Expression of ATRNL1 in cancer - Summary

CANCER ATLAS

Gene description

Attractin-like 1

Protein class

Predicted intracellular proteins, Predicted membrane proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Liver cancer

STAINING SUMMARY

HPA038070

GENE INFORMATION
Gene name	ATRNL1 (HGNC Symbol)
Synonyms	ALP, FLJ45344, KIAA0534
Description	Attractin-like 1 (HGNC Symbol)
Entrez gene summary
Chromosome	10
Cytoband	q25.3
Chromosome location (bp)	115093365 - 115948992
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000107518 (version 83.38)
Entrez gene	26033
UniProt	Q5VV63 (UniProt - Evidence at transcript level)
neXtProt	NX_Q5VV63
Antibodypedia	ATRNL1 antibodies

PROTEIN BROWSER

ATRNL1-001	ATRNL1-002	ATRNL1-005	ATRNL1-009	ATRNL1-010

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
ATRNL1-001 ENSP00000347152 ENST00000355044	Q5VV63 [Direct mapping] Attractin-like protein 1 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Protein evidence (Kim et al 2014) Show all	GO:0005515 [protein binding] GO:0007186 [G-protein coupled receptor signaling pathway] GO:0016020 [membrane] GO:0016021 [integral component of membrane] GO:0030246 [carbohydrate binding] Show all	1379 aa 152.6 kDa	No	2
ATRNL1-002 ENSP00000476902 ENST00000609571	Q5VV63 [Direct mapping] Attractin-like protein 1 Show all	MEMSAT3 predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins Predicted intracellular proteins Show all	GO:0005515 [protein binding] GO:0016021 [integral component of membrane] GO:0030246 [carbohydrate binding] Show all	467 aa 51.9 kDa	No	0
ATRNL1-005 ENSP00000473412 ENST00000527407	R4GMZ1 [Direct mapping] Attractin-like protein 1 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0005515 [protein binding] Show all	398 aa 44.2 kDa	No	1
ATRNL1-009 ENSP00000431423 ENST00000526946	E9PL90 [Direct mapping] Attractin-like protein 1 Show all	Predicted intracellular proteins Show all	GO:0005515 [protein binding] Show all	252 aa 28 kDa	No	0
ATRNL1-010 ENSP00000434118 ENST00000526373	H0YDQ9 [Direct mapping] Attractin-like protein 1 Show all	Predicted intracellular proteins Show all	GO:0016020 [membrane] Show all	216 aa 23.9 kDa	No	0