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SERINC1
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:145.2RPKM
FANTOM5:481.4Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA035738

 

Antibody HPA035739

 

Glial cells

Low   Low  

Neuronal cells

High   Not detected  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

145.2

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 145.2
Samples: 117

Max RPKM: 330.9
Min RPKM: 51.1
Std RPKM: 45.8
Median RPKM: 141.2
GTEX-T2IS-0011-R5A-SM-32QP4 330.9
GTEX-PVOW-0011-R5A-SM-32PL7 284.3
GTEX-QMR6-0011-R5A-SM-32PKT 245.5
GTEX-P44H-0011-R5A-SM-2XCEX 238.9
GTEX-QVJO-0011-R5A-SM-2S1QM 234.6
GTEX-131YS-0011-R5b-SM-5K7YB 230.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 228.7
GTEX-UTHO-0011-R5A-SM-3GIJD 220.5
GTEX-12WSA-0011-R5b-SM-5GU5I 213.7
GTEX-T6MN-0011-R5A-SM-32QPD 209.4
GTEX-WL46-0011-R5A-SM-3LK6V 198.9
GTEX-12WSB-0011-R5b-SM-5GU67 197.5
GTEX-N7MS-0011-R5a-SM-2HMK8 197.0
GTEX-WVLH-0011-R5A-SM-3MJFW 196.4
GTEX-139TT-0011-R5b-SM-5K7W8 193.8
GTEX-WZTO-0011-R5B-SM-3NMC5 190.5
GTEX-X585-0011-R5A-SM-46MVI 190.4
GTEX-11H98-0011-R5b-SM-57WCF 186.1
GTEX-1313W-0011-R5b-SM-5L3EP 184.5
GTEX-13G51-0011-R5a-SM-5L3EB 183.6
GTEX-WWYW-0011-R5A-SM-3NB3E 183.4
GTEX-S7SE-0011-R5A-SM-2XCDA 182.6
GTEX-13X6I-0011-R5a-SM-5PNWW 180.7
GTEX-1399T-0011-R5b-SM-5IJDK 179.9
GTEX-145LS-0011-R5a-SM-5SI65 178.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 172.4
GTEX-12WSC-0011-R5b-SM-5CVNS 172.3
GTEX-R55E-0011-R5A-SM-2TC5N 170.5
GTEX-Z93S-0011-R5b-SM-4RGNI 169.6
GTEX-14ABY-0011-R5b-SM-5SI7B 168.6
GTEX-14BIM-0011-R5b-SM-5S2RM 168.5
GTEX-N7MT-0011-R5a-SM-2I3G6 165.1
GTEX-T5JC-0011-R5A-SM-32PLK 164.8
GTEX-13X6J-0011-R5b-SM-5PNWT 163.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 162.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 162.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 161.8
GTEX-12WSF-0011-R5a-SM-5HL8K 161.0
GTEX-WHSE-0011-R5A-SM-3P5ZO 161.0
GTEX-13O3O-0011-R5b-SM-5KM44 159.3
GTEX-145MH-0011-R5a-SM-5P9JT 158.9
GTEX-11NV4-0011-R5a-SM-5NQ88 158.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 157.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 157.1
GTEX-ZUA1-0011-R5b-SM-51MTG 156.8
GTEX-11OF3-0011-R5a-SM-57WB4 156.0
GTEX-11GSP-0011-R5a-SM-57WBE 154.9
GTEX-132Q8-0011-R5a-SM-5IJDM 154.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 153.8
GTEX-13JUV-0011-R5a-SM-5LZY5 150.3
GTEX-X4XX-0011-R5A-SM-46MWN 149.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 149.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 147.7
GTEX-13OW6-0011-R5a-SM-5O9BK 147.0
GTEX-RU72-0011-R5A-SM-2TF6U 147.0
GTEX-13VXU-0011-R5a-SM-5O9D7 144.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 143.8
GTEX-XMD1-0011-R5A-SM-4AT47 142.7
GTEX-13OVL-0011-R5b-SM-5L3FU 141.2
GTEX-13FXS-0011-R5b-SM-5LZYE 139.1
GTEX-12WSD-0011-R5b-SM-5CVNG 138.7
GTEX-OHPN-0011-R5A-SM-2I5FF 138.5
GTEX-11WQC-0011-R5a-SM-5BC74 137.5
GTEX-YFC4-0011-R5a-SM-4RGLR 136.3
GTEX-13FLW-0011-R5a-SM-5LZX6 135.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 135.5
GTEX-13SLX-0011-R5a-SM-5O9BV 135.2
GTEX-NPJ7-0011-R5a-SM-33HBK 135.1
GTEX-13CZV-0011-R5a-SM-5K7XA 134.6
GTEX-13X6K-0011-R5b-SM-5PNUE 134.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 130.3
GTEX-13FLV-0011-R5a-SM-5LZWT 130.0
GTEX-RVPV-0011-R5A-SM-2TF69 129.4
GTEX-13OW7-0011-R5b-SM-5O9DM 128.8
GTEX-ZE7O-0011-R5a-SM-57WBO 128.6
GTEX-ZXG5-0011-R5b-SM-57WBN 128.5
GTEX-13NYB-0011-R5a-SM-5MR45 128.0
GTEX-RVPU-0011-R5A-SM-2XCAD 123.8
GTEX-13NYS-0011-R5a-SM-5MR4D 123.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 122.5
GTEX-144GO-0011-R5a-SM-5PNUR 120.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 120.2
GTEX-13S7M-0011-R5b-SM-5P9HS 118.9
GTEX-NL4W-0011-R5a-SM-2I3GD 117.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 117.8
GTEX-1445S-0011-R5a-SM-5PNUS 114.5
GTEX-13OW5-0011-R5b-SM-5L3FR 113.3
GTEX-NL3H-0011-R5a-SM-2I3GB 113.3
GTEX-14BIN-0011-R5b-SM-5SI78 113.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 110.7
GTEX-12ZZX-0011-R5a-SM-5HL89 109.0
GTEX-XOTO-0011-R5A-SM-4B657 106.7
GTEX-13JVG-0011-R5a-SM-5MR4O 106.0
GTEX-13OVH-0011-R5b-SM-5KM4L 105.7
GTEX-13FHP-0011-R5b-SM-5LZY2 104.9
GTEX-X261-0011-R5A-SM-3NMB4 104.9
GTEX-ZVT3-0011-R5a-SM-51MSI 102.3
GTEX-TSE9-0011-R5A-SM-3DB7J 101.4
GTEX-OXRN-0011-R5A-SM-2I5EF 99.4
GTEX-YJ89-0011-R5a-SM-4V6GM 98.9
GTEX-11UD1-0011-R5b-SM-5P9FP 97.3
GTEX-144GL-0011-R5b-SM-5PNUJ 96.3
GTEX-13112-0011-R5b-SM-5DUV8 95.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 92.8
GTEX-139TS-0011-R5b-SM-5J2MZ 92.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 89.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 89.0
GTEX-13CIG-0011-R5b-SM-5L3F2 87.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 86.9
GTEX-S7PM-0011-R5A-SM-3NM8G 85.8
GTEX-ZV68-0011-R5a-SM-4YCDW 84.7
GTEX-12WSH-0011-R5b-SM-5P9F3 83.6
GTEX-13CF2-0011-R5a-SM-5LZWS 81.0
GTEX-139T8-0011-R5b-SM-5J1MO 67.0
GTEX-1477Z-0011-R5b-SM-5PNUO 66.0
GTEX-145MG-0011-R5b-SM-5S2VU 55.6
GTEX-13NZA-0011-R5b-SM-5KM4K 51.1
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

481.4

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 481.4
FF:10164-103B2 76 years, female 577.1
FF:10379-105H1 89 years, female 385.8

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