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CDK5RAP3
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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:45.9TPM
GTEx:39.8RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Low
Neuronal cells:Medium
Neuropil:Not detected
 

Antibody staining

Antibody HPA022141

 

Antibody HPA022882

 

Antibody HPA027883

 

Endothelial cells

Low   Medium   Not detected  

Glial cells

Low   Not detected   Medium  

Neuronal cells

Medium   Low   Medium  

Neuropil

Not detected   Not detected   Medium  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

45.9

N/A Male, age 5
Sample 1
TPM: 34.0
overview Female, age 40
Sample 2
TPM: 60.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 43.5
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

39.8

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 46.7
Samples: 114

Max RPKM: 109.2
Min RPKM: 20.2
Std RPKM: 14.1
Median RPKM: 43.6
GTEX-11OF3-2926-SM-5HL78 109.2
GTEX-ZAJG-3126-SM-5HL9J 85.3
GTEX-QVUS-2826-SM-3GADB 82.2
GTEX-1192X-3126-SM-5N9BY 80.2
GTEX-NPJ8-1526-SM-2D7VU 80.1
GTEX-N7MT-1126-SM-5SI7V 79.1
GTEX-144FL-3026-SM-5O99C 73.7
GTEX-X585-3026-SM-46MWF 70.7
GTEX-1117F-3226-SM-5N9CT 70.4
GTEX-12ZZY-3026-SM-5GCOU 69.4
GTEX-13G51-3026-SM-5IJB8 68.8
GTEX-13FHO-3026-SM-5J1O9 67.2
GTEX-UTHO-3026-SM-3GAFB 61.6
GTEX-13NYS-3126-SM-5KLYV 61.5
GTEX-ZZPT-3026-SM-5GZXH 60.9
GTEX-11GS4-3126-SM-5A5LH 60.1
GTEX-12WSA-2926-SM-5EQ4D 59.9
GTEX-XLM4-3026-SM-4AT6L 58.0
GTEX-13OW8-2826-SM-5L3GC 57.6
GTEX-11OC5-0726-SM-5P9JK 57.4
GTEX-12WSD-3126-SM-5HL7P 56.9
GTEX-QDT8-2926-SM-32PKC 56.9
GTEX-YFC4-3126-SM-5PNV6 55.8
GTEX-111FC-3126-SM-5GZZ2 55.1
GTEX-13VXU-2926-SM-5LU5C 53.1
GTEX-Q2AG-2926-SM-2HMJ3 52.7
GTEX-13OVJ-2826-SM-5L3GW 52.6
GTEX-QMR6-1426-SM-32PLA 52.4
GTEX-13FHP-3026-SM-5IJBS 52.2
GTEX-13NYB-3026-SM-5IJD7 51.8
GTEX-11O72-2926-SM-5BC4V 51.4
GTEX-13OVH-3026-SM-5MR4N 51.2
GTEX-ZVT3-3026-SM-5E43N 50.7
GTEX-139T8-1026-SM-5J2MC 50.6
GTEX-T6MN-2626-SM-32PMQ 50.1
GTEX-X4XX-3026-SM-3NMB2 50.1
GTEX-13FXS-3126-SM-5J2NN 50.0
GTEX-145LS-3126-SM-5Q5BY 49.2
GTEX-145MF-2726-SM-5O995 48.7
GTEX-11ONC-2926-SM-5P9JM 47.8
GTEX-11DXW-1126-SM-5H12Q 47.6
GTEX-13JUV-2926-SM-5LZX7 47.5
GTEX-13FLW-1426-SM-5K7YE 47.4
GTEX-13S7M-3126-SM-5RQJQ 47.4
GTEX-QVJO-1426-SM-2S1QY 47.3
GTEX-NPJ7-2726-SM-2I3FT 46.5
GTEX-RNOR-2326-SM-2TF4I 46.4
GTEX-11EMC-3226-SM-5EGKW 46.2
GTEX-132Q8-3026-SM-5PNVG 45.8
GTEX-13X6K-2926-SM-5Q5D5 45.4
GTEX-145MG-3026-SM-5RQJA 45.3
GTEX-ZE7O-3126-SM-5HL5X 44.5
GTEX-1399T-3026-SM-5KLZC 44.3
GTEX-13SLX-3126-SM-5S2Q5 44.0
GTEX-1313W-3126-SM-5LZUI 43.8
GTEX-147GR-3026-SM-5S2ML 43.8
GTEX-14BMV-3026-SM-5S2PQ 43.7
GTEX-11GSP-3226-SM-5986O 43.4
GTEX-13OW6-3026-SM-5J2MI 43.4
GTEX-1128S-2726-SM-5H12C 43.3
GTEX-11GSO-2926-SM-5HL73 43.2
GTEX-ZYFD-3026-SM-5E44C 43.0
GTEX-12WSH-3026-SM-5CVNI 42.9
GTEX-13QIC-2926-SM-5J2NF 42.6
GTEX-117XS-3026-SM-5N9CA 42.5
GTEX-13OW7-3026-SM-5L3GY 42.3
GTEX-XOTO-3026-SM-4B65M 42.0
GTEX-1445S-3026-SM-5O9BR 41.9
GTEX-T5JC-2426-SM-3NMDB 41.6
GTEX-Y111-2726-SM-4TT3N 41.4
GTEX-144GL-3026-SM-5Q5CW 41.2
GTEX-12WSC-3026-SM-5GCNF 40.8
GTEX-ZAK1-3026-SM-5S2MJ 40.8
GTEX-11EI6-3026-SM-5GZZO 40.7
GTEX-12ZZW-2926-SM-5LZUP 40.6
GTEX-YJ89-3026-SM-5IFJI 40.4
GTEX-WL46-2926-SM-3LK82 40.1
GTEX-13JVG-3126-SM-5L3FH 40.0
GTEX-13O3O-3126-SM-5KM3H 39.4
GTEX-13PL6-3126-SM-5LUAR 38.8
GTEX-145MH-3026-SM-5Q5DZ 38.8
GTEX-RU72-3026-SM-5SI7Y 38.8
GTEX-13NYC-2826-SM-5K7WR 38.2
GTEX-12ZZX-2926-SM-5GCOQ 37.9
GTEX-PWO3-0926-SM-2I5EY 37.7
GTEX-11DXY-3226-SM-5GIDE 37.6
GTEX-13O3Q-2926-SM-5KM45 37.4
GTEX-R55F-1326-SM-5S2V4 37.2
GTEX-14ASI-3026-SM-5S2PN 37.1
GTEX-13IVO-2926-SM-5L3CZ 37.0
GTEX-131YS-3126-SM-5KLYT 36.9
GTEX-13PVQ-3026-SM-5SI93 36.8
GTEX-WZTO-2926-SM-3NM9I 36.8
GTEX-11TTK-2926-SM-5PNYP 36.5
GTEX-14A5I-2926-SM-5Q5CQ 36.0
GTEX-11ZUS-2926-SM-5FQSL 34.8
GTEX-WWYW-3126-SM-3NB39 34.4
GTEX-T2IS-3026-SM-32QPM 34.3
GTEX-12126-1026-SM-5P9JJ 33.7
GTEX-11NUK-2926-SM-5A5MD 33.2
GTEX-Z93S-2926-SM-57WB9 32.6
GTEX-WVLH-3026-SM-3MJG9 31.3
GTEX-ZUA1-3026-SM-59HJC 31.3
GTEX-WHSE-3026-SM-3P5ZH 30.4
GTEX-11PRG-2926-SM-5987A 30.1
GTEX-Y8DK-0826-SM-4TT3T 30.1
GTEX-131XW-3126-SM-5LZUC 30.0
GTEX-13X6J-3026-SM-5Q5CU 29.5
GTEX-OXRN-2426-SM-2I5EQ 29.1
GTEX-11WQK-3026-SM-5EQL6 28.8
GTEX-TSE9-3026-SM-3DB76 28.6
GTEX-PVOW-2526-SM-2XCF7 27.7
GTEX-12ZZZ-3026-SM-5BC67 23.4
GTEX-11NV4-2126-SM-5N9DS 20.2
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 32.5
Samples: 108

Max RPKM: 61.4
Min RPKM: 10.4
Std RPKM: 10.2
Median RPKM: 31
GTEX-RVPU-0011-R10A-SM-2XCAH 61.4
GTEX-XMD1-0011-R10A-SM-4AT4A 61.3
GTEX-13NYS-0011-R10a-SM-5MR4S 53.5
GTEX-13RTJ-0011-R10b-SM-5O9CW 53.4
GTEX-12WSA-0011-R10b-SM-5P9ET 50.4
GTEX-12WSF-0011-R10a-SM-5LZVH 48.3
GTEX-13SLX-0011-R10a-SM-5P9HV 48.1
GTEX-13CZV-0011-R10b-SM-5LZYD 48.0
GTEX-NPJ8-0011-R10A-SM-2YUMO 46.5
GTEX-13FLW-0011-R10b-SM-5LZZF 46.1
GTEX-QMR6-0011-R10A-SM-32PKO 46.0
GTEX-X585-0011-R10A-SM-46MUY 44.8
GTEX-11GSP-0011-R10a-SM-5NQ7J 44.7
GTEX-13OW7-0011-R10a-SM-5L3H3 44.7
GTEX-N7MT-0011-R10A-SM-2I3E1 44.6
GTEX-XLM4-0011-R10A-SM-4AT5P 44.5
GTEX-13FLV-0011-R10b-SM-5LZZ2 43.8
GTEX-13FHO-0011-R10b-SM-5J2MM 43.6
GTEX-ZDXO-0011-R10a-SM-4WWD8 42.4
GTEX-13OW6-0011-R10a-SM-5L3HE 42.2
GTEX-13N1W-0011-R10b-SM-5MR4H 41.9
GTEX-13OVJ-0011-R10b-SM-5L3HT 41.6
GTEX-ZAB4-0011-R10a-SM-4SOKH 41.3
GTEX-QVUS-0011-R10A-SM-3GIK3 40.6
GTEX-11H98-0011-R10b-SM-5NQ98 40.5
GTEX-14BIL-0011-R10a-SM-5SI75 40.4
GTEX-ZE7O-0011-R10a-SM-57WAZ 39.8
GTEX-14ASI-0011-R10b-SM-5S2VZ 39.3
GTEX-QVJO-0011-R10A-SM-2S1QJ 39.3
GTEX-WWYW-0011-R10A-SM-3NB35 38.5
GTEX-13X6K-0011-R10a-SM-5P9JR 38.1
GTEX-X4EP-0011-R10B-SM-4QASJ 37.9
GTEX-13O3O-0011-R10a-SM-5LUA9 37.7
GTEX-13OVL-0011-R10a-SM-5L3GS 37.4
GTEX-132Q8-0011-R10b-SM-5DUWZ 37.3
GTEX-13NYB-0011-R10a-SM-5KM43 36.9
GTEX-YFC4-0011-R10a-SM-4SOK5 36.8
GTEX-13JUV-0011-R10b-SM-5LZXR 36.7
GTEX-T6MN-0011-R10A-SM-32QP7 36.3
GTEX-12WSH-0011-R10a-SM-5LZUS 35.7
GTEX-145MH-0011-R10b-SM-5PNUK 35.6
GTEX-13QIC-0011-R10a-SM-5O9C7 35.0
GTEX-13O3Q-0011-R10b-SM-5KM39 34.3
GTEX-13FXS-0011-R10a-SM-5J2MA 34.2
GTEX-13JVG-0011-R10b-SM-5KM2P 34.2
GTEX-NPJ7-0011-R10A-SM-2I3E5 34.2
GTEX-S7SE-0011-R10A-SM-2XCDF 34.0
GTEX-13OW8-0011-R10a-SM-5L3H6 33.6
GTEX-11WQC-0011-R10a-SM-57WCT 33.4
GTEX-WVLH-0011-R10A-SM-3MJFM 32.9
GTEX-13SLW-0011-R10a-SM-5S2UI 32.6
GTEX-P44H-0011-R10A-SM-2XCEK 31.8
GTEX-Y8DK-0011-R10A-SM-4SOK1 31.3
GTEX-ZF28-0011-R10a-SM-4WWEH 31.2
GTEX-X4XX-0011-R10B-SM-46MWO 30.8
GTEX-131XH-0011-R10a-SM-5EGLJ 30.3
GTEX-ZV68-0011-R10a-SM-51MT7 30.1
GTEX-145LS-0011-R10a-SM-5PNUQ 29.8
GTEX-147F4-0011-R10b-SM-5S2WC 29.8
GTEX-Z93S-0011-R10a-SM-4RGNM 29.8
GTEX-QDT8-0011-R10A-SM-32PKG 29.6
GTEX-T5JC-0011-R10A-SM-32PM2 29.5
GTEX-WZTO-0011-R10B-SM-4E3KB 29.3
GTEX-13FTZ-0011-R10b-SM-5KLZS 29.1
GTEX-NL4W-0011-R10A-SM-2I3DY 29.0
GTEX-Q2AG-0011-R10A-SM-2HMLA 28.5
GTEX-ZVT3-0011-R10b-SM-57WB6 28.5
GTEX-12ZZX-0011-R10b-SM-5DUWK 28.4
GTEX-WL46-0011-R10A-SM-3MJFQ 28.3
GTEX-1477Z-0011-R10b-SM-5S2RF 27.9
GTEX-ZVZQ-0011-R10b-SM-51MRT 27.6
GTEX-1313W-0011-R10b-SM-5DUXA 27.3
GTEX-147GR-0011-R10b-SM-5S2UM 27.3
GTEX-13QJC-0011-R10a-SM-5SI63 27.1
GTEX-13N2G-0011-R10a-SM-5MR34 27.0
GTEX-131YS-0011-R10b-SM-5EQ5N 26.7
GTEX-1445S-0011-R10a-SM-5PNWB 26.7
GTEX-YJ89-0011-R10a-SM-4SOK9 26.7
GTEX-X261-0011-R10B-SM-4E3JT 26.3
GTEX-13G51-0011-R10b-SM-5LZYF 26.1
GTEX-TSE9-0011-R10A-SM-3DB7O 26.1
GTEX-12ZZW-0011-R10b-SM-5HL9X 25.9
GTEX-OXRN-0011-R10A-SM-2I5GC 25.6
GTEX-12WSC-0011-R10a-SM-5GU57 25.4
GTEX-NL3H-0011-R10A-SM-2I3E9 25.0
GTEX-14BIN-0011-R10a-SM-5S2UA 24.9
GTEX-13S7M-0011-R10b-SM-5PNZB 24.7
GTEX-12WSM-0011-R10a-SM-5DUWV 24.6
GTEX-12WSE-0011-R10b-SM-5P9JV 23.2
GTEX-13X6J-0011-R10b-SM-5PNWA 23.1
GTEX-ZUA1-0011-R10a-SM-51MT6 22.8
GTEX-N7MS-0011-R10A-SM-2HMJK 22.7
GTEX-12ZZY-0011-R10b-SM-5HL7W 22.0
GTEX-131XW-0011-R10a-SM-5DUVA 22.0
GTEX-145LU-0011-R10a-SM-5PNWJ 21.0
GTEX-13IVO-0011-R10a-SM-5LZY3 20.8
GTEX-13X6I-0011-R10a-SM-5PNWI 20.7
GTEX-11ZUS-0011-R10b-SM-5BC79 20.0
GTEX-145MG-0011-R10a-SM-5PNWG 19.4
GTEX-13NZA-0011-R10b-SM-5KM54 19.2
GTEX-12126-0011-R10b-SM-5BC6T 17.5
GTEX-12WSD-0011-R10b-SM-5GU79 17.2
GTEX-OXRO-0011-R10A-SM-2I5EH 16.7
GTEX-14753-0011-R10b-SM-5S2WE 16.2
GTEX-ZXG5-0011-R10a-SM-57WDD 14.8
GTEX-11WQK-0011-R10a-SM-5BC6R 11.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC 11.4
GTEX-139TS-0011-R10a-SM-5K7TU 10.4
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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