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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:491.9TPM
GTEx:248.5RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Medium
Neuronal cells:Medium
Neuropil:Medium
 

Antibody staining

Antibody HPA001520

 

Antibody HPA001528

 

Antibody CAB017527

 

Endothelial cells

Low   Medium   Not detected  

Glial cells

Low   Medium   Not detected  

Neuronal cells

Medium   High   Medium  

Neuropil

Medium   Medium   Low  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

491.9

N/A Male, age 5
Sample 1
TPM: 500.1
overview Female, age 40
Sample 2
TPM: 468.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 506.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

248.5

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 249.0
Samples: 114

Max RPKM: 380.9
Min RPKM: 109.4
Std RPKM: 58.8
Median RPKM: 252.3
GTEX-PVOW-2526-SM-2XCF7 380.9
GTEX-WVLH-3026-SM-3MJG9 357.6
GTEX-TSE9-3026-SM-3DB76 356.2
GTEX-T5JC-2426-SM-3NMDB 351.5
GTEX-T2IS-3026-SM-32QPM 346.2
GTEX-14BMV-3026-SM-5S2PQ 335.8
GTEX-13FXS-3126-SM-5J2NN 332.6
GTEX-WL46-2926-SM-3LK82 325.9
GTEX-RNOR-2326-SM-2TF4I 325.3
GTEX-11DXY-3226-SM-5GIDE 323.8
GTEX-ZUA1-3026-SM-59HJC 323.4
GTEX-WHSE-3026-SM-3P5ZH 322.0
GTEX-WZTO-2926-SM-3NM9I 320.0
GTEX-145MH-3026-SM-5Q5DZ 319.0
GTEX-13FHO-3026-SM-5J1O9 317.7
GTEX-117XS-3026-SM-5N9CA 313.8
GTEX-12WSC-3026-SM-5GCNF 313.4
GTEX-T6MN-2626-SM-32PMQ 313.2
GTEX-13SLX-3126-SM-5S2Q5 312.0
GTEX-13VXU-2926-SM-5LU5C 305.3
GTEX-ZYFD-3026-SM-5E44C 304.4
GTEX-11OF3-2926-SM-5HL78 301.9
GTEX-QVJO-1426-SM-2S1QY 301.6
GTEX-11GSO-2926-SM-5HL73 301.4
GTEX-1313W-3126-SM-5LZUI 300.6
GTEX-WWYW-3126-SM-3NB39 298.9
GTEX-11PRG-2926-SM-5987A 297.4
GTEX-ZAK1-3026-SM-5S2MJ 294.1
GTEX-11ZUS-2926-SM-5FQSL 292.8
GTEX-12126-1026-SM-5P9JJ 290.1
GTEX-11NUK-2926-SM-5A5MD 288.3
GTEX-YFC4-3126-SM-5PNV6 285.4
GTEX-13OW6-3026-SM-5J2MI 284.4
GTEX-14ASI-3026-SM-5S2PN 282.8
GTEX-13FLW-1426-SM-5K7YE 282.3
GTEX-X585-3026-SM-46MWF 282.2
GTEX-13OW8-2826-SM-5L3GC 282.0
GTEX-XLM4-3026-SM-4AT6L 281.8
GTEX-145MF-2726-SM-5O995 281.3
GTEX-12ZZX-2926-SM-5GCOQ 280.6
GTEX-UTHO-3026-SM-3GAFB 280.6
GTEX-13O3Q-2926-SM-5KM45 279.9
GTEX-QMR6-1426-SM-32PLA 279.5
GTEX-131YS-3126-SM-5KLYT 278.8
GTEX-12ZZY-3026-SM-5GCOU 275.8
GTEX-XOTO-3026-SM-4B65M 274.9
GTEX-144GL-3026-SM-5Q5CW 272.9
GTEX-11OC5-0726-SM-5P9JK 272.2
GTEX-13NYC-2826-SM-5K7WR 271.4
GTEX-13OVH-3026-SM-5MR4N 271.4
GTEX-Z93S-2926-SM-57WB9 264.0
GTEX-X4XX-3026-SM-3NMB2 261.4
GTEX-145LS-3126-SM-5Q5BY 257.7
GTEX-13NYB-3026-SM-5IJD7 255.3
GTEX-Q2AG-2926-SM-2HMJ3 254.7
GTEX-13NYS-3126-SM-5KLYV 254.6
GTEX-YJ89-3026-SM-5IFJI 252.5
GTEX-Y8DK-0826-SM-4TT3T 252.1
GTEX-13O3O-3126-SM-5KM3H 251.6
GTEX-Y111-2726-SM-4TT3N 251.4
GTEX-11ONC-2926-SM-5P9JM 251.3
GTEX-145MG-3026-SM-5RQJA 246.9
GTEX-111FC-3126-SM-5GZZ2 245.8
GTEX-11DXW-1126-SM-5H12Q 244.9
GTEX-QVUS-2826-SM-3GADB 244.9
GTEX-132Q8-3026-SM-5PNVG 244.1
GTEX-1192X-3126-SM-5N9BY 242.8
GTEX-R55F-1326-SM-5S2V4 237.9
GTEX-1399T-3026-SM-5KLZC 237.4
GTEX-QDT8-2926-SM-32PKC 237.0
GTEX-1128S-2726-SM-5H12C 236.9
GTEX-13FHP-3026-SM-5IJBS 236.3
GTEX-14A5I-2926-SM-5Q5CQ 235.4
GTEX-OXRN-2426-SM-2I5EQ 235.1
GTEX-13OVJ-2826-SM-5L3GW 229.8
GTEX-12ZZZ-3026-SM-5BC67 228.8
GTEX-ZVT3-3026-SM-5E43N 225.9
GTEX-12ZZW-2926-SM-5LZUP 223.5
GTEX-13X6J-3026-SM-5Q5CU 221.7
GTEX-11GS4-3126-SM-5A5LH 218.3
GTEX-ZE7O-3126-SM-5HL5X 213.7
GTEX-12WSH-3026-SM-5CVNI 211.7
GTEX-11WQK-3026-SM-5EQL6 209.1
GTEX-RU72-3026-SM-5SI7Y 207.2
GTEX-NPJ7-2726-SM-2I3FT 203.0
GTEX-NPJ8-1526-SM-2D7VU 196.8
GTEX-131XW-3126-SM-5LZUC 196.0
GTEX-144FL-3026-SM-5O99C 194.0
GTEX-139T8-1026-SM-5J2MC 193.4
GTEX-11EMC-3226-SM-5EGKW 188.5
GTEX-13QIC-2926-SM-5J2NF 187.9
GTEX-13JVG-3126-SM-5L3FH 186.1
GTEX-13X6K-2926-SM-5Q5D5 182.9
GTEX-11O72-2926-SM-5BC4V 181.4
GTEX-13PL6-3126-SM-5LUAR 181.3
GTEX-1117F-3226-SM-5N9CT 180.0
GTEX-11TTK-2926-SM-5PNYP 180.0
GTEX-13S7M-3126-SM-5RQJQ 179.9
GTEX-12WSD-3126-SM-5HL7P 174.4
GTEX-11EI6-3026-SM-5GZZO 173.7
GTEX-13PVQ-3026-SM-5SI93 171.2
GTEX-13JUV-2926-SM-5LZX7 170.2
GTEX-13OW7-3026-SM-5L3GY 163.8
GTEX-PWO3-0926-SM-2I5EY 162.5
GTEX-13G51-3026-SM-5IJB8 161.8
GTEX-N7MT-1126-SM-5SI7V 158.9
GTEX-11GSP-3226-SM-5986O 155.4
GTEX-1445S-3026-SM-5O9BR 154.7
GTEX-ZZPT-3026-SM-5GZXH 153.4
GTEX-11NV4-2126-SM-5N9DS 150.5
GTEX-ZAJG-3126-SM-5HL9J 150.5
GTEX-147GR-3026-SM-5S2ML 132.5
GTEX-13IVO-2926-SM-5L3CZ 123.0
GTEX-12WSA-2926-SM-5EQ4D 109.4
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 247.9
Samples: 108

Max RPKM: 397.9
Min RPKM: 79.9
Std RPKM: 75.7
Median RPKM: 253.8
GTEX-12ZZY-0011-R10b-SM-5HL7W 397.9
GTEX-T6MN-0011-R10A-SM-32QP7 390.9
GTEX-X585-0011-R10A-SM-46MUY 372.7
GTEX-T5JC-0011-R10A-SM-32PM2 368.3
GTEX-12WSC-0011-R10a-SM-5GU57 366.4
GTEX-1313W-0011-R10b-SM-5DUXA 357.9
GTEX-WL46-0011-R10A-SM-3MJFQ 357.4
GTEX-WVLH-0011-R10A-SM-3MJFM 352.2
GTEX-145MH-0011-R10b-SM-5PNUK 350.7
GTEX-13RTJ-0011-R10b-SM-5O9CW 348.1
GTEX-S7SE-0011-R10A-SM-2XCDF 347.4
GTEX-145MG-0011-R10a-SM-5PNWG 346.3
GTEX-12WSE-0011-R10b-SM-5P9JV 344.1
GTEX-12WSF-0011-R10a-SM-5LZVH 341.1
GTEX-131YS-0011-R10b-SM-5EQ5N 337.0
GTEX-Y8DK-0011-R10A-SM-4SOK1 336.8
GTEX-14ASI-0011-R10b-SM-5S2VZ 326.1
GTEX-NL3H-0011-R10A-SM-2I3E9 325.1
GTEX-13X6J-0011-R10b-SM-5PNWA 324.5
GTEX-YFC4-0011-R10a-SM-4SOK5 322.6
GTEX-13O3Q-0011-R10b-SM-5KM39 321.9
GTEX-13FHO-0011-R10b-SM-5J2MM 319.5
GTEX-WZTO-0011-R10B-SM-4E3KB 318.7
GTEX-Q2AG-0011-R10A-SM-2HMLA 316.1
GTEX-12ZZX-0011-R10b-SM-5DUWK 307.9
GTEX-N7MS-0011-R10A-SM-2HMJK 304.2
GTEX-XLM4-0011-R10A-SM-4AT5P 303.0
GTEX-147GR-0011-R10b-SM-5S2UM 300.7
GTEX-WWYW-0011-R10A-SM-3NB35 299.8
GTEX-13NYS-0011-R10a-SM-5MR4S 297.3
GTEX-13X6K-0011-R10a-SM-5P9JR 296.9
GTEX-12WSM-0011-R10a-SM-5DUWV 295.4
GTEX-132Q8-0011-R10b-SM-5DUWZ 291.3
GTEX-14BIN-0011-R10a-SM-5S2UA 290.2
GTEX-13FXS-0011-R10a-SM-5J2MA 289.6
GTEX-11H98-0011-R10b-SM-5NQ98 288.5
GTEX-QVJO-0011-R10A-SM-2S1QJ 283.8
GTEX-ZUA1-0011-R10a-SM-51MT6 283.2
GTEX-13SLX-0011-R10a-SM-5P9HV 282.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC 280.7
GTEX-QVUS-0011-R10A-SM-3GIK3 277.1
GTEX-131XH-0011-R10a-SM-5EGLJ 273.7
GTEX-YJ89-0011-R10a-SM-4SOK9 273.4
GTEX-13OW7-0011-R10a-SM-5L3H3 273.0
GTEX-13S7M-0011-R10b-SM-5PNZB 272.8
GTEX-QDT8-0011-R10A-SM-32PKG 271.8
GTEX-X4XX-0011-R10B-SM-46MWO 268.0
GTEX-13NYB-0011-R10a-SM-5KM43 267.9
GTEX-TSE9-0011-R10A-SM-3DB7O 266.1
GTEX-14BIL-0011-R10a-SM-5SI75 262.4
GTEX-N7MT-0011-R10A-SM-2I3E1 262.1
GTEX-13FLW-0011-R10b-SM-5LZZF 257.0
GTEX-13OVJ-0011-R10b-SM-5L3HT 255.7
GTEX-13OVL-0011-R10a-SM-5L3GS 254.1
GTEX-13N1W-0011-R10b-SM-5MR4H 253.6
GTEX-13QIC-0011-R10a-SM-5O9C7 252.9
GTEX-ZVZQ-0011-R10b-SM-51MRT 252.6
GTEX-145LS-0011-R10a-SM-5PNUQ 249.2
GTEX-X4EP-0011-R10B-SM-4QASJ 249.0
GTEX-12126-0011-R10b-SM-5BC6T 248.9
GTEX-13CZV-0011-R10b-SM-5LZYD 247.9
GTEX-QMR6-0011-R10A-SM-32PKO 247.9
GTEX-13O3O-0011-R10a-SM-5LUA9 245.6
GTEX-ZF28-0011-R10a-SM-4WWEH 241.1
GTEX-P44H-0011-R10A-SM-2XCEK 240.9
GTEX-ZAB4-0011-R10a-SM-4SOKH 238.1
GTEX-13OW8-0011-R10a-SM-5L3H6 232.5
GTEX-13X6I-0011-R10a-SM-5PNWI 230.3
GTEX-NPJ7-0011-R10A-SM-2I3E5 229.1
GTEX-13N2G-0011-R10a-SM-5MR34 225.8
GTEX-13G51-0011-R10b-SM-5LZYF 222.6
GTEX-13JUV-0011-R10b-SM-5LZXR 221.7
GTEX-13OW6-0011-R10a-SM-5L3HE 217.5
GTEX-12WSH-0011-R10a-SM-5LZUS 215.6
GTEX-Z93S-0011-R10a-SM-4RGNM 208.7
GTEX-11ZUS-0011-R10b-SM-5BC79 208.0
GTEX-12WSD-0011-R10b-SM-5GU79 207.2
GTEX-13QJC-0011-R10a-SM-5SI63 201.4
GTEX-147F4-0011-R10b-SM-5S2WC 200.2
GTEX-ZDXO-0011-R10a-SM-4WWD8 199.7
GTEX-NPJ8-0011-R10A-SM-2YUMO 198.6
GTEX-11WQK-0011-R10a-SM-5BC6R 189.9
GTEX-RVPU-0011-R10A-SM-2XCAH 189.8
GTEX-145LU-0011-R10a-SM-5PNWJ 187.1
GTEX-13FLV-0011-R10b-SM-5LZZ2 184.7
GTEX-OXRN-0011-R10A-SM-2I5GC 180.4
GTEX-ZVT3-0011-R10b-SM-57WB6 180.0
GTEX-1445S-0011-R10a-SM-5PNWB 178.9
GTEX-139TS-0011-R10a-SM-5K7TU 160.9
GTEX-12ZZW-0011-R10b-SM-5HL9X 157.7
GTEX-11WQC-0011-R10a-SM-57WCT 153.6
GTEX-13FTZ-0011-R10b-SM-5KLZS 149.1
GTEX-NL4W-0011-R10A-SM-2I3DY 147.8
GTEX-13SLW-0011-R10a-SM-5S2UI 142.4
GTEX-OXRO-0011-R10A-SM-2I5EH 139.0
GTEX-11GSP-0011-R10a-SM-5NQ7J 136.0
GTEX-ZXG5-0011-R10a-SM-57WDD 133.9
GTEX-ZV68-0011-R10a-SM-51MT7 133.0
GTEX-X261-0011-R10B-SM-4E3JT 130.5
GTEX-14753-0011-R10b-SM-5S2WE 125.4
GTEX-XMD1-0011-R10A-SM-4AT4A 123.7
GTEX-1477Z-0011-R10b-SM-5S2RF 116.9
GTEX-12WSA-0011-R10b-SM-5P9ET 115.6
GTEX-131XW-0011-R10a-SM-5DUVA 115.2
GTEX-13NZA-0011-R10b-SM-5KM54 111.7
GTEX-13JVG-0011-R10b-SM-5KM2P 109.0
GTEX-ZE7O-0011-R10a-SM-57WAZ 94.3
GTEX-13IVO-0011-R10a-SM-5LZY3 79.9
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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