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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:86.3TPM
GTEx:65.0RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Medium
Neuronal cells:High
Neuropil:Medium
 

Antibody staining

Antibody HPA004059

 

Antibody HPA004186

 

Endothelial cells

Not detected   Medium  

Glial cells

Medium   Low  

Neuronal cells

High   Low  

Neuropil

Medium   Medium  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

86.3

N/A Male, age 5
Sample 1
TPM: 107.6
overview Female, age 40
Sample 2
TPM: 63.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 88.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

65.0

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 71.1
Samples: 114

Max RPKM: 105.7
Min RPKM: 44.4
Std RPKM: 12.7
Median RPKM: 71.6
GTEX-Z93S-2926-SM-57WB9 105.7
GTEX-ZZPT-3026-SM-5GZXH 100.1
GTEX-13SLX-3126-SM-5S2Q5 99.7
GTEX-X4XX-3026-SM-3NMB2 97.0
GTEX-WWYW-3126-SM-3NB39 95.7
GTEX-Y111-2726-SM-4TT3N 95.2
GTEX-12126-1026-SM-5P9JJ 92.6
GTEX-12ZZX-2926-SM-5GCOQ 92.2
GTEX-1192X-3126-SM-5N9BY 90.4
GTEX-WHSE-3026-SM-3P5ZH 89.5
GTEX-T5JC-2426-SM-3NMDB 89.3
GTEX-NPJ8-1526-SM-2D7VU 86.2
GTEX-QVJO-1426-SM-2S1QY 83.4
GTEX-OXRN-2426-SM-2I5EQ 83.1
GTEX-R55F-1326-SM-5S2V4 83.1
GTEX-ZYFD-3026-SM-5E44C 82.2
GTEX-13JUV-2926-SM-5LZX7 81.5
GTEX-11NV4-2126-SM-5N9DS 81.4
GTEX-X585-3026-SM-46MWF 81.1
GTEX-13OVH-3026-SM-5MR4N 81.0
GTEX-13PL6-3126-SM-5LUAR 80.9
GTEX-WL46-2926-SM-3LK82 80.8
GTEX-Q2AG-2926-SM-2HMJ3 80.7
GTEX-144GL-3026-SM-5Q5CW 79.9
GTEX-14BMV-3026-SM-5S2PQ 79.5
GTEX-YJ89-3026-SM-5IFJI 79.2
GTEX-WVLH-3026-SM-3MJG9 78.9
GTEX-13OW6-3026-SM-5J2MI 78.7
GTEX-RNOR-2326-SM-2TF4I 78.6
GTEX-ZUA1-3026-SM-59HJC 78.2
GTEX-13NYB-3026-SM-5IJD7 77.9
GTEX-117XS-3026-SM-5N9CA 77.8
GTEX-14ASI-3026-SM-5S2PN 77.8
GTEX-XOTO-3026-SM-4B65M 77.8
GTEX-11ZUS-2926-SM-5FQSL 77.6
GTEX-1128S-2726-SM-5H12C 77.5
GTEX-ZAJG-3126-SM-5HL9J 77.5
GTEX-1313W-3126-SM-5LZUI 77.3
GTEX-131YS-3126-SM-5KLYT 76.8
GTEX-13O3Q-2926-SM-5KM45 76.7
GTEX-11DXW-1126-SM-5H12Q 75.9
GTEX-145MF-2726-SM-5O995 75.8
GTEX-12ZZW-2926-SM-5LZUP 75.4
GTEX-11EMC-3226-SM-5EGKW 75.2
GTEX-145MG-3026-SM-5RQJA 74.9
GTEX-13IVO-2926-SM-5L3CZ 74.6
GTEX-T6MN-2626-SM-32PMQ 74.5
GTEX-13QIC-2926-SM-5J2NF 74.4
GTEX-12WSC-3026-SM-5GCNF 74.1
GTEX-131XW-3126-SM-5LZUC 74.0
GTEX-13VXU-2926-SM-5LU5C 74.0
GTEX-11GSO-2926-SM-5HL73 73.9
GTEX-12ZZY-3026-SM-5GCOU 73.7
GTEX-145MH-3026-SM-5Q5DZ 72.6
GTEX-12WSH-3026-SM-5CVNI 72.3
GTEX-11PRG-2926-SM-5987A 71.7
GTEX-ZVT3-3026-SM-5E43N 71.7
GTEX-11EI6-3026-SM-5GZZO 71.6
GTEX-Y8DK-0826-SM-4TT3T 71.6
GTEX-147GR-3026-SM-5S2ML 71.1
GTEX-139T8-1026-SM-5J2MC 70.8
GTEX-WZTO-2926-SM-3NM9I 70.5
GTEX-13NYS-3126-SM-5KLYV 70.4
GTEX-YFC4-3126-SM-5PNV6 70.4
GTEX-13S7M-3126-SM-5RQJQ 70.2
GTEX-ZE7O-3126-SM-5HL5X 70.2
GTEX-11OC5-0726-SM-5P9JK 70.1
GTEX-13NYC-2826-SM-5K7WR 69.6
GTEX-13FLW-1426-SM-5K7YE 69.5
GTEX-11NUK-2926-SM-5A5MD 69.3
GTEX-13OW8-2826-SM-5L3GC 69.0
GTEX-13O3O-3126-SM-5KM3H 68.9
GTEX-13FXS-3126-SM-5J2NN 68.5
GTEX-T2IS-3026-SM-32QPM 68.0
GTEX-RU72-3026-SM-5SI7Y 66.5
GTEX-12WSD-3126-SM-5HL7P 66.1
GTEX-11ONC-2926-SM-5P9JM 65.7
GTEX-145LS-3126-SM-5Q5BY 65.7
GTEX-12ZZZ-3026-SM-5BC67 65.5
GTEX-TSE9-3026-SM-3DB76 65.0
GTEX-NPJ7-2726-SM-2I3FT 64.9
GTEX-11GS4-3126-SM-5A5LH 64.4
GTEX-XLM4-3026-SM-4AT6L 63.9
GTEX-132Q8-3026-SM-5PNVG 63.1
GTEX-1117F-3226-SM-5N9CT 62.8
GTEX-11DXY-3226-SM-5GIDE 62.5
GTEX-12WSA-2926-SM-5EQ4D 62.4
GTEX-1399T-3026-SM-5KLZC 61.4
GTEX-14A5I-2926-SM-5Q5CQ 61.1
GTEX-ZAK1-3026-SM-5S2MJ 61.0
GTEX-11WQK-3026-SM-5EQL6 60.9
GTEX-13OW7-3026-SM-5L3GY 60.6
GTEX-13FHP-3026-SM-5IJBS 59.4
GTEX-13JVG-3126-SM-5L3FH 59.4
GTEX-13X6J-3026-SM-5Q5CU 59.4
GTEX-13PVQ-3026-SM-5SI93 58.7
GTEX-111FC-3126-SM-5GZZ2 58.6
GTEX-UTHO-3026-SM-3GAFB 57.9
GTEX-13FHO-3026-SM-5J1O9 57.7
GTEX-PVOW-2526-SM-2XCF7 56.1
GTEX-144FL-3026-SM-5O99C 54.5
GTEX-13X6K-2926-SM-5Q5D5 53.3
GTEX-QDT8-2926-SM-32PKC 52.2
GTEX-QVUS-2826-SM-3GADB 51.8
GTEX-11GSP-3226-SM-5986O 51.3
GTEX-QMR6-1426-SM-32PLA 51.2
GTEX-1445S-3026-SM-5O9BR 50.9
GTEX-N7MT-1126-SM-5SI7V 50.7
GTEX-11O72-2926-SM-5BC4V 49.6
GTEX-13G51-3026-SM-5IJB8 46.3
GTEX-11OF3-2926-SM-5HL78 45.0
GTEX-11TTK-2926-SM-5PNYP 44.9
GTEX-13OVJ-2826-SM-5L3GW 44.7
GTEX-PWO3-0926-SM-2I5EY 44.4
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 58.5
Samples: 108

Max RPKM: 96.8
Min RPKM: 32.2
Std RPKM: 12.3
Median RPKM: 58.4
GTEX-Z93S-0011-R10a-SM-4RGNM 96.8
GTEX-13OW6-0011-R10a-SM-5L3HE 87.8
GTEX-12126-0011-R10b-SM-5BC6T 85.6
GTEX-X4XX-0011-R10B-SM-46MWO 81.4
GTEX-NL3H-0011-R10A-SM-2I3E9 78.7
GTEX-13OW7-0011-R10a-SM-5L3H3 77.8
GTEX-NL4W-0011-R10A-SM-2I3DY 75.1
GTEX-131XH-0011-R10a-SM-5EGLJ 74.7
GTEX-13O3O-0011-R10a-SM-5LUA9 74.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 73.7
GTEX-12ZZX-0011-R10b-SM-5DUWK 73.3
GTEX-13SLX-0011-R10a-SM-5P9HV 73.3
GTEX-13N1W-0011-R10b-SM-5MR4H 72.8
GTEX-12WSE-0011-R10b-SM-5P9JV 72.5
GTEX-11WQC-0011-R10a-SM-57WCT 71.4
GTEX-YJ89-0011-R10a-SM-4SOK9 71.0
GTEX-ZF28-0011-R10a-SM-4WWEH 70.8
GTEX-12ZZZ-0011-R10a-SM-5P9HC 69.5
GTEX-12WSH-0011-R10a-SM-5LZUS 69.3
GTEX-N7MS-0011-R10A-SM-2HMJK 68.7
GTEX-13OVL-0011-R10a-SM-5L3GS 68.3
GTEX-13FLV-0011-R10b-SM-5LZZ2 68.0
GTEX-13JUV-0011-R10b-SM-5LZXR 67.9
GTEX-Q2AG-0011-R10A-SM-2HMLA 67.6
GTEX-13NYS-0011-R10a-SM-5MR4S 67.5
GTEX-T5JC-0011-R10A-SM-32PM2 67.3
GTEX-TSE9-0011-R10A-SM-3DB7O 66.6
GTEX-ZVZQ-0011-R10b-SM-51MRT 66.5
GTEX-139TS-0011-R10a-SM-5K7TU 66.1
GTEX-13FXS-0011-R10a-SM-5J2MA 66.1
GTEX-13SLW-0011-R10a-SM-5S2UI 65.8
GTEX-14ASI-0011-R10b-SM-5S2VZ 65.4
GTEX-ZVT3-0011-R10b-SM-57WB6 64.6
GTEX-12WSC-0011-R10a-SM-5GU57 64.2
GTEX-1313W-0011-R10b-SM-5DUXA 63.8
GTEX-147GR-0011-R10b-SM-5S2UM 63.7
GTEX-145MG-0011-R10a-SM-5PNWG 63.4
GTEX-12WSM-0011-R10a-SM-5DUWV 62.9
GTEX-13S7M-0011-R10b-SM-5PNZB 62.9
GTEX-QVJO-0011-R10A-SM-2S1QJ 62.7
GTEX-13FTZ-0011-R10b-SM-5KLZS 62.1
GTEX-1477Z-0011-R10b-SM-5S2RF 62.0
GTEX-13QIC-0011-R10a-SM-5O9C7 61.5
GTEX-13OW8-0011-R10a-SM-5L3H6 61.1
GTEX-14BIN-0011-R10a-SM-5S2UA 60.9
GTEX-OXRN-0011-R10A-SM-2I5GC 60.8
GTEX-12WSF-0011-R10a-SM-5LZVH 60.0
GTEX-13QJC-0011-R10a-SM-5SI63 59.8
GTEX-YFC4-0011-R10a-SM-4SOK5 59.6
GTEX-147F4-0011-R10b-SM-5S2WC 59.3
GTEX-145LS-0011-R10a-SM-5PNUQ 59.2
GTEX-WZTO-0011-R10B-SM-4E3KB 59.0
GTEX-13CZV-0011-R10b-SM-5LZYD 58.8
GTEX-WWYW-0011-R10A-SM-3NB35 58.6
GTEX-13G51-0011-R10b-SM-5LZYF 58.2
GTEX-12WSA-0011-R10b-SM-5P9ET 58.0
GTEX-13X6I-0011-R10a-SM-5PNWI 58.0
GTEX-131YS-0011-R10b-SM-5EQ5N 57.9
GTEX-X585-0011-R10A-SM-46MUY 57.8
GTEX-13O3Q-0011-R10b-SM-5KM39 57.5
GTEX-Y8DK-0011-R10A-SM-4SOK1 57.5
GTEX-13IVO-0011-R10a-SM-5LZY3 57.0
GTEX-ZXG5-0011-R10a-SM-57WDD 56.2
GTEX-ZAB4-0011-R10a-SM-4SOKH 55.8
GTEX-145LU-0011-R10a-SM-5PNWJ 55.6
GTEX-12ZZW-0011-R10b-SM-5HL9X 55.2
GTEX-ZDXO-0011-R10a-SM-4WWD8 55.1
GTEX-N7MT-0011-R10A-SM-2I3E1 55.0
GTEX-145MH-0011-R10b-SM-5PNUK 54.9
GTEX-132Q8-0011-R10b-SM-5DUWZ 54.8
GTEX-13X6K-0011-R10a-SM-5P9JR 54.5
GTEX-12ZZY-0011-R10b-SM-5HL7W 54.4
GTEX-13X6J-0011-R10b-SM-5PNWA 54.4
GTEX-11ZUS-0011-R10b-SM-5BC79 53.3
GTEX-13FLW-0011-R10b-SM-5LZZF 53.3
GTEX-13FHO-0011-R10b-SM-5J2MM 53.1
GTEX-WL46-0011-R10A-SM-3MJFQ 53.1
GTEX-13RTJ-0011-R10b-SM-5O9CW 52.6
GTEX-WVLH-0011-R10A-SM-3MJFM 52.2
GTEX-14753-0011-R10b-SM-5S2WE 51.6
GTEX-11WQK-0011-R10a-SM-5BC6R 50.9
GTEX-X261-0011-R10B-SM-4E3JT 50.8
GTEX-S7SE-0011-R10A-SM-2XCDF 50.6
GTEX-14BIL-0011-R10a-SM-5SI75 50.5
GTEX-11GSP-0011-R10a-SM-5NQ7J 50.0
GTEX-13NZA-0011-R10b-SM-5KM54 50.0
GTEX-XLM4-0011-R10A-SM-4AT5P 49.2
GTEX-T6MN-0011-R10A-SM-32QP7 48.7
GTEX-11H98-0011-R10b-SM-5NQ98 48.5
GTEX-13NYB-0011-R10a-SM-5KM43 48.4
GTEX-RVPU-0011-R10A-SM-2XCAH 47.5
GTEX-XMD1-0011-R10A-SM-4AT4A 46.6
GTEX-NPJ7-0011-R10A-SM-2I3E5 45.9
GTEX-ZV68-0011-R10a-SM-51MT7 44.8
GTEX-P44H-0011-R10A-SM-2XCEK 44.4
GTEX-ZUA1-0011-R10a-SM-51MT6 41.9
GTEX-12WSD-0011-R10b-SM-5GU79 39.7
GTEX-131XW-0011-R10a-SM-5DUVA 38.6
GTEX-X4EP-0011-R10B-SM-4QASJ 37.6
GTEX-13JVG-0011-R10b-SM-5KM2P 37.5
GTEX-OXRO-0011-R10A-SM-2I5EH 37.5
GTEX-QMR6-0011-R10A-SM-32PKO 37.2
GTEX-1445S-0011-R10a-SM-5PNWB 36.6
GTEX-13N2G-0011-R10a-SM-5MR34 35.6
GTEX-13OVJ-0011-R10b-SM-5L3HT 35.1
GTEX-QDT8-0011-R10A-SM-32PKG 34.8
GTEX-QVUS-0011-R10A-SM-3GIK3 33.3
GTEX-ZE7O-0011-R10a-SM-57WAZ 32.2
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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