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CDK5RAP3
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:41.1RPKM
FANTOM5:55.8Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Low
 

Antibody staining

Antibody HPA022141

 

Antibody HPA022882

 

Antibody HPA027883

 

Glial cells

Low   Not detected   High  

Neuronal cells

Low   Not detected   Medium  
     
     
     

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

41.1

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 41.1
Samples: 117

Max RPKM: 74.9
Min RPKM: 13.6
Std RPKM: 12.7
Median RPKM: 41
GTEX-X585-0011-R5A-SM-46MVI 74.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 74.3
GTEX-132Q8-0011-R5a-SM-5IJDM 71.9
GTEX-13X6K-0011-R5b-SM-5PNUE 69.3
GTEX-X4XX-0011-R5A-SM-46MWN 64.1
GTEX-14BIM-0011-R5b-SM-5S2RM 62.9
GTEX-XMD1-0011-R5A-SM-4AT47 62.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60.3
GTEX-RVPV-0011-R5A-SM-2TF69 58.1
GTEX-1399T-0011-R5b-SM-5IJDK 57.2
GTEX-QMR6-0011-R5A-SM-32PKT 57.0
GTEX-13NYB-0011-R5a-SM-5MR45 56.9
GTEX-QVJO-0011-R5A-SM-2S1QM 55.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 55.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 54.3
GTEX-WL46-0011-R5A-SM-3LK6V 54.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 53.9
GTEX-13JUV-0011-R5a-SM-5LZY5 53.8
GTEX-13FLW-0011-R5a-SM-5LZX6 53.5
GTEX-13OVH-0011-R5b-SM-5KM4L 53.1
GTEX-12WSF-0011-R5a-SM-5HL8K 52.5
GTEX-13NYS-0011-R5a-SM-5MR4D 52.2
GTEX-T6MN-0011-R5A-SM-32QPD 51.5
GTEX-145MH-0011-R5a-SM-5P9JT 50.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50.4
GTEX-11GSP-0011-R5a-SM-57WBE 50.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 50.0
GTEX-13G51-0011-R5a-SM-5L3EB 49.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 49.2
GTEX-13OW7-0011-R5b-SM-5O9DM 48.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 48.7
GTEX-13SLX-0011-R5a-SM-5O9BV 48.3
GTEX-WWYW-0011-R5A-SM-3NB3E 48.2
GTEX-UTHO-0011-R5A-SM-3GIJD 47.5
GTEX-13S7M-0011-R5b-SM-5P9HS 47.1
GTEX-13VXU-0011-R5a-SM-5O9D7 47.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 46.9
GTEX-YFC4-0011-R5a-SM-4RGLR 46.6
GTEX-WVLH-0011-R5A-SM-3MJFW 46.4
GTEX-TSE9-0011-R5A-SM-3DB7J 46.3
GTEX-WZTO-0011-R5B-SM-3NMC5 46.3
GTEX-12WSC-0011-R5b-SM-5CVNS 46.0
GTEX-13OW6-0011-R5a-SM-5O9BK 45.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 44.6
GTEX-13FLV-0011-R5a-SM-5LZWT 44.5
GTEX-OHPN-0011-R5A-SM-2I5FF 44.2
GTEX-11NV4-0011-R5a-SM-5NQ88 43.9
GTEX-131YS-0011-R5b-SM-5K7YB 43.4
GTEX-RVPU-0011-R5A-SM-2XCAD 43.1
GTEX-XOTO-0011-R5A-SM-4B657 43.1
GTEX-RU72-0011-R5A-SM-2TF6U 42.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 42.1
GTEX-ZUA1-0011-R5b-SM-51MTG 42.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 42.0
GTEX-PVOW-0011-R5A-SM-32PL7 41.9
GTEX-Z93S-0011-R5b-SM-4RGNI 41.5
GTEX-13OVL-0011-R5b-SM-5L3FU 41.4
GTEX-139T8-0011-R5b-SM-5J1MO 41.0
GTEX-145LS-0011-R5a-SM-5SI65 41.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 40.9
GTEX-1313W-0011-R5b-SM-5L3EP 40.8
GTEX-ZE7O-0011-R5a-SM-57WBO 40.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 40.8
GTEX-14ABY-0011-R5b-SM-5SI7B 40.7
GTEX-13O3O-0011-R5b-SM-5KM44 40.5
GTEX-13OW5-0011-R5b-SM-5L3FR 40.4
GTEX-N7MS-0011-R5a-SM-2HMK8 39.7
GTEX-ZXG5-0011-R5b-SM-57WBN 39.7
GTEX-12WSD-0011-R5b-SM-5CVNG 39.4
GTEX-13X6I-0011-R5a-SM-5PNWW 39.3
GTEX-NL4W-0011-R5a-SM-2I3GD 39.3
GTEX-NPJ7-0011-R5a-SM-33HBK 38.9
GTEX-R55E-0011-R5A-SM-2TC5N 38.7
GTEX-X261-0011-R5A-SM-3NMB4 38.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 38.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 38.3
GTEX-11H98-0011-R5b-SM-57WCF 38.2
GTEX-P44H-0011-R5A-SM-2XCEX 37.9
GTEX-S7SE-0011-R5A-SM-2XCDA 37.4
GTEX-13JVG-0011-R5a-SM-5MR4O 35.3
GTEX-13CZV-0011-R5a-SM-5K7XA 35.2
GTEX-12ZZX-0011-R5a-SM-5HL89 35.1
GTEX-11OF3-0011-R5a-SM-57WB4 34.9
GTEX-144GO-0011-R5a-SM-5PNUR 34.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 34.7
GTEX-14BIN-0011-R5b-SM-5SI78 34.5
GTEX-144GL-0011-R5b-SM-5PNUJ 34.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 34.1
GTEX-13X6J-0011-R5b-SM-5PNWT 34.1
GTEX-WHSE-0011-R5A-SM-3P5ZO 32.8
GTEX-139TS-0011-R5b-SM-5J2MZ 31.4
GTEX-NL3H-0011-R5a-SM-2I3GB 30.6
GTEX-T2IS-0011-R5A-SM-32QP4 30.1
GTEX-T5JC-0011-R5A-SM-32PLK 30.1
GTEX-12WSB-0011-R5b-SM-5GU67 28.6
GTEX-13FHP-0011-R5b-SM-5LZY2 28.2
GTEX-11WQC-0011-R5a-SM-5BC74 27.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 27.0
GTEX-12WSA-0011-R5b-SM-5GU5I 26.5
GTEX-ZV68-0011-R5a-SM-4YCDW 26.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 26.1
GTEX-OXRN-0011-R5A-SM-2I5EF 26.0
GTEX-1445S-0011-R5a-SM-5PNUS 25.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 24.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 23.4
GTEX-ZVT3-0011-R5a-SM-51MSI 22.5
GTEX-YJ89-0011-R5a-SM-4V6GM 22.3
GTEX-11UD1-0011-R5b-SM-5P9FP 21.6
GTEX-13CIG-0011-R5b-SM-5L3F2 21.6
GTEX-13112-0011-R5b-SM-5DUV8 19.4
GTEX-12WSH-0011-R5b-SM-5P9F3 19.3
GTEX-1477Z-0011-R5b-SM-5PNUO 19.1
GTEX-13CF2-0011-R5a-SM-5LZWS 18.5
GTEX-139TT-0011-R5b-SM-5K7W8 17.6
GTEX-S7PM-0011-R5A-SM-3NM8G 17.6
GTEX-145MG-0011-R5b-SM-5S2VU 15.8
GTEX-13NZA-0011-R5b-SM-5KM4K 13.6
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

55.8

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 55.8
FF:10164-103B2 76 years, female 62.7
FF:10379-105H1 89 years, female 48.9

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