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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:621.3TPM
GTEx:109.2RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Not detected
Neuronal cells:Low
Neuropil:Not detected
 

Antibody staining

Antibody HPA050924

 

Antibody HPA053568

 

Endothelial cells

Low   Not detected  

Glial cells

Not detected   Low  

Neuronal cells

Low   Medium  

Neuropil

Not detected   Low  
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

621.3

N/A Male, age 5
Sample 1
TPM: 683.2
overview Female, age 40
Sample 2
TPM: 370.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 810.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

109.2

GTEx sample id

RPKM

81.8108.3136.141.9217.0020406080100120140160180200
 
81.8108.3136.141.9217.0020406080100120140160180200

Brain - Cortex

Brain - Cortex
RPKM: 108.1
Samples: 114

Max RPKM: 217
Min RPKM: 41.9
Std RPKM: 33.7
Median RPKM: 108.2
GTEX-X585-3026-SM-46MWF 217.0
GTEX-T5JC-2426-SM-3NMDB 180.2
GTEX-WVLH-3026-SM-3MJG9 164.4
GTEX-WHSE-3026-SM-3P5ZH 163.9
GTEX-14BMV-3026-SM-5S2PQ 163.5
GTEX-WWYW-3126-SM-3NB39 163.2
GTEX-WL46-2926-SM-3LK82 155.4
GTEX-R55F-1326-SM-5S2V4 153.4
GTEX-12WSC-3026-SM-5GCNF 152.3
GTEX-12126-1026-SM-5P9JJ 150.6
GTEX-11ZUS-2926-SM-5FQSL 150.1
GTEX-13NYC-2826-SM-5K7WR 149.9
GTEX-ZYFD-3026-SM-5E44C 149.6
GTEX-145MH-3026-SM-5Q5DZ 148.7
GTEX-13VXU-2926-SM-5LU5C 147.2
GTEX-11DXY-3226-SM-5GIDE 145.7
GTEX-T2IS-3026-SM-32QPM 143.8
GTEX-12ZZX-2926-SM-5GCOQ 143.6
GTEX-13FXS-3126-SM-5J2NN 143.1
GTEX-1313W-3126-SM-5LZUI 143.0
GTEX-WZTO-2926-SM-3NM9I 142.6
GTEX-11OC5-0726-SM-5P9JK 142.5
GTEX-117XS-3026-SM-5N9CA 140.8
GTEX-13O3Q-2926-SM-5KM45 139.7
GTEX-T6MN-2626-SM-32PMQ 139.5
GTEX-13FLW-1426-SM-5K7YE 139.0
GTEX-11GSO-2926-SM-5HL73 137.3
GTEX-YFC4-3126-SM-5PNV6 137.1
GTEX-ZUA1-3026-SM-59HJC 136.3
GTEX-13SLX-3126-SM-5S2Q5 135.4
GTEX-12ZZY-3026-SM-5GCOU 134.6
GTEX-Z93S-2926-SM-57WB9 133.3
GTEX-11NUK-2926-SM-5A5MD 131.5
GTEX-13OW6-3026-SM-5J2MI 128.1
GTEX-13OVH-3026-SM-5MR4N 125.8
GTEX-ZAK1-3026-SM-5S2MJ 123.4
GTEX-PVOW-2526-SM-2XCF7 123.1
GTEX-X4XX-3026-SM-3NMB2 123.0
GTEX-11PRG-2926-SM-5987A 122.8
GTEX-QVJO-1426-SM-2S1QY 122.8
GTEX-131YS-3126-SM-5KLYT 122.7
GTEX-13FHP-3026-SM-5IJBS 122.2
GTEX-145MF-2726-SM-5O995 121.8
GTEX-14ASI-3026-SM-5S2PN 121.3
GTEX-RNOR-2326-SM-2TF4I 120.0
GTEX-XOTO-3026-SM-4B65M 119.5
GTEX-YJ89-3026-SM-5IFJI 119.1
GTEX-Q2AG-2926-SM-2HMJ3 118.2
GTEX-144GL-3026-SM-5Q5CW 116.6
GTEX-13FHO-3026-SM-5J1O9 115.8
GTEX-13NYB-3026-SM-5IJD7 115.7
GTEX-Y111-2726-SM-4TT3N 115.5
GTEX-11DXW-1126-SM-5H12Q 113.2
GTEX-145MG-3026-SM-5RQJA 113.0
GTEX-11ONC-2926-SM-5P9JM 111.9
GTEX-1192X-3126-SM-5N9BY 110.1
GTEX-Y8DK-0826-SM-4TT3T 109.4
GTEX-13NYS-3126-SM-5KLYV 107.1
GTEX-145LS-3126-SM-5Q5BY 106.7
GTEX-14A5I-2926-SM-5Q5CQ 105.3
GTEX-1128S-2726-SM-5H12C 103.0
GTEX-12ZZW-2926-SM-5LZUP 102.9
GTEX-NPJ8-1526-SM-2D7VU 102.9
GTEX-13JUV-2926-SM-5LZX7 102.7
GTEX-13OW8-2826-SM-5L3GC 101.9
GTEX-111FC-3126-SM-5GZZ2 101.5
GTEX-13X6J-3026-SM-5Q5CU 100.5
GTEX-132Q8-3026-SM-5PNVG 99.2
GTEX-XLM4-3026-SM-4AT6L 98.8
GTEX-1399T-3026-SM-5KLZC 98.1
GTEX-13O3O-3126-SM-5KM3H 97.2
GTEX-TSE9-3026-SM-3DB76 94.7
GTEX-144FL-3026-SM-5O99C 92.9
GTEX-QMR6-1426-SM-32PLA 92.3
GTEX-11GS4-3126-SM-5A5LH 91.4
GTEX-ZVT3-3026-SM-5E43N 90.1
GTEX-RU72-3026-SM-5SI7Y 89.7
GTEX-QDT8-2926-SM-32PKC 87.5
GTEX-12ZZZ-3026-SM-5BC67 86.7
GTEX-12WSH-3026-SM-5CVNI 86.6
GTEX-13PL6-3126-SM-5LUAR 84.4
GTEX-11OF3-2926-SM-5HL78 84.0
GTEX-UTHO-3026-SM-3GAFB 83.7
GTEX-13OVJ-2826-SM-5L3GW 82.6
GTEX-QVUS-2826-SM-3GADB 82.4
GTEX-13QIC-2926-SM-5J2NF 81.6
GTEX-ZE7O-3126-SM-5HL5X 80.4
GTEX-11NV4-2126-SM-5N9DS 79.2
GTEX-11WQK-3026-SM-5EQL6 78.2
GTEX-11EI6-3026-SM-5GZZO 77.5
GTEX-131XW-3126-SM-5LZUC 77.5
GTEX-139T8-1026-SM-5J2MC 77.4
GTEX-OXRN-2426-SM-2I5EQ 75.5
GTEX-11EMC-3226-SM-5EGKW 73.9
GTEX-13X6K-2926-SM-5Q5D5 72.5
GTEX-ZAJG-3126-SM-5HL9J 72.2
GTEX-13JVG-3126-SM-5L3FH 70.1
GTEX-13S7M-3126-SM-5RQJQ 69.0
GTEX-13PVQ-3026-SM-5SI93 66.2
GTEX-12WSD-3126-SM-5HL7P 65.9
GTEX-NPJ7-2726-SM-2I3FT 65.6
GTEX-147GR-3026-SM-5S2ML 64.7
GTEX-1117F-3226-SM-5N9CT 59.6
GTEX-13G51-3026-SM-5IJB8 59.4
GTEX-11TTK-2926-SM-5PNYP 58.9
GTEX-13OW7-3026-SM-5L3GY 58.3
GTEX-ZZPT-3026-SM-5GZXH 57.9
GTEX-13IVO-2926-SM-5L3CZ 57.8
GTEX-11GSP-3226-SM-5986O 54.9
GTEX-11O72-2926-SM-5BC4V 53.9
GTEX-N7MT-1126-SM-5SI7V 51.9
GTEX-1445S-3026-SM-5O9BR 48.3
GTEX-PWO3-0926-SM-2I5EY 46.2
GTEX-12WSA-2926-SM-5EQ4D 41.9
Show all
78.2111.3141.731.5233.0020406080100120140160180200220
 
78.2111.3141.731.5233.0020406080100120140160180200220

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 110.3
Samples: 108

Max RPKM: 233
Min RPKM: 31.5
Std RPKM: 41.5
Median RPKM: 111.3
GTEX-X585-0011-R10A-SM-46MUY 233.0
GTEX-T5JC-0011-R10A-SM-32PM2 202.3
GTEX-145MG-0011-R10a-SM-5PNWG 184.3
GTEX-12ZZY-0011-R10b-SM-5HL7W 184.0
GTEX-12WSE-0011-R10b-SM-5P9JV 183.5
GTEX-1313W-0011-R10b-SM-5DUXA 183.3
GTEX-145MH-0011-R10b-SM-5PNUK 172.7
GTEX-WL46-0011-R10A-SM-3MJFQ 169.7
GTEX-12WSC-0011-R10a-SM-5GU57 165.9
GTEX-13O3Q-0011-R10b-SM-5KM39 163.3
GTEX-13X6J-0011-R10b-SM-5PNWA 162.2
GTEX-131YS-0011-R10b-SM-5EQ5N 162.0
GTEX-14ASI-0011-R10b-SM-5S2VZ 160.2
GTEX-T6MN-0011-R10A-SM-32QP7 158.1
GTEX-12ZZX-0011-R10b-SM-5DUWK 157.7
GTEX-WZTO-0011-R10B-SM-4E3KB 156.8
GTEX-Y8DK-0011-R10A-SM-4SOK1 156.7
GTEX-WVLH-0011-R10A-SM-3MJFM 156.3
GTEX-131XH-0011-R10a-SM-5EGLJ 156.0
GTEX-NL3H-0011-R10A-SM-2I3E9 153.2
GTEX-12WSM-0011-R10a-SM-5DUWV 148.4
GTEX-WWYW-0011-R10A-SM-3NB35 147.4
GTEX-Q2AG-0011-R10A-SM-2HMLA 147.0
GTEX-13RTJ-0011-R10b-SM-5O9CW 146.7
GTEX-14BIN-0011-R10a-SM-5S2UA 144.1
GTEX-YFC4-0011-R10a-SM-4SOK5 143.6
GTEX-13X6K-0011-R10a-SM-5P9JR 141.9
GTEX-12WSF-0011-R10a-SM-5LZVH 141.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC 140.9
GTEX-147GR-0011-R10b-SM-5S2UM 139.5
GTEX-13NYS-0011-R10a-SM-5MR4S 137.3
GTEX-13FXS-0011-R10a-SM-5J2MA 130.8
GTEX-13S7M-0011-R10b-SM-5PNZB 130.1
GTEX-S7SE-0011-R10A-SM-2XCDF 129.6
GTEX-N7MS-0011-R10A-SM-2HMJK 128.9
GTEX-YJ89-0011-R10a-SM-4SOK9 128.2
GTEX-11H98-0011-R10b-SM-5NQ98 127.8
GTEX-ZUA1-0011-R10a-SM-51MT6 127.2
GTEX-Z93S-0011-R10a-SM-4RGNM 126.9
GTEX-13FLW-0011-R10b-SM-5LZZF 125.3
GTEX-13FHO-0011-R10b-SM-5J2MM 125.0
GTEX-13NYB-0011-R10a-SM-5KM43 124.5
GTEX-ZVZQ-0011-R10b-SM-51MRT 123.8
GTEX-13OVL-0011-R10a-SM-5L3GS 121.3
GTEX-13OW7-0011-R10a-SM-5L3H3 118.2
GTEX-13QIC-0011-R10a-SM-5O9C7 117.2
GTEX-X4XX-0011-R10B-SM-46MWO 117.1
GTEX-14BIL-0011-R10a-SM-5SI75 116.9
GTEX-XLM4-0011-R10A-SM-4AT5P 116.6
GTEX-ZF28-0011-R10a-SM-4WWEH 113.0
GTEX-13SLX-0011-R10a-SM-5P9HV 112.3
GTEX-12126-0011-R10b-SM-5BC6T 111.8
GTEX-132Q8-0011-R10b-SM-5DUWZ 111.4
GTEX-13JUV-0011-R10b-SM-5LZXR 111.4
GTEX-145LS-0011-R10a-SM-5PNUQ 111.2
GTEX-13N1W-0011-R10b-SM-5MR4H 110.3
GTEX-13N2G-0011-R10a-SM-5MR34 109.4
GTEX-13QJC-0011-R10a-SM-5SI63 109.1
GTEX-X4EP-0011-R10B-SM-4QASJ 108.3
GTEX-13OW6-0011-R10a-SM-5L3HE 107.8
GTEX-13X6I-0011-R10a-SM-5PNWI 106.9
GTEX-QVJO-0011-R10A-SM-2S1QJ 106.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 104.0
GTEX-13CZV-0011-R10b-SM-5LZYD 100.6
GTEX-13O3O-0011-R10a-SM-5LUA9 98.0
GTEX-QMR6-0011-R10A-SM-32PKO 96.2
GTEX-12WSH-0011-R10a-SM-5LZUS 95.5
GTEX-13G51-0011-R10b-SM-5LZYF 93.6
GTEX-NL4W-0011-R10A-SM-2I3DY 88.9
GTEX-11ZUS-0011-R10b-SM-5BC79 88.7
GTEX-N7MT-0011-R10A-SM-2I3E1 87.7
GTEX-147F4-0011-R10b-SM-5S2WC 86.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 86.3
GTEX-NPJ7-0011-R10A-SM-2I3E5 85.6
GTEX-ZDXO-0011-R10a-SM-4WWD8 84.5
GTEX-12WSD-0011-R10b-SM-5GU79 84.4
GTEX-13OVJ-0011-R10b-SM-5L3HT 80.2
GTEX-QVUS-0011-R10A-SM-3GIK3 80.1
GTEX-12ZZW-0011-R10b-SM-5HL9X 78.9
GTEX-145LU-0011-R10a-SM-5PNWJ 78.7
GTEX-ZVT3-0011-R10b-SM-57WB6 78.5
GTEX-139TS-0011-R10a-SM-5K7TU 77.4
GTEX-13OW8-0011-R10a-SM-5L3H6 76.8
GTEX-QDT8-0011-R10A-SM-32PKG 76.8
GTEX-ZXG5-0011-R10a-SM-57WDD 73.6
GTEX-TSE9-0011-R10A-SM-3DB7O 73.5
GTEX-P44H-0011-R10A-SM-2XCEK 72.1
GTEX-11WQK-0011-R10a-SM-5BC6R 71.3
GTEX-13FLV-0011-R10b-SM-5LZZ2 71.1
GTEX-13SLW-0011-R10a-SM-5S2UI 65.2
GTEX-X261-0011-R10B-SM-4E3JT 65.0
GTEX-OXRN-0011-R10A-SM-2I5GC 64.8
GTEX-11WQC-0011-R10a-SM-57WCT 63.8
GTEX-ZV68-0011-R10a-SM-51MT7 62.4
GTEX-13FTZ-0011-R10b-SM-5KLZS 57.5
GTEX-1445S-0011-R10a-SM-5PNWB 57.4
GTEX-RVPU-0011-R10A-SM-2XCAH 56.0
GTEX-1477Z-0011-R10b-SM-5S2RF 52.1
GTEX-13JVG-0011-R10b-SM-5KM2P 51.0
GTEX-12WSA-0011-R10b-SM-5P9ET 50.7
GTEX-13NZA-0011-R10b-SM-5KM54 46.9
GTEX-14753-0011-R10b-SM-5S2WE 45.7
GTEX-11GSP-0011-R10a-SM-5NQ7J 44.5
GTEX-XMD1-0011-R10A-SM-4AT4A 43.5
GTEX-ZE7O-0011-R10a-SM-57WAZ 42.9
GTEX-13IVO-0011-R10a-SM-5LZY3 39.7
GTEX-131XW-0011-R10a-SM-5DUVA 33.8
GTEX-OXRO-0011-R10A-SM-2I5EH 31.5
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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