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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:64.0RPKM
FANTOM5:92.7Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Medium
 

Antibody staining

Antibody HPA004059

 

Antibody HPA004186

 

Glial cells

Medium   Low  

Neuronal cells

Medium   Medium  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

64.0

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 64.0
Samples: 117

Max RPKM: 101.7
Min RPKM: 18.6
Std RPKM: 18
Median RPKM: 67
GTEX-13O3Q-0011-R5b-SM-5P9H4 101.7
GTEX-QVJO-0011-R5A-SM-2S1QM 99.1
GTEX-145MH-0011-R5a-SM-5P9JT 96.3
GTEX-N7MS-0011-R5a-SM-2HMK8 91.4
GTEX-13SLX-0011-R5a-SM-5O9BV 90.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 90.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 89.8
GTEX-RU72-0011-R5A-SM-2TF6U 89.0
GTEX-14BIM-0011-R5b-SM-5S2RM 88.0
GTEX-X585-0011-R5A-SM-46MVI 87.5
GTEX-13G51-0011-R5a-SM-5L3EB 85.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 83.6
GTEX-13OW6-0011-R5a-SM-5O9BK 83.3
GTEX-13OVH-0011-R5b-SM-5KM4L 83.2
GTEX-13NYB-0011-R5a-SM-5MR45 82.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 81.5
GTEX-13X6J-0011-R5b-SM-5PNWT 81.0
GTEX-145LS-0011-R5a-SM-5SI65 80.7
GTEX-Z93S-0011-R5b-SM-4RGNI 80.5
GTEX-13FLW-0011-R5a-SM-5LZX6 80.2
GTEX-1399T-0011-R5b-SM-5IJDK 80.0
GTEX-11OF3-0011-R5a-SM-57WB4 79.8
GTEX-13NYS-0011-R5a-SM-5MR4D 79.5
GTEX-R55E-0011-R5A-SM-2TC5N 79.5
GTEX-13FXS-0011-R5b-SM-5LZYE 79.4
GTEX-WWYW-0011-R5A-SM-3NB3E 79.2
GTEX-13OVL-0011-R5b-SM-5L3FU 79.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 79.0
GTEX-14ABY-0011-R5b-SM-5SI7B 79.0
GTEX-1313W-0011-R5b-SM-5L3EP 77.9
GTEX-13VXU-0011-R5a-SM-5O9D7 77.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 77.8
GTEX-11GSP-0011-R5a-SM-57WBE 77.2
GTEX-13X6K-0011-R5b-SM-5PNUE 75.9
GTEX-ZUA1-0011-R5b-SM-51MTG 75.9
GTEX-13OW5-0011-R5b-SM-5L3FR 75.1
GTEX-T5JC-0011-R5A-SM-32PLK 75.1
GTEX-RVPV-0011-R5A-SM-2TF69 74.4
GTEX-WVLH-0011-R5A-SM-3MJFW 74.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 74.1
GTEX-WZTO-0011-R5B-SM-3NMC5 73.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 72.8
GTEX-13O3O-0011-R5b-SM-5KM44 72.5
GTEX-13OW7-0011-R5b-SM-5O9DM 72.5
GTEX-13X6I-0011-R5a-SM-5PNWW 72.5
GTEX-131YS-0011-R5b-SM-5K7YB 72.2
GTEX-13S7M-0011-R5b-SM-5P9HS 71.7
GTEX-12WSC-0011-R5b-SM-5CVNS 71.5
GTEX-X4XX-0011-R5A-SM-46MWN 71.4
GTEX-NL4W-0011-R5a-SM-2I3GD 70.7
GTEX-WHSE-0011-R5A-SM-3P5ZO 69.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 69.2
GTEX-N7MT-0011-R5a-SM-2I3G6 69.1
GTEX-139TT-0011-R5b-SM-5K7W8 68.6
GTEX-13CZV-0011-R5a-SM-5K7XA 68.6
GTEX-OHPN-0011-R5A-SM-2I5FF 68.5
GTEX-NL3H-0011-R5a-SM-2I3GB 67.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 67.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 67.0
GTEX-11NV4-0011-R5a-SM-5NQ88 66.1
GTEX-RVPU-0011-R5A-SM-2XCAD 66.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 65.5
GTEX-WL46-0011-R5A-SM-3LK6V 65.2
GTEX-S7SE-0011-R5A-SM-2XCDA 64.9
GTEX-144GO-0011-R5a-SM-5PNUR 64.7
GTEX-TSE9-0011-R5A-SM-3DB7J 64.7
GTEX-13FLV-0011-R5a-SM-5LZWT 64.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 63.5
GTEX-12ZZX-0011-R5a-SM-5HL89 63.5
GTEX-12WSF-0011-R5a-SM-5HL8K 62.8
GTEX-132Q8-0011-R5a-SM-5IJDM 62.5
GTEX-T6MN-0011-R5A-SM-32QPD 61.8
GTEX-13JUV-0011-R5a-SM-5LZY5 61.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 60.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60.1
GTEX-XOTO-0011-R5A-SM-4B657 59.6
GTEX-13CIG-0011-R5b-SM-5L3F2 59.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 57.4
GTEX-ZE7O-0011-R5a-SM-57WBO 57.3
GTEX-11H98-0011-R5b-SM-57WCF 56.7
GTEX-ZXG5-0011-R5b-SM-57WBN 56.2
GTEX-14BIN-0011-R5b-SM-5SI78 55.5
GTEX-YFC4-0011-R5a-SM-4RGLR 54.7
GTEX-XMD1-0011-R5A-SM-4AT47 54.2
GTEX-UTHO-0011-R5A-SM-3GIJD 53.8
GTEX-P44H-0011-R5A-SM-2XCEX 53.4
GTEX-OXRN-0011-R5A-SM-2I5EF 52.7
GTEX-PVOW-0011-R5A-SM-32PL7 52.2
GTEX-13JVG-0011-R5a-SM-5MR4O 52.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 49.6
GTEX-12WSB-0011-R5b-SM-5GU67 48.4
GTEX-13112-0011-R5b-SM-5DUV8 46.7
GTEX-144GL-0011-R5b-SM-5PNUJ 45.5
GTEX-12WSA-0011-R5b-SM-5GU5I 43.8
GTEX-11WQC-0011-R5a-SM-5BC74 42.2
GTEX-139T8-0011-R5b-SM-5J1MO 41.6
GTEX-ZV68-0011-R5a-SM-4YCDW 41.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 41.0
GTEX-QMR6-0011-R5A-SM-32PKT 40.9
GTEX-13FHP-0011-R5b-SM-5LZY2 40.2
GTEX-X261-0011-R5A-SM-3NMB4 40.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 38.2
GTEX-ZVT3-0011-R5a-SM-51MSI 38.2
GTEX-12WSH-0011-R5b-SM-5P9F3 37.3
GTEX-1445S-0011-R5a-SM-5PNUS 34.3
GTEX-139TS-0011-R5b-SM-5J2MZ 33.8
GTEX-11UD1-0011-R5b-SM-5P9FP 33.2
GTEX-T2IS-0011-R5A-SM-32QP4 33.0
GTEX-NPJ7-0011-R5a-SM-33HBK 32.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 32.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 31.6
GTEX-1477Z-0011-R5b-SM-5PNUO 31.0
GTEX-13CF2-0011-R5a-SM-5LZWS 30.6
GTEX-S7PM-0011-R5A-SM-3NM8G 29.4
GTEX-145MG-0011-R5b-SM-5S2VU 25.8
GTEX-13NZA-0011-R5b-SM-5KM4K 18.6
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

92.7

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 92.7
FF:10164-103B2 76 years, female 108.2
FF:10379-105H1 89 years, female 77.1

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