Tissue expression of CCDC34 - Staining in colon

COLON - Expression summary

RNA expression

HPA:	5.5	TPM
GTEx:	1.5	RPKM
FANTOM5:	12.9	Tags Per Million

COLON - Annotated protein expression

Antibody staining	Antibody HPA037574
Endothelial cells	Low
Glandular cells	Medium

COLON - HPA RNA-seq

Average TPM	5.5

Male, age 54

Sample 1
TPM: 6.1

Cell types%

Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25

Female, age 57

Sample 2
TPM: 4.5

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 80

Sample 3
TPM: 5.4

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 68

Sample 4
TPM: 6.6

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 68

Sample 5
TPM: 3.6

Cell types%

Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70

Female, age 61

Sample 6
TPM: 4.8

Cell types%

Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30

Male, age 80

Sample 7
TPM: 8.7

Cell types%

Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

Female, age 78

Sample 8
TPM: 5.6

Cell types%

Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50

Male, age 84

Sample 9
TPM: 4.1

Cell types%

Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35

Male, age 80

Sample 10
TPM: 8.7

Cell types%

Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45

Female, age 78

Sample 11
TPM: 5.2

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 69

Sample 12
TPM: 5.2

Cell types%

Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45

Female, age 72

Sample 13
TPM: 3.3

Cell types%

Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM	1.5

GTEx sample id

RPKM

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.1

Samples: 149

Max RPKM: 2.7
Min RPKM: 0.1
Std RPKM: 0.4
Median RPKM: 1

GTEX-ZVZQ-2626-SM-59HLB

2.7

GTEX-ZE7O-2626-SM-51MSS

2.4

GTEX-ZAB5-1426-SM-5HL9D

2.1

GTEX-ZF28-2526-SM-57WFH

2.1

GTEX-12WSG-2426-SM-5EQLZ

2.0

GTEX-12ZZX-2726-SM-5N9FT

2.0

GTEX-145LS-2926-SM-5O99G

2.0

GTEX-XUJ4-2126-SM-4BOOX

2.0

Show all

Colon - Transverse

Colon - Transverse
RPKM: 1.8

Samples: 196

Max RPKM: 4.6
Min RPKM: 0.3
Std RPKM: 0.9
Median RPKM: 1.7

GTEX-1128S-1626-SM-5H12O

4.6

GTEX-XV7Q-2126-SM-4BRVX

4.5

GTEX-XMK1-1726-SM-4B64Z

4.4

GTEX-146FQ-1926-SM-5NQBY

4.0

GTEX-QDVN-1326-SM-48TZ3

3.9

GTEX-11VI4-1526-SM-5EQKC

3.8

GTEX-R53T-1326-SM-48FCQ

3.8

GTEX-13O21-2426-SM-5MR4A

3.6

Show all

COLON - FANTOM5 CAGE

Average Tags Per Million	12.9

FANTOM5 sample id

Sample description

Tags Per Million

Colon
Tags Per Million: 12.9

FF:10014-101C5

62,83,84 years, mixed

12.9