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SERINC1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:96.3TPM
GTEx:71.2RPKM
FANTOM5:168.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Low
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA035738

  

Antibody HPA035739

  

Endothelial cells

 High   Medium  

Glandular cells

 High   Low  

Peripheral nerve/ganglion

 High   Low  
   
   

COLON - HPA RNA-seq

Average TPM

96.3
overview Male, age 54
Sample 1
TPM: 104.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 89.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 56.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 108.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 82.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 88.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 90.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 90.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 113.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 101.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 135.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 132.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 57.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

71.2

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 82.5
Samples: 149

Max RPKM: 136.3
Min RPKM: 46.2
Std RPKM: 16.7
Median RPKM: 81.6
GTEX-13SLW-2826-SM-5Q5ES 136.3
GTEX-13111-1926-SM-5GCOL 126.8
GTEX-148VJ-2426-SM-5NQ9Y 125.8
GTEX-Y114-1626-SM-4TT7I 123.1
GTEX-11WQK-2526-SM-5CVL8 119.4
GTEX-WFON-1326-SM-4LVMN 119.3
GTEX-1211K-1826-SM-5EGJ2 110.2
GTEX-13VXT-2026-SM-5L3EW 110.0
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 62.7
Samples: 196

Max RPKM: 140.5
Min RPKM: 24.3
Std RPKM: 23.6
Median RPKM: 55.8
GTEX-ZXES-1626-SM-5NQ7L 140.5
GTEX-12ZZZ-2426-SM-5GCNN 124.6
GTEX-117YX-0826-SM-5H11J 123.6
GTEX-13OVG-1426-SM-5K7VP 123.0
GTEX-148VJ-2626-SM-5QGPI 119.6
GTEX-11TTK-2426-SM-5PNYO 119.2
GTEX-OXRL-1426-SM-3NM9E 111.2
GTEX-S341-1426-SM-4AD6U 109.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

168.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 168.2
FF:10014-101C5 62,83,84 years, mixed 168.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.