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Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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SERINC1
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TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:221.9TPM
GTEx:62.5RPKM
FANTOM5:216.5Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody HPA035738

 

Antibody HPA035739

 

Glandular cells

High   Not detected  
   
   

PROSTATE - HPA RNA-seq

Average TPM

221.9

overview Male, age 62
Sample 1
TPM: 152.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 198.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 179.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 238.5
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 268.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 278.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 257.9
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 192.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 257.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

62.5

GTEx sample id

RPKM

 

Prostate

Prostate
RPKM: 62.5
Samples: 106

Max RPKM: 123.1
Min RPKM: 30.4
Std RPKM: 17.1
Median RPKM: 61.8
GTEX-12BJ1-1226-SM-5LUAE 123.1
GTEX-WFG7-1826-SM-3GIL1 107.0
GTEX-S3XE-1326-SM-4AD4H 95.8
GTEX-11P7K-0626-SM-5985Z 92.2
GTEX-ZVP2-0826-SM-59HJ6 91.5
GTEX-VJYA-1226-SM-3GIJ6 91.3
GTEX-WK11-2626-SM-4OOSK 87.9
GTEX-14C5O-2826-SM-5RQI6 87.1
GTEX-14E6E-1126-SM-5S2R4 87.1
GTEX-OOBJ-2026-SM-3NB1R 85.5
GTEX-13NYS-1026-SM-5KLZT 85.3
GTEX-13N2G-1826-SM-5KM1I 84.6
GTEX-ZLFU-1726-SM-4WWBU 83.3
GTEX-12ZZZ-2026-SM-5LZWJ 82.4
GTEX-12696-2226-SM-5EQ65 82.0
GTEX-ZTTD-2726-SM-57WFA 81.7
GTEX-131XF-1926-SM-5DUW4 80.9
GTEX-148VJ-1826-SM-5Q5DV 80.5
GTEX-11P82-1126-SM-5BC5K 77.3
GTEX-Y9LG-1826-SM-4VBQC 77.3
GTEX-13RTJ-2126-SM-5S2PZ 76.3
GTEX-ZT9W-1626-SM-4YCDQ 76.0
GTEX-11EQ9-1726-SM-5HL6U 75.4
GTEX-SNOS-1026-SM-4DM4Y 74.7
GTEX-13111-1326-SM-5GCNO 74.1
GTEX-WFON-1626-SM-4LVMV 73.6
GTEX-ZTX8-1026-SM-5EGHD 73.5
GTEX-13O61-1726-SM-5KM46 73.0
GTEX-ZPU1-2026-SM-57WFI 72.1
GTEX-117YW-1426-SM-5EGGO 71.9
GTEX-PLZ6-1126-SM-3P5ZR 71.7
GTEX-111YS-1726-SM-5GIED 71.5
GTEX-QV31-1026-SM-4R1K3 70.9
GTEX-132QS-1126-SM-5P9GC 70.6
GTEX-WOFM-0326-SM-4OOSL 69.3
GTEX-QV44-1526-SM-4R1KI 68.3
GTEX-ZDYS-1226-SM-5IJF3 68.3
GTEX-XMK1-1026-SM-4B65H 67.9
GTEX-1399T-1226-SM-5P9J5 67.5
GTEX-11TT1-2026-SM-5EQM8 66.9
GTEX-13O21-1126-SM-5N9EV 66.7
GTEX-1399R-0526-SM-5IJEF 66.3
GTEX-SJXC-2026-SM-4DM6N 66.2
GTEX-117YX-1526-SM-5H12T 65.9
GTEX-XAJ8-0626-SM-47JY4 65.4
GTEX-11NSD-0826-SM-5986S 64.6
GTEX-QLQ7-1326-SM-4R1JY 64.2
GTEX-YJ8A-1126-SM-5IFJU 63.9
GTEX-WFG8-1826-SM-4LVM4 63.8
GTEX-11O72-2726-SM-5HL6K 63.6
GTEX-XGQ4-1826-SM-4AT6F 63.3
GTEX-13FTW-1226-SM-5LZZ1 62.2
GTEX-V955-1826-SM-4JBIL 61.9
GTEX-X5EB-1826-SM-4E3K8 61.8
GTEX-QMRM-1426-SM-4R1K8 60.9
GTEX-U4B1-1426-SM-4DXTX 60.9
GTEX-13FHO-2826-SM-5K7ZA 60.6
GTEX-111CU-1526-SM-5N9FS 59.9
GTEX-RM2N-1126-SM-48FCY 59.8
GTEX-139T6-1526-SM-5P9G6 58.7
GTEX-12C56-1326-SM-5FQSV 58.5
GTEX-REY6-2126-SM-48FD9 58.1
GTEX-XPVG-2026-SM-4B65E 57.7
GTEX-YF7O-1926-SM-4W1YQ 57.3
GTEX-14ABY-0726-SM-5Q5DF 56.9
GTEX-13OW8-0426-SM-5J2NR 56.5
GTEX-NPJ8-2426-SM-3MJHL 55.9
GTEX-UTHO-2726-SM-4JBH9 55.6
GTEX-T8EM-1826-SM-4DM7F 53.9
GTEX-13FXS-2826-SM-5LZYC 53.1
GTEX-13G51-2326-SM-5LZXV 53.1
GTEX-WH7G-1726-SM-4LVKY 52.6
GTEX-11OF3-1726-SM-5GU5Q 52.5
GTEX-U8XE-2526-SM-4E3IT 52.4
GTEX-ZZ64-0926-SM-5E44L 52.2
GTEX-Y8E4-2126-SM-5RQHO 51.5
GTEX-11DYG-2526-SM-5N9BB 51.4
GTEX-OOBK-2025-SM-3LK5S 51.4
GTEX-SNMC-0926-SM-4DM5U 51.3
GTEX-U412-2026-SM-4DXSI 49.3
GTEX-ZY6K-1526-SM-5GZXE 49.0
GTEX-111FC-2026-SM-5GZYO 48.4
GTEX-144GM-0826-SM-5O98R 48.3
GTEX-146FQ-1726-SM-5QGPX 48.3
GTEX-11TUW-2126-SM-5GU7B 48.0
GTEX-S95S-1026-SM-4B64M 47.8
GTEX-YB5E-1826-SM-5IFI4 47.7
GTEX-11ZUS-2126-SM-5N9E6 47.1
GTEX-S4Q7-1026-SM-4AD75 47.1
GTEX-14BMV-2326-SM-5RQJ4 45.5
GTEX-S33H-1826-SM-4AD65 45.2
GTEX-QEG4-2226-SM-4R1JM 43.2
GTEX-U3ZM-0926-SM-4DXSW 42.8
GTEX-Q2AI-1126-SM-48U19 42.0
GTEX-XQ3S-2526-SM-4BOOG 40.4
GTEX-WZTO-0926-SM-4PQZ3 39.9
GTEX-RWSA-2026-SM-47JX8 39.7
GTEX-XOTO-2826-SM-4B65I 38.9
GTEX-145LT-0626-SM-5O99E 37.0
GTEX-11WQK-2726-SM-5EQMU 36.6
GTEX-OIZH-2026-SM-3NB1M 36.0
GTEX-ZUA1-2826-SM-59HLE 34.5
GTEX-132NY-2826-SM-5P9G2 33.0
GTEX-V1D1-1926-SM-4JBGX 32.9
GTEX-145LV-1226-SM-5S2QH 32.7
GTEX-NFK9-2226-SM-3MJGP 30.4
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

216.5

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 216.5
FF:10022-101D4 73,79,93 years, male 216.5

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