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ABCA2
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:52.6RPKM
FANTOM5:118.1Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:High
 

Antibody staining

Antibody HPA042886

 

Glial cells

Medium  

Neuronal cells

High  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

52.6

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 52.6
Samples: 117

Max RPKM: 204.2
Min RPKM: 10.4
Std RPKM: 27.8
Median RPKM: 47.6
GTEX-X4XX-0011-R5A-SM-46MWN 204.2
GTEX-WL46-0011-R5A-SM-3LK6V 168.3
GTEX-RVPV-0011-R5A-SM-2TF69 116.2
GTEX-X585-0011-R5A-SM-46MVI 113.7
GTEX-N7MS-0011-R5a-SM-2HMK8 100.3
GTEX-11NV4-0011-R5a-SM-5NQ88 96.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 94.2
GTEX-13O3O-0011-R5b-SM-5KM44 93.6
GTEX-13X6I-0011-R5a-SM-5PNWW 91.1
GTEX-R55E-0011-R5A-SM-2TC5N 86.8
GTEX-13OVH-0011-R5b-SM-5KM4L 85.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 84.7
GTEX-13FXS-0011-R5b-SM-5LZYE 83.4
GTEX-QMR6-0011-R5A-SM-32PKT 83.4
GTEX-WWYW-0011-R5A-SM-3NB3E 80.8
GTEX-13NYB-0011-R5a-SM-5MR45 78.8
GTEX-PVOW-0011-R5A-SM-32PL7 77.4
GTEX-WZTO-0011-R5B-SM-3NMC5 76.2
GTEX-XOTO-0011-R5A-SM-4B657 75.1
GTEX-Z93S-0011-R5b-SM-4RGNI 73.9
GTEX-XMD1-0011-R5A-SM-4AT47 69.5
GTEX-13FLV-0011-R5a-SM-5LZWT 65.3
GTEX-13X6K-0011-R5b-SM-5PNUE 64.3
GTEX-12WSF-0011-R5a-SM-5HL8K 63.9
GTEX-13SLX-0011-R5a-SM-5O9BV 63.7
GTEX-12WSA-0011-R5b-SM-5GU5I 63.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 62.4
GTEX-132Q8-0011-R5a-SM-5IJDM 62.2
GTEX-WVLH-0011-R5A-SM-3MJFW 61.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 61.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60.9
GTEX-145MH-0011-R5a-SM-5P9JT 60.7
GTEX-131YS-0011-R5b-SM-5K7YB 60.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60.0
GTEX-13FLW-0011-R5a-SM-5LZX6 59.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 59.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 59.9
GTEX-13OW7-0011-R5b-SM-5O9DM 59.5
GTEX-13FHP-0011-R5b-SM-5LZY2 59.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 58.8
GTEX-11GSP-0011-R5a-SM-57WBE 58.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 58.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 57.2
GTEX-ZXG5-0011-R5b-SM-57WBN 56.9
GTEX-14BIN-0011-R5b-SM-5SI78 56.8
GTEX-145LS-0011-R5a-SM-5SI65 56.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 55.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 52.0
GTEX-ZUA1-0011-R5b-SM-51MTG 51.9
GTEX-13OVL-0011-R5b-SM-5L3FU 51.4
GTEX-13JVG-0011-R5a-SM-5MR4O 51.1
GTEX-YFC4-0011-R5a-SM-4RGLR 50.5
GTEX-12WSB-0011-R5b-SM-5GU67 50.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 49.9
GTEX-14BIM-0011-R5b-SM-5S2RM 49.4
GTEX-13VXU-0011-R5a-SM-5O9D7 48.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 47.6
GTEX-13OW6-0011-R5a-SM-5O9BK 47.6
GTEX-RVPU-0011-R5A-SM-2XCAD 47.6
GTEX-144GL-0011-R5b-SM-5PNUJ 47.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 47.3
GTEX-NL4W-0011-R5a-SM-2I3GD 46.5
GTEX-13OW5-0011-R5b-SM-5L3FR 46.1
GTEX-12WSD-0011-R5b-SM-5CVNG 45.5
GTEX-N7MT-0011-R5a-SM-2I3G6 44.8
GTEX-OHPN-0011-R5A-SM-2I5FF 44.4
GTEX-13G51-0011-R5a-SM-5L3EB 44.2
GTEX-11H98-0011-R5b-SM-57WCF 44.1
GTEX-1399T-0011-R5b-SM-5IJDK 44.0
GTEX-NL3H-0011-R5a-SM-2I3GB 43.5
GTEX-WHSE-0011-R5A-SM-3P5ZO 43.4
GTEX-S7SE-0011-R5A-SM-2XCDA 43.3
GTEX-14ABY-0011-R5b-SM-5SI7B 43.2
GTEX-T5JC-0011-R5A-SM-32PLK 43.2
GTEX-1313W-0011-R5b-SM-5L3EP 42.5
GTEX-ZE7O-0011-R5a-SM-57WBO 42.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 41.9
GTEX-UTHO-0011-R5A-SM-3GIJD 40.2
GTEX-RU72-0011-R5A-SM-2TF6U 39.9
GTEX-11OF3-0011-R5a-SM-57WB4 39.1
GTEX-13112-0011-R5b-SM-5DUV8 39.1
GTEX-12WSC-0011-R5b-SM-5CVNS 39.0
GTEX-13X6J-0011-R5b-SM-5PNWT 38.8
GTEX-11WQC-0011-R5a-SM-5BC74 38.5
GTEX-13NYS-0011-R5a-SM-5MR4D 38.1
GTEX-T6MN-0011-R5A-SM-32QPD 37.9
GTEX-13JUV-0011-R5a-SM-5LZY5 35.8
GTEX-P44H-0011-R5A-SM-2XCEX 34.7
GTEX-ZVT3-0011-R5a-SM-51MSI 34.6
GTEX-144GO-0011-R5a-SM-5PNUR 34.5
GTEX-NPJ7-0011-R5a-SM-33HBK 33.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 33.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 33.1
GTEX-12WSH-0011-R5b-SM-5P9F3 32.6
GTEX-1445S-0011-R5a-SM-5PNUS 32.5
GTEX-139TS-0011-R5b-SM-5J2MZ 31.8
GTEX-13CF2-0011-R5a-SM-5LZWS 31.2
GTEX-13CZV-0011-R5a-SM-5K7XA 30.2
GTEX-X261-0011-R5A-SM-3NMB4 29.1
GTEX-TSE9-0011-R5A-SM-3DB7J 29.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 28.6
GTEX-139T8-0011-R5b-SM-5J1MO 28.2
GTEX-OXRN-0011-R5A-SM-2I5EF 26.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 24.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 24.1
GTEX-ZV68-0011-R5a-SM-4YCDW 23.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 23.6
GTEX-12ZZX-0011-R5a-SM-5HL89 23.3
GTEX-1477Z-0011-R5b-SM-5PNUO 22.4
GTEX-YJ89-0011-R5a-SM-4V6GM 21.2
GTEX-11UD1-0011-R5b-SM-5P9FP 19.8
GTEX-139TT-0011-R5b-SM-5K7W8 19.1
GTEX-S7PM-0011-R5A-SM-3NM8G 17.7
GTEX-13CIG-0011-R5b-SM-5L3F2 15.2
GTEX-T2IS-0011-R5A-SM-32QP4 14.4
GTEX-145MG-0011-R5b-SM-5S2VU 10.8
GTEX-13NZA-0011-R5b-SM-5KM4K 10.4
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

118.1

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 118.1
FF:10164-103B2 76 years, female 125.4
FF:10379-105H1 89 years, female 110.8

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