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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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SMC3
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA037411

 

Antibody HPA043206

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
 

Product name

HPA037411   HPA043206  

Host species

Rabbit   Rabbit  

Clonality

pAb   pAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand  

Other gene match

   

Released in version

7   12  

References

   

VALIDATION SUMMARY

 
 

Antibody HPA037411

 

Antibody HPA043206

 
Immunocytochemistry

  Supported  
Immunohistochemistry

Uncertain    
Western blot

Uncertain  

Validated
 
Protein array

Approved   Supported  

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA037411

 

Antibody HPA043206

 

Standard validation

  Supported  

   

Figure description

  Immunofluorescent staining of human cell line U-2 OS shows localization to nucleoplasm.  

Antibody dilution

  1:6  

Literature conformity

  The subcellular location is supported by literature.  

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA037411

 

Antibody HPA043206

 

Standard validation

Uncertain    

   

Figure description

Immunohistochemical staining of human smooth muscle shows strong cytoplasmic positivity in smooth muscle cells.    

Expression

RNA: detected in 37 tissues
Protein: detected in 66 cell types
   

Retrieval

HIER pH6    

Antibody dilution

1:25    

Literature conformity

Consistent with gene/protein characterization data.    

RNA consistency

Consistent with RNA expression data.    

WESTERN BLOT

 
 

Antibody HPA037411

 

Antibody HPA043206

 

Formal validation: Genetic

 
Validated

Downregulation visible in one of two siRNA lanes
 

   

Figure description

  Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: siRNA 1
Lane 3: siRNA 2
Lane 4: Scrambled
 

Target mass (kDa)

  141.5  

Loading control

  Total protein image  

Antibody dilution

  1:58  
 

Standard validation

Uncertain

Analysis performed using a standard panel of samples.
Weak band of predicted size but with additional bands of higher intensity also present.
  Uncertain

Analysis performed using a standard panel of samples.
Weak band of predicted size but with additional bands of higher intensity also present.
 

   

Figure description

   

Target mass (kDa)

141.5   141.5  

Antibody dilution

1:250   1:250  

PROTEIN ARRAY

 
 

Antibody HPA037411

 

Antibody HPA043206

 

Standard validation

Approved

Pass with quality comment low specificity (binding to 1-2 PrESTs >15% and <40%).
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
 

   

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.  

Antibody dilution

1:500   1:500  

ANTIGEN INFORMATION

 
 

Antibody HPA037411

 

Antibody HPA043206

 

Antigen

Recombinant protein fragment   Recombinant protein fragment  

Length (aa)

88   85  

Antigen sequence

EFNKMNLPGEVTFLPLNKLDVRDTAYPETNDAIPMISKLRYNPRFDKAFK
HVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSHRG
 
ALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLD
KKMVTKNDVMNLLESAGFSRSNPYYIVKQGKINQM
 

Matching transcripts

SMC3-001 - ENSP00000354720 [100%]
  SMC3-001 - ENSP00000354720 [100%]
 

Other gene match

   
ANTIGEN VIEW
SMC3-001
 

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.