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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ABCA2
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TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:7.4TPM
GTEx:10.5RPKM
FANTOM5:11.5Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA042886

 

Glandular cells

Medium  
 
 
 

PROSTATE - HPA RNA-seq

Average TPM

7.4

overview Male, age 62
Sample 1
TPM: 8.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 10.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 11.1
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 12.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 5.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 9.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 7.3
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 7.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 2.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

10.5

GTEx sample id

RPKM

 

Prostate

Prostate
RPKM: 10.5
Samples: 106

Max RPKM: 20.8
Min RPKM: 2.5
Std RPKM: 3.3
Median RPKM: 10.6
GTEX-RWSA-2026-SM-47JX8 20.8
GTEX-1399R-0526-SM-5IJEF 17.9
GTEX-13FHO-2826-SM-5K7ZA 16.1
GTEX-111FC-2026-SM-5GZYO 15.9
GTEX-SJXC-2026-SM-4DM6N 15.8
GTEX-Y8E4-2126-SM-5RQHO 15.6
GTEX-146FQ-1726-SM-5QGPX 15.5
GTEX-S4Q7-1026-SM-4AD75 15.2
GTEX-WZTO-0926-SM-4PQZ3 15.2
GTEX-XOTO-2826-SM-4B65I 15.0
GTEX-11WQK-2726-SM-5EQMU 14.7
GTEX-WFG8-1826-SM-4LVM4 14.5
GTEX-UTHO-2726-SM-4JBH9 14.3
GTEX-132NY-2826-SM-5P9G2 14.2
GTEX-11ZUS-2126-SM-5N9E6 14.1
GTEX-14ABY-0726-SM-5Q5DF 14.1
GTEX-11OF3-1726-SM-5GU5Q 13.7
GTEX-13NYS-1026-SM-5KLZT 13.6
GTEX-QEG4-2226-SM-4R1JM 13.6
GTEX-13FXS-2826-SM-5LZYC 13.5
GTEX-QV44-1526-SM-4R1KI 13.5
GTEX-V955-1826-SM-4JBIL 13.3
GTEX-11DYG-2526-SM-5N9BB 13.2
GTEX-13N2G-1826-SM-5KM1I 13.1
GTEX-11NSD-0826-SM-5986S 13.0
GTEX-XQ3S-2526-SM-4BOOG 13.0
GTEX-ZUA1-2826-SM-59HLE 13.0
GTEX-QV31-1026-SM-4R1K3 12.9
GTEX-V1D1-1926-SM-4JBGX 12.9
GTEX-145LT-0626-SM-5O99E 12.8
GTEX-11O72-2726-SM-5HL6K 12.7
GTEX-U3ZM-0926-SM-4DXSW 12.6
GTEX-145LV-1226-SM-5S2QH 12.3
GTEX-13OW8-0426-SM-5J2NR 12.2
GTEX-XMK1-1026-SM-4B65H 12.2
GTEX-13G51-2326-SM-5LZXV 12.0
GTEX-14BMV-2326-SM-5RQJ4 12.0
GTEX-11TUW-2126-SM-5GU7B 11.9
GTEX-U4B1-1426-SM-4DXTX 11.9
GTEX-WFON-1626-SM-4LVMV 11.8
GTEX-YB5E-1826-SM-5IFI4 11.7
GTEX-Q2AI-1126-SM-48U19 11.6
GTEX-13O61-1726-SM-5KM46 11.5
GTEX-T8EM-1826-SM-4DM7F 11.4
GTEX-12C56-1326-SM-5FQSV 11.2
GTEX-XPVG-2026-SM-4B65E 11.1
GTEX-12ZZZ-2026-SM-5LZWJ 11.0
GTEX-1399T-1226-SM-5P9J5 10.9
GTEX-NPJ8-2426-SM-3MJHL 10.9
GTEX-SNMC-0926-SM-4DM5U 10.9
GTEX-ZLFU-1726-SM-4WWBU 10.9
GTEX-QMRM-1426-SM-4R1K8 10.7
GTEX-U412-2026-SM-4DXSI 10.7
GTEX-13FTW-1226-SM-5LZZ1 10.6
GTEX-PLZ6-1126-SM-3P5ZR 10.6
GTEX-WOFM-0326-SM-4OOSL 10.5
GTEX-WH7G-1726-SM-4LVKY 10.2
GTEX-XGQ4-1826-SM-4AT6F 10.2
GTEX-117YW-1426-SM-5EGGO 10.1
GTEX-S95S-1026-SM-4B64M 9.9
GTEX-REY6-2126-SM-48FD9 9.8
GTEX-11TT1-2026-SM-5EQM8 9.6
GTEX-SNOS-1026-SM-4DM4Y 9.6
GTEX-XAJ8-0626-SM-47JY4 9.5
GTEX-QLQ7-1326-SM-4R1JY 9.4
GTEX-11P7K-0626-SM-5985Z 9.3
GTEX-ZTTD-2726-SM-57WFA 9.3
GTEX-OOBJ-2026-SM-3NB1R 8.7
GTEX-111CU-1526-SM-5N9FS 8.6
GTEX-14C5O-2826-SM-5RQI6 8.6
GTEX-11EQ9-1726-SM-5HL6U 8.5
GTEX-13O21-1126-SM-5N9EV 8.4
GTEX-ZY6K-1526-SM-5GZXE 8.4
GTEX-131XF-1926-SM-5DUW4 8.3
GTEX-139T6-1526-SM-5P9G6 8.3
GTEX-YJ8A-1126-SM-5IFJU 8.2
GTEX-NFK9-2226-SM-3MJGP 7.9
GTEX-111YS-1726-SM-5GIED 7.8
GTEX-ZTX8-1026-SM-5EGHD 7.8
GTEX-WK11-2626-SM-4OOSK 7.7
GTEX-ZZ64-0926-SM-5E44L 7.7
GTEX-11P82-1126-SM-5BC5K 7.6
GTEX-OIZH-2026-SM-3NB1M 7.5
GTEX-Y9LG-1826-SM-4VBQC 7.5
GTEX-12BJ1-1226-SM-5LUAE 7.3
GTEX-144GM-0826-SM-5O98R 7.3
GTEX-S33H-1826-SM-4AD65 7.3
GTEX-RM2N-1126-SM-48FCY 7.2
GTEX-WFG7-1826-SM-3GIL1 7.1
GTEX-ZDYS-1226-SM-5IJF3 7.1
GTEX-13RTJ-2126-SM-5S2PZ 6.9
GTEX-132QS-1126-SM-5P9GC 6.8
GTEX-X5EB-1826-SM-4E3K8 6.5
GTEX-ZVP2-0826-SM-59HJ6 6.5
GTEX-YF7O-1926-SM-4W1YQ 6.2
GTEX-VJYA-1226-SM-3GIJ6 6.1
GTEX-ZT9W-1626-SM-4YCDQ 6.1
GTEX-13111-1326-SM-5GCNO 5.9
GTEX-U8XE-2526-SM-4E3IT 5.9
GTEX-ZPU1-2026-SM-57WFI 5.8
GTEX-OOBK-2025-SM-3LK5S 5.3
GTEX-117YX-1526-SM-5H12T 5.2
GTEX-148VJ-1826-SM-5Q5DV 4.9
GTEX-14E6E-1126-SM-5S2R4 4.9
GTEX-S3XE-1326-SM-4AD4H 4.9
GTEX-12696-2226-SM-5EQ65 2.5
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

11.5

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 11.5
FF:10022-101D4 73,79,93 years, male 11.5

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