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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:249.8RPKM
FANTOM5:584.9Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Medium
 

Antibody staining

Antibody HPA019007

 

Antibody CAB004641

 

Glial cells

Low   Medium  

Neuronal cells

Medium   Medium  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

249.8

GTEx sample id

RPKM

212.7246.1277.7130.5371.2050100150200250300350400
 
212.7246.1277.7130.5371.2050100150200250300350400

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 249.8
Samples: 117

Max RPKM: 415.8
Min RPKM: 130.5
Std RPKM: 50.6
Median RPKM: 246.1
GTEX-12WSA-0011-R5b-SM-5GU5I 415.8
GTEX-139TT-0011-R5b-SM-5K7W8 395.2
GTEX-T2IS-0011-R5A-SM-32QP4 389.9
GTEX-T6MN-0011-R5A-SM-32QPD 371.2
GTEX-P44H-0011-R5A-SM-2XCEX 349.7
GTEX-12WSB-0011-R5b-SM-5GU67 339.0
GTEX-13X6K-0011-R5b-SM-5PNUE 335.8
GTEX-11H98-0011-R5b-SM-57WCF 331.8
GTEX-ZUA1-0011-R5b-SM-51MTG 325.5
GTEX-13FLV-0011-R5a-SM-5LZWT 325.3
GTEX-QVJO-0011-R5A-SM-2S1QM 323.1
GTEX-144GO-0011-R5a-SM-5PNUR 308.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 308.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 301.9
GTEX-131YS-0011-R5b-SM-5K7YB 301.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 299.9
GTEX-13NYS-0011-R5a-SM-5MR4D 296.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 291.2
GTEX-12WSC-0011-R5b-SM-5CVNS 289.0
GTEX-RU72-0011-R5A-SM-2TF6U 288.8
GTEX-13CZV-0011-R5a-SM-5K7XA 284.9
GTEX-WVLH-0011-R5A-SM-3MJFW 283.3
GTEX-X261-0011-R5A-SM-3NMB4 283.0
GTEX-N7MT-0011-R5a-SM-2I3G6 280.4
GTEX-UTHO-0011-R5A-SM-3GIJD 279.8
GTEX-PVOW-0011-R5A-SM-32PL7 279.2
GTEX-TSE9-0011-R5A-SM-3DB7J 279.1
GTEX-1399T-0011-R5b-SM-5IJDK 278.2
GTEX-NPJ7-0011-R5a-SM-33HBK 278.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 277.7
GTEX-13CIG-0011-R5b-SM-5L3F2 276.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 276.0
GTEX-ZV68-0011-R5a-SM-4YCDW 274.5
GTEX-13NYB-0011-R5a-SM-5MR45 273.4
GTEX-13G51-0011-R5a-SM-5L3EB 272.9
GTEX-T5JC-0011-R5A-SM-32PLK 272.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 272.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 271.2
GTEX-S7SE-0011-R5A-SM-2XCDA 269.8
GTEX-1445S-0011-R5a-SM-5PNUS 268.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 266.9
GTEX-R55E-0011-R5A-SM-2TC5N 265.9
GTEX-N7MS-0011-R5a-SM-2HMK8 264.3
GTEX-1313W-0011-R5b-SM-5L3EP 261.6
GTEX-NL3H-0011-R5a-SM-2I3GB 261.6
GTEX-XMD1-0011-R5A-SM-4AT47 261.4
GTEX-11OF3-0011-R5a-SM-57WB4 260.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 260.0
GTEX-WZTO-0011-R5B-SM-3NMC5 259.3
GTEX-14BIM-0011-R5b-SM-5S2RM 259.1
GTEX-QMR6-0011-R5A-SM-32PKT 258.0
GTEX-132Q8-0011-R5a-SM-5IJDM 255.9
GTEX-139T8-0011-R5b-SM-5J1MO 254.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 254.2
GTEX-ZE7O-0011-R5a-SM-57WBO 252.4
GTEX-12ZZX-0011-R5a-SM-5HL89 251.2
GTEX-11WQC-0011-R5a-SM-5BC74 248.6
GTEX-13OW6-0011-R5a-SM-5O9BK 248.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 246.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 245.9
GTEX-13JUV-0011-R5a-SM-5LZY5 245.8
GTEX-WWYW-0011-R5A-SM-3NB3E 245.6
GTEX-13JVG-0011-R5a-SM-5MR4O 244.6
GTEX-13X6J-0011-R5b-SM-5PNWT 243.6
GTEX-OXRN-0011-R5A-SM-2I5EF 243.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 242.5
GTEX-11GSP-0011-R5a-SM-57WBE 236.9
GTEX-ZXG5-0011-R5b-SM-57WBN 236.9
GTEX-WHSE-0011-R5A-SM-3P5ZO 236.8
GTEX-13OW5-0011-R5b-SM-5L3FR 235.8
GTEX-13X6I-0011-R5a-SM-5PNWW 235.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 234.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 234.5
GTEX-13OW7-0011-R5b-SM-5O9DM 234.1
GTEX-12WSD-0011-R5b-SM-5CVNG 233.5
GTEX-13OVL-0011-R5b-SM-5L3FU 233.5
GTEX-YFC4-0011-R5a-SM-4RGLR 228.9
GTEX-NL4W-0011-R5a-SM-2I3GD 228.3
GTEX-13FLW-0011-R5a-SM-5LZX6 228.1
GTEX-13O3O-0011-R5b-SM-5KM44 225.4
GTEX-13OVH-0011-R5b-SM-5KM4L 220.7
GTEX-13VXU-0011-R5a-SM-5O9D7 220.2
GTEX-11NV4-0011-R5a-SM-5NQ88 219.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 219.6
GTEX-XOTO-0011-R5A-SM-4B657 217.9
GTEX-13SLX-0011-R5a-SM-5O9BV 215.8
GTEX-ZVT3-0011-R5a-SM-51MSI 215.8
GTEX-14ABY-0011-R5b-SM-5SI7B 212.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 212.5
GTEX-12WSF-0011-R5a-SM-5HL8K 211.8
GTEX-144GL-0011-R5b-SM-5PNUJ 211.6
GTEX-145MH-0011-R5a-SM-5P9JT 209.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 209.4
GTEX-X4XX-0011-R5A-SM-46MWN 209.2
GTEX-RVPU-0011-R5A-SM-2XCAD 208.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 208.5
GTEX-13112-0011-R5b-SM-5DUV8 206.7
GTEX-X585-0011-R5A-SM-46MVI 205.8
GTEX-13FXS-0011-R5b-SM-5LZYE 202.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 202.4
GTEX-OHPN-0011-R5A-SM-2I5FF 201.9
GTEX-139TS-0011-R5b-SM-5J2MZ 194.6
GTEX-12WSH-0011-R5b-SM-5P9F3 192.2
GTEX-RVPV-0011-R5A-SM-2TF69 188.3
GTEX-13CF2-0011-R5a-SM-5LZWS 187.8
GTEX-145LS-0011-R5a-SM-5SI65 186.7
GTEX-11UD1-0011-R5b-SM-5P9FP 186.6
GTEX-14BIN-0011-R5b-SM-5SI78 185.7
GTEX-S7PM-0011-R5A-SM-3NM8G 184.2
GTEX-WL46-0011-R5A-SM-3LK6V 179.8
GTEX-13S7M-0011-R5b-SM-5P9HS 178.7
GTEX-145MG-0011-R5b-SM-5S2VU 171.3
GTEX-Z93S-0011-R5b-SM-4RGNI 168.5
GTEX-YJ89-0011-R5a-SM-4V6GM 163.5
GTEX-1477Z-0011-R5b-SM-5PNUO 161.2
GTEX-13FHP-0011-R5b-SM-5LZY2 139.8
GTEX-13NZA-0011-R5b-SM-5KM4K 130.5
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

584.9

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 584.9
FF:10379-105H1 89 years, female 586.8
FF:10164-103B2 76 years, female 583.1

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