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COMMD9

GENERAL INFORMATION

Gene name

 COMMD9

Gene description

 COMM domain containing 9

Protein class

 Predicted intracellular proteins

Predicted localization

 Intracellular

Number of transcripts

 3
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category
HPA:Expressed in all
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

 Evidence at protein level

Protein expression

 Generals cytoplasmic, sometimes additional nuclear, expression.

DATA RELIABILITY

Data reliability
description

 Antibody staining mainly consistent with RNA expression data.

Reliability score

 Uncertain based on 1 antibody.
HPA009142
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RNA AND PROTEIN EXPRESSION SUMMARY
RNA expression (TPM) Protein expression (score)
Brain
Caudate
N/A
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Bronchus
N/A
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Vagina
N/A
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW
Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

 COMMD9 (HGNC Symbol)

Synonyms

 FLJ31106, HSPC166

Description

 COMM domain containing 9 (HGNC Symbol)

Entrez gene summary

Chromosome

 11

Cytoband

 p13

Chromosome location (bp)

 36269284 - 36289449

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000110442 (version 83.38)

Entrez gene

 29099

UniProt

 Q9P000 (UniProt - Evidence at protein level)

neXtProt

 NX_Q9P000

Antibodypedia

 COMMD9 antibodies

PROTEIN BROWSER
COMMD9-001
COMMD9-003
COMMD9-005

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
COMMD9-001
ENSP00000263401
ENST00000263401
Q9P000 [Direct mapping]
COMM domain-containing protein 9
Q53FR9 [Target identity:100%; Query identity:100%]
COMM domain containing 9 variant; COMM domain containing 9, isoform CRA_b; cDNA FLJ31106 fis, clone IMR322000144, highly similar to COMM domain-containing protein 9; cDNA FLJ78335, highly similar to Homo sapiens COMM domain containing 9, mRNA; cDNA, FLJ95283, highly similar to Homo sapiens COMM domain containing 9 (COMMD9), mRNA
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Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006351 [transcription, DNA-templated]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0006814 [sodium ion transport]
GO:0016023 [cytoplasmic membrane-bounded vesicle]
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 198 aa
21.8 kDa 		No 0
COMMD9-003
ENSP00000392510
ENST00000452374
Q9P000 [Direct mapping]
COMM domain-containing protein 9
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Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006351 [transcription, DNA-templated]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0006814 [sodium ion transport]
GO:0016023 [cytoplasmic membrane-bounded vesicle]
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 156 aa
17.3 kDa 		No 0
COMMD9-005
ENSP00000435599
ENST00000532705
E9PJ95 [Direct mapping]
COMM domain-containing protein 9
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
 185 aa
20.7 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.