We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
CUTA
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:75.6RPKM
FANTOM5:195.8Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody HPA064369

 

Antibody CAB016787

 

Glial cells

Not detected   Low  

Neuronal cells

Medium   High  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

75.6

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 75.6
Samples: 117

Max RPKM: 134.6
Min RPKM: 23.6
Std RPKM: 24.9
Median RPKM: 77
GTEX-ZUA1-0011-R5b-SM-51MTG 134.6
GTEX-13G51-0011-R5a-SM-5L3EB 124.6
GTEX-12WSC-0011-R5b-SM-5CVNS 119.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 119.3
GTEX-1399T-0011-R5b-SM-5IJDK 118.6
GTEX-T6MN-0011-R5A-SM-32QPD 117.5
GTEX-X585-0011-R5A-SM-46MVI 116.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 115.1
GTEX-13X6K-0011-R5b-SM-5PNUE 113.5
GTEX-TSE9-0011-R5A-SM-3DB7J 109.4
GTEX-14BIM-0011-R5b-SM-5S2RM 108.8
GTEX-12WSA-0011-R5b-SM-5GU5I 108.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 107.0
GTEX-131YS-0011-R5b-SM-5K7YB 106.2
GTEX-1313W-0011-R5b-SM-5L3EP 102.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 102.2
GTEX-13VXU-0011-R5a-SM-5O9D7 101.0
GTEX-145MH-0011-R5a-SM-5P9JT 100.1
GTEX-11NV4-0011-R5a-SM-5NQ88 99.9
GTEX-13FXS-0011-R5b-SM-5LZYE 99.3
GTEX-13X6J-0011-R5b-SM-5PNWT 98.7
GTEX-139TT-0011-R5b-SM-5K7W8 97.8
GTEX-132Q8-0011-R5a-SM-5IJDM 97.7
GTEX-11OF3-0011-R5a-SM-57WB4 97.4
GTEX-WL46-0011-R5A-SM-3LK6V 95.9
GTEX-13FLW-0011-R5a-SM-5LZX6 95.6
GTEX-11H98-0011-R5b-SM-57WCF 95.4
GTEX-T5JC-0011-R5A-SM-32PLK 95.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 94.5
GTEX-12WSF-0011-R5a-SM-5HL8K 94.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 93.7
GTEX-11GSP-0011-R5a-SM-57WBE 93.1
GTEX-QVJO-0011-R5A-SM-2S1QM 92.4
GTEX-13NYB-0011-R5a-SM-5MR45 92.2
GTEX-N7MS-0011-R5a-SM-2HMK8 91.7
GTEX-RU72-0011-R5A-SM-2TF6U 91.7
GTEX-13SLX-0011-R5a-SM-5O9BV 90.6
GTEX-WZTO-0011-R5B-SM-3NMC5 89.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 88.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 86.8
GTEX-S7SE-0011-R5A-SM-2XCDA 86.8
GTEX-Z93S-0011-R5b-SM-4RGNI 86.7
GTEX-145LS-0011-R5a-SM-5SI65 86.6
GTEX-13O3O-0011-R5b-SM-5KM44 86.3
GTEX-WHSE-0011-R5A-SM-3P5ZO 84.8
GTEX-WWYW-0011-R5A-SM-3NB3E 84.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 84.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 83.9
GTEX-13FLV-0011-R5a-SM-5LZWT 83.9
GTEX-14ABY-0011-R5b-SM-5SI7B 83.7
GTEX-WVLH-0011-R5A-SM-3MJFW 83.4
GTEX-R55E-0011-R5A-SM-2TC5N 82.6
GTEX-13JUV-0011-R5a-SM-5LZY5 80.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 80.6
GTEX-N7MT-0011-R5a-SM-2I3G6 80.4
GTEX-UTHO-0011-R5A-SM-3GIJD 80.2
GTEX-13OVH-0011-R5b-SM-5KM4L 80.1
GTEX-13OW6-0011-R5a-SM-5O9BK 79.9
GTEX-P44H-0011-R5A-SM-2XCEX 77.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 76.5
GTEX-13OVL-0011-R5b-SM-5L3FU 75.9
GTEX-12WSB-0011-R5b-SM-5GU67 75.7
GTEX-13OW7-0011-R5b-SM-5O9DM 75.1
GTEX-OHPN-0011-R5A-SM-2I5FF 74.4
GTEX-13CZV-0011-R5a-SM-5K7XA 73.8
GTEX-13NYS-0011-R5a-SM-5MR4D 73.6
GTEX-13X6I-0011-R5a-SM-5PNWW 73.1
GTEX-13OW5-0011-R5b-SM-5L3FR 70.3
GTEX-13JVG-0011-R5a-SM-5MR4O 68.7
GTEX-RVPV-0011-R5A-SM-2TF69 67.4
GTEX-13S7M-0011-R5b-SM-5P9HS 67.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 66.9
GTEX-XOTO-0011-R5A-SM-4B657 66.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 66.5
GTEX-T2IS-0011-R5A-SM-32QP4 66.4
GTEX-NL3H-0011-R5a-SM-2I3GB 64.2
GTEX-ZE7O-0011-R5a-SM-57WBO 64.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 63.7
GTEX-X4XX-0011-R5A-SM-46MWN 62.9
GTEX-12WSD-0011-R5b-SM-5CVNG 62.6
GTEX-139T8-0011-R5b-SM-5J1MO 62.1
GTEX-13CIG-0011-R5b-SM-5L3F2 61.0
GTEX-NL4W-0011-R5a-SM-2I3GD 61.0
GTEX-XMD1-0011-R5A-SM-4AT47 60.9
GTEX-PVOW-0011-R5A-SM-32PL7 60.2
GTEX-RVPU-0011-R5A-SM-2XCAD 59.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 59.6
GTEX-YFC4-0011-R5a-SM-4RGLR 58.3
GTEX-144GO-0011-R5a-SM-5PNUR 56.4
GTEX-12ZZX-0011-R5a-SM-5HL89 56.3
GTEX-ZXG5-0011-R5b-SM-57WBN 55.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 54.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 53.2
GTEX-14BIN-0011-R5b-SM-5SI78 53.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 52.7
GTEX-QMR6-0011-R5A-SM-32PKT 50.9
GTEX-X261-0011-R5A-SM-3NMB4 49.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 46.1
GTEX-ZV68-0011-R5a-SM-4YCDW 44.8
GTEX-11WQC-0011-R5a-SM-5BC74 44.7
GTEX-ZVT3-0011-R5a-SM-51MSI 44.1
GTEX-NPJ7-0011-R5a-SM-33HBK 43.7
GTEX-13112-0011-R5b-SM-5DUV8 42.5
GTEX-12WSH-0011-R5b-SM-5P9F3 41.9
GTEX-YJ89-0011-R5a-SM-4V6GM 41.8
GTEX-144GL-0011-R5b-SM-5PNUJ 41.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 41.0
GTEX-OXRN-0011-R5A-SM-2I5EF 40.5
GTEX-1445S-0011-R5a-SM-5PNUS 39.1
GTEX-139TS-0011-R5b-SM-5J2MZ 38.8
GTEX-13FHP-0011-R5b-SM-5LZY2 33.6
GTEX-11UD1-0011-R5b-SM-5P9FP 31.4
GTEX-13CF2-0011-R5a-SM-5LZWS 29.8
GTEX-1477Z-0011-R5b-SM-5PNUO 28.4
GTEX-145MG-0011-R5b-SM-5S2VU 25.2
GTEX-S7PM-0011-R5A-SM-3NM8G 24.8
GTEX-13NZA-0011-R5b-SM-5KM4K 23.6
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

195.8

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 195.8
FF:10379-105H1 89 years, female 232.2
FF:10164-103B2 76 years, female 159.4

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.