Tissue expression of OBFC1 - Staining in colon

COLON - Expression summary

RNA expression

HPA:	15.9	TPM
GTEx:	8.2	RPKM
FANTOM5:	15.1	Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM	15.9

Male, age 54

Sample 1
TPM: 14.4

Cell types%

Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25

Female, age 57

Sample 2
TPM: 13.2

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 80

Sample 3
TPM: 13.3

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 68

Sample 4
TPM: 10.3

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 68

Sample 5
TPM: 13.2

Cell types%

Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70

Female, age 61

Sample 6
TPM: 17.4

Cell types%

Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30

Male, age 80

Sample 7
TPM: 22.4

Cell types%

Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

Female, age 78

Sample 8
TPM: 15.7

Cell types%

Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50

Male, age 84

Sample 9
TPM: 15.1

Cell types%

Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35

Male, age 80

Sample 10
TPM: 20.6

Cell types%

Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45

Female, age 78

Sample 11
TPM: 19.1

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 69

Sample 12
TPM: 18.7

Cell types%

Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45

Female, age 72

Sample 13
TPM: 12.7

Cell types%

Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM	8.2

GTEx sample id

RPKM

Colon - Sigmoid

Colon - Sigmoid
RPKM: 7.6

Samples: 149

Max RPKM: 12
Min RPKM: 4.9
Std RPKM: 1.2
Median RPKM: 7.6

GTEX-11TT1-0926-SM-5GU5M

12.0

GTEX-14C5O-2626-SM-5RQI5

11.4

GTEX-13X6K-2726-SM-5O9DG

10.7

GTEX-131XG-1526-SM-5GCNQ

10.3

GTEX-132NY-2726-SM-5PNY2

10.2

GTEX-11EMC-1426-SM-5N9E4

10.1

GTEX-13OVI-2126-SM-5KM3U

9.9

GTEX-13X6I-2726-SM-5Q5ET

9.8

Show all

Colon - Transverse

Colon - Transverse
RPKM: 8.6

Samples: 196

Max RPKM: 14.6
Min RPKM: 5
Std RPKM: 1.6
Median RPKM: 8.5

GTEX-11TT1-1026-SM-5PNW7

14.6

GTEX-131XG-1826-SM-5LZV4

13.3

GTEX-O5YT-1426-SM-3MJHC

13.2

GTEX-Y5LM-1526-SM-4VDTA

12.9

GTEX-144GN-1126-SM-5LU33

11.9

GTEX-145MN-1726-SM-5SIA6

11.7

GTEX-Q2AI-0926-SM-48U1F

11.7

GTEX-ZYVF-2826-SM-5GIDK

11.7

Show all

COLON - FANTOM5 CAGE

Average Tags Per Million	15.1

FANTOM5 sample id

Sample description

Tags Per Million

Colon
Tags Per Million: 15.1

FF:10014-101C5

62,83,84 years, mixed

15.1