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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:156.5TPM
GTEx:118.4RPKM
FANTOM5:447.6Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Chondrocytes:Low
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA008445

  

Antibody CAB016200

  

Antibody CAB021109

  

Antibody CAB047350

  

Adipocytes

 Medium   Not detected   Medium   Not detected  

Fibroblasts

 Medium   Not detected   Not detected  

Chondrocytes

 Medium   Medium  

Peripheral nerve

 Not detected  
          
       
       
       

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Medium
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA008445

  

Antibody CAB016200

  

Antibody CAB021109

  

Antibody CAB047350

  

Adipocytes

 Medium   Not detected   Medium   Not detected  

Fibroblasts

 Medium   Medium   Low   Not detected  

Peripheral nerve

 Medium   Low   Low  
          
       
       
       

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

156.5
N/A Female, age 80
Sample 1
TPM: 200.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 166.2
N/A Female, age 57
Sample 3
TPM: 141.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 159.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 114.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

118.4

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 113.5
Samples: 350

Max RPKM: 182.2
Min RPKM: 61.3
Std RPKM: 21.9
Median RPKM: 111.4
GTEX-11DXX-2326-SM-5Q5A2 182.2
GTEX-ZDTT-2626-SM-5S2OP 180.8
GTEX-Y5V6-2526-SM-5IFJV 176.9
GTEX-QEG5-0326-SM-2S1PB 164.9
GTEX-ZYVF-0226-SM-5GIEG 164.5
GTEX-S3XE-1626-SM-3K2AJ 164.4
GTEX-11P82-1726-SM-5Q5AT 164.1
GTEX-ZZ64-1626-SM-5E43W 163.7
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 125.8
Samples: 227

Max RPKM: 216
Min RPKM: 73.2
Std RPKM: 21.1
Median RPKM: 124.7
GTEX-Y5LM-0826-SM-4VDSW 216.0
GTEX-ZYVF-1026-SM-5E44V 201.2
GTEX-1339X-0726-SM-5L3FF 178.6
GTEX-U8XE-1926-SM-3DB98 175.1
GTEX-13FH7-1926-SM-5J2OL 168.4
GTEX-ZT9W-1026-SM-57WG5 167.9
GTEX-1128S-0926-SM-5GZZU 167.8
GTEX-132QS-0826-SM-5K7WV 164.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

447.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 447.6
FF:10010-101C1 65,65,76 years, mixed 447.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.