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TISSUE ATLAS PRIMARY DATA ESOPHAGUS

GENE/PROTEIN

Antibody validation


Dictionary

Esophagus

Tissue proteome

Esophagus

ESOPHAGUS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:70.6TPM
GTEx:50.8RPKM
FANTOM5:46.2Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA012388

 

Antibody HPA067448

 

Squamous epithelial cells

Medium   High  
   
   

ESOPHAGUS - HPA RNA-seq

Average TPM

70.6

overview Female, age 70
Sample 1
TPM: 68.9
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38
Sample 2
TPM: 52.9
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76
Sample 3
TPM: 90.0
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

50.8

GTEx sample id

RPKM

30.749.470.11.9122.8020406080100120140
 
30.749.470.11.9122.8020406080100120140

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 50.8
Samples: 286

Max RPKM: 145.4
Min RPKM: 1.9
Std RPKM: 26.5
Median RPKM: 49.4
GTEX-14A6H-1326-SM-5NQBC 145.4
GTEX-RN64-1026-SM-48FDX 122.8
GTEX-U3ZM-0526-SM-4DXTB 111.5
GTEX-13QBU-1026-SM-5LU3R 110.4
GTEX-12ZZY-1426-SM-5N9EI 109.4
GTEX-ZE9C-1126-SM-4WWBD 109.1
GTEX-12696-1326-SM-5FQTJ 108.3
GTEX-R55C-0826-SM-48FCL 106.9
GTEX-131YS-1426-SM-5IJF7 103.4
GTEX-OXRP-0926-SM-48TC1 103.3
GTEX-QEG4-0726-SM-4R1JL 99.4
GTEX-RTLS-1126-SM-46MUQ 99.3
GTEX-OIZH-0626-SM-3NB1L 98.2
GTEX-PVOW-1626-SM-48TC9 98.2
GTEX-WQUQ-1626-SM-4OOSH 98.2
GTEX-PWN1-0626-SM-48TDT 97.1
GTEX-14H4A-1626-SM-5SI69 92.2
GTEX-R55E-1326-SM-48FCR 91.7
GTEX-REY6-1326-SM-48FDO 91.2
GTEX-YB5E-0926-SM-4WWDQ 91.2
GTEX-QVUS-0626-SM-447CC 90.6
GTEX-X4EO-1226-SM-4QARR 87.8
GTEX-PWCY-0726-SM-48TCS 87.0
GTEX-148VJ-1026-SM-5LU98 86.4
GTEX-P4PQ-0626-SM-3NMCU 86.1
GTEX-Y9LG-0626-SM-4WWDH 85.7
GTEX-11P7K-1326-SM-5BC5G 84.8
GTEX-PLZ4-1626-SM-3P618 84.6
GTEX-ZPCL-1426-SM-57WEC 83.8
GTEX-RWS6-0826-SM-47JXF 82.4
GTEX-ZF29-1326-SM-4WWB6 82.1
GTEX-11GSP-1826-SM-5N9DQ 82.0
GTEX-1122O-1726-SM-5GICM 81.8
GTEX-X62O-2226-SM-46MW3 81.6
GTEX-ZQUD-0426-SM-57WFR 81.5
GTEX-13QJ3-1726-SM-5RQK9 81.1
GTEX-X4XY-1726-SM-46MVO 80.9
GTEX-XBEW-1326-SM-4AT63 80.9
GTEX-ZUA1-1226-SM-5NQ6O 80.6
GTEX-XOTO-2126-SM-4B64U 80.5
GTEX-T2IS-0826-SM-4DM6L 80.0
GTEX-T5JC-1726-SM-4DM6U 79.6
GTEX-117YX-1626-SM-5GZZG 78.8
GTEX-13FTX-0526-SM-5IFGS 78.7
GTEX-OIZG-1026-SM-3LK5X 78.7
GTEX-1399Q-1126-SM-5P9JA 78.5
GTEX-N7MT-0326-SM-48TDP 78.4
GTEX-YFC4-1226-SM-5LU9R 77.8
GTEX-XUZC-0426-SM-4BOPE 77.0
GTEX-NFK9-1126-SM-3LK78 76.2
GTEX-UPIC-1026-SM-4IHLT 75.8
GTEX-XQ3S-1126-SM-4BOPK 75.7
GTEX-OIZI-1426-SM-3NB1T 75.0
GTEX-117YW-1926-SM-5H121 74.6
GTEX-ZLV1-0526-SM-4WWD4 74.5
GTEX-14AS3-0626-SM-5QGQD 74.4
GTEX-12ZZX-1326-SM-5DUWI 74.3
GTEX-1399S-1326-SM-5P9GH 73.9
GTEX-OXRN-1726-SM-3NM9B 73.9
GTEX-11DXZ-1226-SM-5H11L 73.7
GTEX-T8EM-0526-SM-4DM64 73.7
GTEX-W5WG-1626-SM-4LMKG 73.6
GTEX-ZYVF-2226-SM-5GIDD 73.5
GTEX-13OVG-0626-SM-5IFEP 73.4
GTEX-XK95-1026-SM-4GIDV 73.1
GTEX-ZG7Y-1126-SM-4WWEZ 72.7
GTEX-ZC5H-1326-SM-5HL7E 71.8
GTEX-11TUW-1326-SM-5EQKV 70.7
GTEX-11ZTS-2626-SM-5EGIC 70.7
GTEX-S95S-0426-SM-4B64I 70.6
GTEX-12BJ1-1626-SM-5HL8Y 70.5
GTEX-13PVR-1826-SM-5Q5CC 70.2
GTEX-11P81-0826-SM-5P9GR 69.8
GTEX-13OW8-2326-SM-5L3I9 69.6
GTEX-TKQ1-0326-SM-4DXSM 69.4
GTEX-YJ89-1526-SM-5P9IR 69.4
GTEX-1399R-0826-SM-5IJEL 69.3
GTEX-XMD2-1326-SM-4YCET 68.9
GTEX-14ICL-0526-SM-5RQJ6 68.6
GTEX-X3Y1-1326-SM-4PQZB 68.5
GTEX-Q2AI-0626-SM-48TZU 68.2
GTEX-11ONC-1526-SM-5GU6S 68.0
GTEX-OXRK-1326-SM-3NB1A 67.8
GTEX-ZZ64-0226-SM-5E44X 67.8
GTEX-R55G-1026-SM-48FDI 67.3
GTEX-U3ZH-1026-SM-4DXUZ 66.8
GTEX-WFG7-1126-SM-4LMK3 66.8
GTEX-XYKS-1526-SM-4BRUP 66.6
GTEX-ZPU1-1426-SM-4WWFU 66.5
GTEX-14BIN-2726-SM-5RQIE 66.2
GTEX-ZVP2-1326-SM-57WCE 65.6
GTEX-S7SF-0926-SM-4AD4M 65.5
GTEX-132QS-1426-SM-5P9GE 65.3
GTEX-147F3-0826-SM-5NQA7 64.8
GTEX-XBED-1026-SM-48TCB 64.8
GTEX-RVPV-0526-SM-47JYL 64.6
GTEX-13OVI-2626-SM-5KM4T 64.5
GTEX-ZTSS-0626-SM-59867 64.5
GTEX-YEC3-2526-SM-4YCDN 64.4
GTEX-11I78-1526-SM-5A5K7 63.6
GTEX-14E1K-1226-SM-5S2PD 63.4
GTEX-O5YV-1026-SM-3LK72 62.0
GTEX-U4B1-0826-SM-4DXTW 62.0
GTEX-145LV-1326-SM-5S2QI 61.6
GTEX-S341-0526-SM-4AD5U 61.2
GTEX-11DXY-1426-SM-5N9CN 60.9
GTEX-PLZ6-0526-SM-3P61C 60.6
GTEX-13NZB-1226-SM-5J2MW 60.1
GTEX-V1D1-1026-SM-4JBHE 60.1
GTEX-Z9EW-0526-SM-5HL8S 59.8
GTEX-RU72-0726-SM-46MUW 59.1
GTEX-P4QT-0626-SM-3NMCP 58.7
GTEX-145MO-1426-SM-5Q5BS 58.6
GTEX-139YR-1726-SM-5IFFK 58.3
GTEX-ZVT2-1326-SM-5E45H 57.4
GTEX-13W3W-1626-SM-5LU35 57.3
GTEX-XQ8I-1526-SM-4BOOH 57.2
GTEX-11XUK-0826-SM-5GU6P 57.1
GTEX-ZYT6-1126-SM-5GZYR 57.0
GTEX-Y3I4-1226-SM-4TT8N 56.7
GTEX-X585-1226-SM-46MW7 56.5
GTEX-13RTK-0526-SM-5S2QF 56.4
GTEX-WH7G-0926-SM-4LVMJ 55.7
GTEX-132AR-2226-SM-5J2NT 55.6
GTEX-12WSK-1126-SM-5LZV8 55.5
GTEX-TML8-1526-SM-4DXUX 55.4
GTEX-131XG-1026-SM-5GCMX 55.1
GTEX-UJMC-0926-SM-4IHLK 53.8
GTEX-111YS-0926-SM-5EGGI 53.6
GTEX-X4LF-0626-SM-4QASB 53.2
GTEX-11EQ9-0726-SM-5A5K2 53.1
GTEX-13S86-0826-SM-5SI6J 52.7
GTEX-12C56-1226-SM-5FQSU 52.6
GTEX-WVLH-1426-SM-4MVNX 52.5
GTEX-11NUK-1326-SM-5P9GN 52.2
GTEX-Y5LM-1026-SM-4VDSQ 52.2
GTEX-QESD-0826-SM-47J4G 52.0
GTEX-13X6K-2126-SM-5O9D4 51.6
GTEX-14DAQ-1426-SM-5RQJD 51.4
GTEX-SUCS-0726-SM-4DM7J 50.0
GTEX-R3RS-1326-SM-48FE7 49.7
GTEX-QCQG-0626-SM-48U21 49.6
GTEX-13G51-0926-SM-5IFFU 49.5
GTEX-R53T-1126-SM-48FD4 49.3
GTEX-Y3IK-1126-SM-51MSV 49.3
GTEX-WRHK-0526-SM-4MVOF 48.7
GTEX-RNOR-1226-SM-48FDQ 47.8
GTEX-ZY6K-0626-SM-59HJL 46.6
GTEX-ZYY3-1526-SM-5SIA9 46.5
GTEX-ZF2S-1226-SM-4WWAX 46.0
GTEX-13D11-1926-SM-5IFGB 45.9
GTEX-Q2AH-0826-SM-48TZN 45.5
GTEX-11EMC-2226-SM-5A5JW 45.2
GTEX-VUSG-1226-SM-4KKZF 45.1
GTEX-S4Q7-0626-SM-4AD5M 45.0
GTEX-11NSD-1126-SM-5N9BQ 44.3
GTEX-Y8E4-1726-SM-5LU9G 44.2
GTEX-12WSD-1826-SM-5GCOA 44.1
GTEX-QV44-1126-SM-4R1KO 43.6
GTEX-UPK5-1226-SM-4IHL8 43.6
GTEX-ZDYS-0826-SM-4WWCR 43.2
GTEX-1211K-0926-SM-5FQTL 42.7
GTEX-139T6-0626-SM-5IFF9 42.4
GTEX-ZTPG-1626-SM-5DUX2 42.2
GTEX-145LT-1126-SM-5LUA1 41.2
GTEX-ZYW4-1326-SM-5E45N 41.2
GTEX-146FH-1726-SM-5QGQ2 40.9
GTEX-S4P3-0426-SM-4AD56 40.8
GTEX-13W46-1926-SM-5J2MF 40.3
GTEX-QLQ7-0926-SM-447BC 40.3
GTEX-Y8LW-0726-SM-5IFI1 40.3
GTEX-13OVJ-1226-SM-5L3HA 39.5
GTEX-T6MO-0526-SM-4DM6R 39.4
GTEX-13O3Q-0826-SM-5IFGF 39.2
GTEX-SE5C-1226-SM-4BRWV 39.0
GTEX-Y5V6-1026-SM-4VBS2 39.0
GTEX-ZT9W-1326-SM-51MTB 39.0
GTEX-1399U-1026-SM-5J1OC 38.5
GTEX-ZYWO-1026-SM-5E45U 38.2
GTEX-U8XE-1726-SM-4E3IF 38.1
GTEX-WEY5-0926-SM-4LMI4 38.1
GTEX-T5JW-1326-SM-4DM5G 37.9
GTEX-WFON-0826-SM-4LVMI 37.9
GTEX-11P82-0526-SM-5986P 37.5
GTEX-QEL4-1426-SM-447AC 37.2
GTEX-RM2N-0726-SM-48FD5 37.2
GTEX-XXEK-0326-SM-4BRVV 37.1
GTEX-QDVJ-0726-SM-48U1W 36.8
GTEX-13FHO-1726-SM-5IFGM 36.7
GTEX-WFG8-1226-SM-4V6EI 36.7
GTEX-131XF-0826-SM-5GICG 36.5
GTEX-14E6E-0726-SM-5S2R3 36.2
GTEX-13O1R-1326-SM-5IJF5 36.1
GTEX-YF7O-0926-SM-5IFIF 36.1
GTEX-WK11-1026-SM-4OOS8 35.7
GTEX-Y111-1626-SM-57WCY 35.7
GTEX-12WSA-1426-SM-5EGJU 35.6
GTEX-12KS4-0926-SM-5BC5S 35.3
GTEX-ZF3C-1626-SM-4WWB4 35.1
GTEX-13FH7-0526-SM-5IJF8 34.9
GTEX-13O21-0626-SM-5IJDI 34.7
GTEX-QEG5-1426-SM-447AS 34.5
GTEX-XMK1-1326-SM-4B65Q 34.5
GTEX-QDVN-1026-SM-48TZA 34.2
GTEX-OOBK-0625-SM-3LK5P 34.1
GTEX-SNOS-0626-SM-4DM5F 34.1
GTEX-12WSL-1526-SM-5GCP8 33.8
GTEX-RU1J-0326-SM-46MUM 33.8
GTEX-11TT1-0526-SM-5P9JO 32.5
GTEX-VJYA-0726-SM-4KL1T 32.4
GTEX-Y5V5-1626-SM-4VDSG 32.3
GTEX-Y114-0926-SM-4TT7J 32.2
GTEX-ZYFG-1126-SM-5GICY 31.4
GTEX-13FLV-1126-SM-5J2NO 31.1
GTEX-14BMU-0926-SM-5S2QB 30.6
GTEX-XGQ4-1526-SM-4AT6H 30.2
GTEX-ZTX8-0226-SM-5E44D 30.1
GTEX-111CU-0726-SM-5GZYD 29.5
GTEX-ZGAY-1126-SM-4WWBS 29.5
GTEX-1497J-2726-SM-5SI9W 29.4
GTEX-S32W-0926-SM-4AD5X 29.3
GTEX-139UW-1126-SM-5IJEJ 28.2
GTEX-11ZU8-1526-SM-5EGHX 28.0
GTEX-1212Z-2126-SM-5FQTM 27.1
GTEX-13U4I-1126-SM-5LU3S 26.9
GTEX-13111-0826-SM-5LZV3 26.8
GTEX-11LCK-1726-SM-5S2OQ 26.3
GTEX-133LE-0626-SM-5IFFJ 26.1
GTEX-NPJ8-1926-SM-3MJGB 25.5
GTEX-XUJ4-1026-SM-4BOPB 25.5
GTEX-R45C-1226-SM-48FEE 24.6
GTEX-TSE9-1226-SM-4DXTM 24.5
GTEX-145LS-1826-SM-5LUAZ 24.4
GTEX-U3ZN-1726-SM-4DXUQ 23.9
GTEX-131XE-1426-SM-5HL7V 23.7
GTEX-P4PP-0626-SM-3NM9X 23.6
GTEX-V955-1126-SM-4JBH3 23.6
GTEX-P4QS-0626-SM-3NMD1 23.0
GTEX-13FTW-1626-SM-5KM4N 22.4
GTEX-144GM-1426-SM-5LU31 22.3
GTEX-X15G-0826-SM-4PQZD 22.3
GTEX-11DYG-1326-SM-5N9DO 22.0
GTEX-14C38-2126-SM-5RQJO 21.1
GTEX-SNMC-0526-SM-4DM69 21.0
GTEX-WFJO-0826-SM-4LVM5 21.0
GTEX-P78B-1026-SM-3NMC4 20.6
GTEX-S3XE-0926-SM-4AD4S 20.6
GTEX-YECK-1626-SM-5IFHQ 20.3
GTEX-UJHI-0826-SM-4IHLM 19.8
GTEX-PSDG-1326-SM-48TD2 19.6
GTEX-146FQ-1026-SM-5LU8I 19.4
GTEX-139TU-1226-SM-5J2NL 19.3
GTEX-ZVE2-1326-SM-5NQ94 19.3
GTEX-S33H-0826-SM-4AD5Y 19.1
GTEX-ZAB4-1126-SM-5HL86 19.1
GTEX-11DXX-1126-SM-5GZZK 18.6
GTEX-11VI4-0526-SM-5EQ48 18.3
GTEX-PLZ5-0926-SM-3TW8L 18.3
GTEX-OXRL-0626-SM-3NM9C 17.6
GTEX-ZA64-0626-SM-5HL9O 17.5
GTEX-11EM3-0826-SM-5N9CC 17.4
GTEX-144GN-0626-SM-5O9B2 17.4
GTEX-WOFM-0626-SM-4OOS3 15.9
GTEX-QLQW-0526-SM-4R1KS 14.9
GTEX-ZXES-1126-SM-5GZXN 13.5
GTEX-XLM4-2326-SM-4TT2D 13.0
GTEX-146FR-0426-SM-5SI97 12.9
GTEX-145MN-1026-SM-5NQ9G 11.9
GTEX-13X6I-1026-SM-5LU4C 11.7
GTEX-144FL-2726-SM-5O98Z 11.6
GTEX-13CF3-1626-SM-5IFG9 11.2
GTEX-13PVQ-1726-SM-5IFF3 9.9
GTEX-132Q8-1826-SM-5EGIY 9.0
GTEX-11DZ1-2026-SM-5A5KG 8.8
GTEX-ZZPT-1426-SM-5N9C5 8.6
GTEX-TMMY-1126-SM-4DXSX 8.4
GTEX-ZAB5-0926-SM-5CVMV 7.3
GTEX-145MF-1426-SM-5O9B6 6.4
GTEX-145ME-0526-SM-5QGQV 5.6
GTEX-12ZZW-1726-SM-5DUVD 5.5
GTEX-13X6H-1326-SM-5LU42 5.5
GTEX-XV7Q-1126-SM-4BRVS 5.4
GTEX-ZT9X-0526-SM-5GCOP 5.4
GTEX-144GO-2726-SM-5O9A2 4.1
GTEX-R55D-1126-SM-48FEB 2.8
GTEX-RUSQ-0826-SM-47JWW 1.9
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

46.2

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 46.2
FF:10015-101C6 68,74,75 years, mixed 46.2

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