Min RPKM: 9.7
Std RPKM: 43
Median RPKM: 104.3
GTEX-X585-0011-R10A-SM-46MUY 190.7
GTEX-NL3H-0011-R10A-SM-2I3E9 166.4
GTEX-T6MN-0011-R10A-SM-32QP7 160.0
GTEX-132Q8-0011-R10b-SM-5DUWZ 153.4
GTEX-13RTJ-0011-R10b-SM-5O9CW 151.9
GTEX-Y8DK-0011-R10A-SM-4SOK1 151.9
GTEX-QVJO-0011-R10A-SM-2S1QJ 150.0
GTEX-WVLH-0011-R10A-SM-3MJFM 147.3
GTEX-WWYW-0011-R10A-SM-3NB35 145.7
GTEX-X4XX-0011-R10B-SM-46MWO 144.6
GTEX-QDT8-0011-R10A-SM-32PKG 142.8
GTEX-145MH-0011-R10b-SM-5PNUK 142.7
GTEX-WL46-0011-R10A-SM-3MJFQ 142.5
GTEX-1313W-0011-R10b-SM-5DUXA 142.1
GTEX-13O3Q-0011-R10b-SM-5KM39 137.5
GTEX-145MG-0011-R10a-SM-5PNWG 136.2
GTEX-QMR6-0011-R10A-SM-32PKO 135.5
GTEX-QVUS-0011-R10A-SM-3GIK3 135.2
GTEX-13CZV-0011-R10b-SM-5LZYD 133.6
GTEX-131XH-0011-R10a-SM-5EGLJ 131.7
GTEX-WZTO-0011-R10B-SM-4E3KB 130.3
GTEX-NPJ7-0011-R10A-SM-2I3E5 129.1
GTEX-13S7M-0011-R10b-SM-5PNZB 128.5
GTEX-14BIN-0011-R10a-SM-5S2UA 128.4
GTEX-12WSE-0011-R10b-SM-5P9JV 126.8
GTEX-S7SE-0011-R10A-SM-2XCDF 124.9
GTEX-12WSF-0011-R10a-SM-5LZVH 123.7
GTEX-T5JC-0011-R10A-SM-32PM2 122.3
GTEX-13X6K-0011-R10a-SM-5P9JR 122.2
GTEX-ZF28-0011-R10a-SM-4WWEH 122.2
GTEX-Q2AG-0011-R10A-SM-2HMLA 122.1
GTEX-12WSC-0011-R10a-SM-5GU57 121.5
GTEX-11H98-0011-R10b-SM-5NQ98 119.8
GTEX-13NYS-0011-R10a-SM-5MR4S 119.4
GTEX-12ZZX-0011-R10b-SM-5DUWK 119.0
GTEX-14ASI-0011-R10b-SM-5S2VZ 119.0
GTEX-13X6I-0011-R10a-SM-5PNWI 118.7
GTEX-XLM4-0011-R10A-SM-4AT5P 118.2
GTEX-13FHO-0011-R10b-SM-5J2MM 116.1
GTEX-145LS-0011-R10a-SM-5PNUQ 115.5
GTEX-13QIC-0011-R10a-SM-5O9C7 115.4
GTEX-YFC4-0011-R10a-SM-4SOK5 115.4
GTEX-ZVZQ-0011-R10b-SM-51MRT 114.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 114.3
GTEX-13SLX-0011-R10a-SM-5P9HV 113.9
GTEX-131YS-0011-R10b-SM-5EQ5N 113.4
GTEX-12ZZY-0011-R10b-SM-5HL7W 112.8
GTEX-13X6J-0011-R10b-SM-5PNWA 111.5
GTEX-N7MS-0011-R10A-SM-2HMJK 111.5
GTEX-12WSM-0011-R10a-SM-5DUWV 110.6
GTEX-X4EP-0011-R10B-SM-4QASJ 110.5
GTEX-13N1W-0011-R10b-SM-5MR4H 109.9
GTEX-N7MT-0011-R10A-SM-2I3E1 106.7
GTEX-147GR-0011-R10b-SM-5S2UM 104.9
GTEX-ZAB4-0011-R10a-SM-4SOKH 103.7
GTEX-YJ89-0011-R10a-SM-4SOK9 103.1
GTEX-Z93S-0011-R10a-SM-4RGNM 100.5
GTEX-13QJC-0011-R10a-SM-5SI63 96.3
GTEX-13FLW-0011-R10b-SM-5LZZF 95.5
GTEX-13NYB-0011-R10a-SM-5KM43 95.3
GTEX-12WSH-0011-R10a-SM-5LZUS 94.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC 93.7
GTEX-OXRN-0011-R10A-SM-2I5GC 93.7
GTEX-13FXS-0011-R10a-SM-5J2MA 92.7
GTEX-14BIL-0011-R10a-SM-5SI75 89.8
GTEX-13OW7-0011-R10a-SM-5L3H3 86.7
GTEX-13O3O-0011-R10a-SM-5LUA9 82.7
GTEX-13OVL-0011-R10a-SM-5L3GS 81.5
GTEX-13G51-0011-R10b-SM-5LZYF 81.2
GTEX-13OW6-0011-R10a-SM-5L3HE 79.9
GTEX-ZUA1-0011-R10a-SM-51MT6 76.8
GTEX-TSE9-0011-R10A-SM-3DB7O 76.5
GTEX-ZDXO-0011-R10a-SM-4WWD8 74.4
GTEX-P44H-0011-R10A-SM-2XCEK 72.8
GTEX-ZVT3-0011-R10b-SM-57WB6 68.7
GTEX-13OW8-0011-R10a-SM-5L3H6 65.5
GTEX-12126-0011-R10b-SM-5BC6T 61.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 61.4
GTEX-13JUV-0011-R10b-SM-5LZXR 59.7
GTEX-147F4-0011-R10b-SM-5S2WC 58.8
GTEX-145LU-0011-R10a-SM-5PNWJ 58.1
GTEX-RVPU-0011-R10A-SM-2XCAH 54.4
GTEX-13FTZ-0011-R10b-SM-5KLZS 54.1
GTEX-13SLW-0011-R10a-SM-5S2UI 49.2
GTEX-ZXG5-0011-R10a-SM-57WDD 47.0
GTEX-11ZUS-0011-R10b-SM-5BC79 46.0
GTEX-11WQK-0011-R10a-SM-5BC6R 43.8
GTEX-12ZZW-0011-R10b-SM-5HL9X 43.3
GTEX-X261-0011-R10B-SM-4E3JT 41.1
GTEX-13N2G-0011-R10a-SM-5MR34 39.1
GTEX-139TS-0011-R10a-SM-5K7TU 38.9
GTEX-NL4W-0011-R10A-SM-2I3DY 35.8
GTEX-XMD1-0011-R10A-SM-4AT4A 34.2
GTEX-12WSD-0011-R10b-SM-5GU79 32.4
GTEX-OXRO-0011-R10A-SM-2I5EH 32.3
GTEX-11WQC-0011-R10a-SM-57WCT 31.7
GTEX-13OVJ-0011-R10b-SM-5L3HT 31.5
GTEX-13NZA-0011-R10b-SM-5KM54 27.3
GTEX-13IVO-0011-R10a-SM-5LZY3 24.3
GTEX-11GSP-0011-R10a-SM-5NQ7J 22.0
GTEX-ZE7O-0011-R10a-SM-57WAZ 20.7
GTEX-14753-0011-R10b-SM-5S2WE 20.5
GTEX-12WSA-0011-R10b-SM-5P9ET 18.5
GTEX-13JVG-0011-R10b-SM-5KM2P 14.9
GTEX-1477Z-0011-R10b-SM-5S2RF 12.9
GTEX-ZV68-0011-R10a-SM-51MT7 12.9
GTEX-131XW-0011-R10a-SM-5DUVA 12.8
GTEX-1445S-0011-R10a-SM-5PNWB 9.7
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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