Tissue expression of B9D1 - Summary - The Human Protein Atlas

We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.

B9D1

TISSUE

CELL

CANCER

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	B9D1
Gene description	B9 protein domain 1
Protein class	Disease related genes Predicted intracellular proteins Predicted secreted proteins
Predicted localization	Intracellular,Secreted
Number of transcripts	11
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Expressed in all
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

General cytoplasmic expression.

DATA RELIABILITY
Data reliability description	Antibody staining mainly consistent with RNA expression data. Pending external verification.
Reliability score	Approved based on 1 antibody. HPA022957
	SHOW MORE

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	B9D1 (HGNC Symbol)
Synonyms	B9, EPPB9, MKS9
Description	B9 protein domain 1 (HGNC Symbol)
Entrez gene summary	This gene encodes a B9 domain-containing protein, one of several that are involved in ciliogenesis. Alterations in expression of this gene have been found in a family with Meckel syndrome. Meckel syndrome has been associated with at least six different genes. This gene is located within the Smith-Magenis syndrome region on chromosome 17. Three alternatively spliced transcript variants that encode different proteins have been described for this gene. [provided by RefSeq, Aug 2011]
Chromosome	17
Cytoband	p11.2
Chromosome location (bp)	19337554 - 19378182
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000108641 (version 83.38)
Entrez gene	27077
UniProt	Q9UPM9 (UniProt - Evidence at transcript level)
neXtProt	NX_Q9UPM9
Antibodypedia	B9D1 antibodies

PROTEIN BROWSER

B9D1-001	B9D1-002	B9D1-003	B9D1-004	B9D1-005	B9D1-006	B9D1-008	B9D1-010	B9D1-012	B9D1-013	B9D1-014

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
B9D1-001 ENSP00000261499 ENST00000261499	Q9UPM9 [Direct mapping] B9 domain-containing protein 1 Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Disease related genes Protein evidence (Kim et al 2014) Show all	GO:0001701 [in utero embryonic development] GO:0001944 [vasculature development] GO:0005515 [protein binding] GO:0005813 [centrosome] GO:0005829 [cytosol] GO:0006996 [organelle organization] GO:0007224 [smoothened signaling pathway] GO:0008158 [hedgehog receptor activity] GO:0016020 [membrane] GO:0032880 [regulation of protein localization] GO:0035869 [ciliary transition zone] GO:0036038 [TCTN-B9D complex] GO:0036064 [ciliary basal body] GO:0042384 [cilium assembly] GO:0042733 [embryonic digit morphogenesis] GO:0043010 [camera-type eye development] GO:0060271 [cilium morphogenesis] GO:0060563 [neuroepithelial cell differentiation] Show all	204 aa 22.8 kDa	Yes	0
B9D1-002 ENSP00000460939 ENST00000477478	I3L435 [Direct mapping] B9 domain-containing protein 1 Show all	Phobius predicted secreted proteins Predicted intracellular proteins Show all		213 aa 23.1 kDa	No	0
B9D1-003 ENSP00000268841 ENST00000268841	Q9UPM9 [Direct mapping] B9 domain-containing protein 1 Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Disease related genes Show all	GO:0005813 [centrosome] GO:0005829 [cytosol] GO:0006996 [organelle organization] GO:0007224 [smoothened signaling pathway] GO:0008158 [hedgehog receptor activity] GO:0035869 [ciliary transition zone] GO:0036038 [TCTN-B9D complex] GO:0036064 [ciliary basal body] GO:0042384 [cilium assembly] GO:0060271 [cilium morphogenesis] Show all	153 aa 16.9 kDa	Yes	0
B9D1-004 ENSP00000410835 ENST00000440841	H7C3B7 [Direct mapping] B9 domain-containing protein 1 Show all	Predicted intracellular proteins Show all		133 aa 14.9 kDa	No	0
B9D1-005 ENSP00000378978 ENST00000395616	A8MYG7 [Direct mapping] B9 domain-containing protein 1 Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all		187 aa 21 kDa	Yes	0
B9D1-006 ENSP00000378977 ENST00000395615	A8MTX4 [Direct mapping] B9 domain-containing protein 1 Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all		161 aa 18 kDa	Yes	0
B9D1-008 ENSP00000433359 ENST00000461069	A0A0B4J223 [Direct mapping] B9 domain-containing protein 1 Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all		186 aa 20.7 kDa	Yes	0
B9D1-010 ENSP00000463255 ENST00000487415	J3QKV6 [Direct mapping] B9 domain-containing protein 1 Show all	SPOCTOPUS predicted secreted proteins Predicted intracellular proteins Show all		19 aa 1.9 kDa	No	0
B9D1-012 ENSP00000462565 ENST00000574508	J3KSN2 [Direct mapping] B9 domain-containing protein 1 Show all	Phobius predicted secreted proteins Predicted intracellular proteins Show all		106 aa 11.4 kDa	No	0
B9D1-013 ENSP00000458525 ENST00000575478	I3L126 [Direct mapping] B9 domain-containing protein 1 Show all	Phobius predicted secreted proteins Predicted intracellular proteins Show all		140 aa 15.1 kDa	No	0
B9D1-014 ENSP00000459857 ENST00000575403	I3L2R1 [Direct mapping] B9 domain-containing protein 1 Show all	Phobius predicted secreted proteins Predicted intracellular proteins Show all		147 aa 15.7 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.