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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:154.6TPM
GTEx:73.5RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:Low
Neuronal cells:Low
Neuropil:Medium
 

Antibody staining

Antibody HPA064369

 

Antibody CAB016787

 

Endothelial cells

Medium   Medium  

Glial cells

Low   Not detected  

Neuronal cells

Low   Not detected  

Neuropil

Medium   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

154.6

N/A Male, age 5
Sample 1
TPM: 152.7
overview Female, age 40
Sample 2
TPM: 150.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 160.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

73.5

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 73.3
Samples: 114

Max RPKM: 105.6
Min RPKM: 46.2
Std RPKM: 12.4
Median RPKM: 74
GTEX-13SLX-3126-SM-5S2Q5 105.6
GTEX-14BMV-3026-SM-5S2PQ 100.0
GTEX-X585-3026-SM-46MWF 98.7
GTEX-13VXU-2926-SM-5LU5C 95.3
GTEX-11DXY-3226-SM-5GIDE 93.1
GTEX-11OC5-0726-SM-5P9JK 92.9
GTEX-117XS-3026-SM-5N9CA 92.3
GTEX-1192X-3126-SM-5N9BY 90.4
GTEX-12ZZY-3026-SM-5GCOU 90.4
GTEX-13OW8-2826-SM-5L3GC 90.1
GTEX-11ONC-2926-SM-5P9JM 89.0
GTEX-145MG-3026-SM-5RQJA 88.5
GTEX-1399T-3026-SM-5KLZC 87.4
GTEX-12WSC-3026-SM-5GCNF 86.1
GTEX-XLM4-3026-SM-4AT6L 86.0
GTEX-145LS-3126-SM-5Q5BY 85.5
GTEX-13FHO-3026-SM-5J1O9 85.4
GTEX-11GSO-2926-SM-5HL73 84.8
GTEX-144FL-3026-SM-5O99C 84.5
GTEX-1313W-3126-SM-5LZUI 84.3
GTEX-Z93S-2926-SM-57WB9 83.9
GTEX-ZYFD-3026-SM-5E44C 83.8
GTEX-13NYB-3026-SM-5IJD7 83.7
GTEX-13FLW-1426-SM-5K7YE 83.6
GTEX-13FXS-3126-SM-5J2NN 83.6
GTEX-11NUK-2926-SM-5A5MD 83.5
GTEX-131YS-3126-SM-5KLYT 83.4
GTEX-T5JC-2426-SM-3NMDB 83.4
GTEX-12ZZW-2926-SM-5LZUP 83.0
GTEX-12ZZX-2926-SM-5GCOQ 82.2
GTEX-T6MN-2626-SM-32PMQ 82.2
GTEX-WVLH-3026-SM-3MJG9 81.3
GTEX-145MH-3026-SM-5Q5DZ 80.9
GTEX-14ASI-3026-SM-5S2PN 80.7
GTEX-ZE7O-3126-SM-5HL5X 80.4
GTEX-YFC4-3126-SM-5PNV6 80.1
GTEX-13NYC-2826-SM-5K7WR 79.6
GTEX-YJ89-3026-SM-5IFJI 79.3
GTEX-13OVH-3026-SM-5MR4N 79.2
GTEX-WL46-2926-SM-3LK82 78.8
GTEX-13OW6-3026-SM-5J2MI 78.5
GTEX-WHSE-3026-SM-3P5ZH 78.4
GTEX-ZVT3-3026-SM-5E43N 78.2
GTEX-11PRG-2926-SM-5987A 77.7
GTEX-WZTO-2926-SM-3NM9I 77.6
GTEX-Y8DK-0826-SM-4TT3T 77.5
GTEX-NPJ8-1526-SM-2D7VU 77.4
GTEX-XOTO-3026-SM-4B65M 77.0
GTEX-WWYW-3126-SM-3NB39 76.4
GTEX-11GS4-3126-SM-5A5LH 75.9
GTEX-12126-1026-SM-5P9JJ 75.8
GTEX-ZZPT-3026-SM-5GZXH 75.7
GTEX-13PL6-3126-SM-5LUAR 75.3
GTEX-132Q8-3026-SM-5PNVG 75.2
GTEX-11DXW-1126-SM-5H12Q 75.1
GTEX-13O3O-3126-SM-5KM3H 74.8
GTEX-13QIC-2926-SM-5J2NF 74.1
GTEX-QVUS-2826-SM-3GADB 73.9
GTEX-X4XX-3026-SM-3NMB2 73.8
GTEX-ZUA1-3026-SM-59HJC 73.7
GTEX-RU72-3026-SM-5SI7Y 73.6
GTEX-1128S-2726-SM-5H12C 73.5
GTEX-QVJO-1426-SM-2S1QY 73.5
GTEX-13NYS-3126-SM-5KLYV 73.4
GTEX-13O3Q-2926-SM-5KM45 73.2
GTEX-139T8-1026-SM-5J2MC 73.1
GTEX-TSE9-3026-SM-3DB76 72.2
GTEX-Y111-2726-SM-4TT3N 72.0
GTEX-144GL-3026-SM-5Q5CW 71.7
GTEX-145MF-2726-SM-5O995 71.4
GTEX-13FHP-3026-SM-5IJBS 71.3
GTEX-11OF3-2926-SM-5HL78 70.4
GTEX-12ZZZ-3026-SM-5BC67 69.7
GTEX-11EI6-3026-SM-5GZZO 69.6
GTEX-ZAK1-3026-SM-5S2MJ 69.5
GTEX-ZAJG-3126-SM-5HL9J 68.5
GTEX-12WSH-3026-SM-5CVNI 68.1
GTEX-13OVJ-2826-SM-5L3GW 67.9
GTEX-13G51-3026-SM-5IJB8 67.8
GTEX-13JVG-3126-SM-5L3FH 67.5
GTEX-T2IS-3026-SM-32QPM 67.2
GTEX-11ZUS-2926-SM-5FQSL 67.0
GTEX-111FC-3126-SM-5GZZ2 65.9
GTEX-R55F-1326-SM-5S2V4 65.8
GTEX-14A5I-2926-SM-5Q5CQ 65.5
GTEX-13S7M-3126-SM-5RQJQ 64.8
GTEX-Q2AG-2926-SM-2HMJ3 64.6
GTEX-RNOR-2326-SM-2TF4I 64.0
GTEX-11GSP-3226-SM-5986O 63.8
GTEX-13JUV-2926-SM-5LZX7 63.6
GTEX-1117F-3226-SM-5N9CT 62.9
GTEX-13PVQ-3026-SM-5SI93 62.7
GTEX-12WSD-3126-SM-5HL7P 61.8
GTEX-13X6J-3026-SM-5Q5CU 61.8
GTEX-131XW-3126-SM-5LZUC 61.4
GTEX-N7MT-1126-SM-5SI7V 59.9
GTEX-13X6K-2926-SM-5Q5D5 59.4
GTEX-11EMC-3226-SM-5EGKW 58.7
GTEX-NPJ7-2726-SM-2I3FT 57.6
GTEX-11WQK-3026-SM-5EQL6 56.2
GTEX-QDT8-2926-SM-32PKC 55.0
GTEX-13OW7-3026-SM-5L3GY 54.8
GTEX-11O72-2926-SM-5BC4V 54.2
GTEX-QMR6-1426-SM-32PLA 54.1
GTEX-PVOW-2526-SM-2XCF7 53.8
GTEX-OXRN-2426-SM-2I5EQ 53.1
GTEX-12WSA-2926-SM-5EQ4D 52.0
GTEX-UTHO-3026-SM-3GAFB 51.8
GTEX-13IVO-2926-SM-5L3CZ 49.8
GTEX-147GR-3026-SM-5S2ML 49.7
GTEX-11TTK-2926-SM-5PNYP 49.3
GTEX-11NV4-2126-SM-5N9DS 48.9
GTEX-1445S-3026-SM-5O9BR 47.1
GTEX-PWO3-0926-SM-2I5EY 46.2
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 73.7
Samples: 108

Max RPKM: 123.5
Min RPKM: 36.3
Std RPKM: 17.7
Median RPKM: 74.9
GTEX-12ZZY-0011-R10b-SM-5HL7W 123.5
GTEX-13O3O-0011-R10a-SM-5LUA9 112.4
GTEX-14ASI-0011-R10b-SM-5S2VZ 111.9
GTEX-13NYS-0011-R10a-SM-5MR4S 108.8
GTEX-13RTJ-0011-R10b-SM-5O9CW 107.9
GTEX-13SLX-0011-R10a-SM-5P9HV 106.9
GTEX-14BIN-0011-R10a-SM-5S2UA 103.5
GTEX-12WSC-0011-R10a-SM-5GU57 99.9
GTEX-147GR-0011-R10b-SM-5S2UM 99.0
GTEX-13OW7-0011-R10a-SM-5L3H3 95.6
GTEX-13O3Q-0011-R10b-SM-5KM39 95.1
GTEX-145MG-0011-R10a-SM-5PNWG 95.1
GTEX-12WSD-0011-R10b-SM-5GU79 93.3
GTEX-13CZV-0011-R10b-SM-5LZYD 92.3
GTEX-13N1W-0011-R10b-SM-5MR4H 91.2
GTEX-1313W-0011-R10b-SM-5DUXA 90.6
GTEX-12WSF-0011-R10a-SM-5LZVH 90.2
GTEX-X585-0011-R10A-SM-46MUY 90.0
GTEX-XLM4-0011-R10A-SM-4AT5P 89.1
GTEX-13FLW-0011-R10b-SM-5LZZF 88.8
GTEX-ZVZQ-0011-R10b-SM-51MRT 87.1
GTEX-131YS-0011-R10b-SM-5EQ5N 87.0
GTEX-Y8DK-0011-R10A-SM-4SOK1 86.8
GTEX-13QIC-0011-R10a-SM-5O9C7 86.5
GTEX-T6MN-0011-R10A-SM-32QP7 86.1
GTEX-132Q8-0011-R10b-SM-5DUWZ 85.9
GTEX-13NYB-0011-R10a-SM-5KM43 85.6
GTEX-13X6K-0011-R10a-SM-5P9JR 85.6
GTEX-13OW6-0011-R10a-SM-5L3HE 84.8
GTEX-12WSE-0011-R10b-SM-5P9JV 84.7
GTEX-T5JC-0011-R10A-SM-32PM2 84.0
GTEX-13FXS-0011-R10a-SM-5J2MA 83.8
GTEX-X4EP-0011-R10B-SM-4QASJ 83.3
GTEX-YFC4-0011-R10a-SM-4SOK5 82.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC 81.9
GTEX-11H98-0011-R10b-SM-5NQ98 81.7
GTEX-NPJ8-0011-R10A-SM-2YUMO 81.2
GTEX-X4XX-0011-R10B-SM-46MWO 80.8
GTEX-YJ89-0011-R10a-SM-4SOK9 80.8
GTEX-Z93S-0011-R10a-SM-4RGNM 79.8
GTEX-12WSH-0011-R10a-SM-5LZUS 79.7
GTEX-NL3H-0011-R10A-SM-2I3E9 79.6
GTEX-WWYW-0011-R10A-SM-3NB35 79.4
GTEX-13X6J-0011-R10b-SM-5PNWA 78.6
GTEX-131XH-0011-R10a-SM-5EGLJ 78.3
GTEX-N7MT-0011-R10A-SM-2I3E1 78.2
GTEX-12ZZX-0011-R10b-SM-5DUWK 77.8
GTEX-145MH-0011-R10b-SM-5PNUK 77.7
GTEX-13S7M-0011-R10b-SM-5PNZB 76.9
GTEX-ZDXO-0011-R10a-SM-4WWD8 76.4
GTEX-WVLH-0011-R10A-SM-3MJFM 76.1
GTEX-ZAB4-0011-R10a-SM-4SOKH 76.0
GTEX-WZTO-0011-R10B-SM-4E3KB 75.2
GTEX-WL46-0011-R10A-SM-3MJFQ 75.0
GTEX-RVPU-0011-R10A-SM-2XCAH 74.8
GTEX-ZUA1-0011-R10a-SM-51MT6 74.6
GTEX-S7SE-0011-R10A-SM-2XCDF 74.4
GTEX-13JUV-0011-R10b-SM-5LZXR 73.3
GTEX-13X6I-0011-R10a-SM-5PNWI 73.0
GTEX-13OVL-0011-R10a-SM-5L3GS 71.5
GTEX-145LS-0011-R10a-SM-5PNUQ 71.1
GTEX-N7MS-0011-R10A-SM-2HMJK 70.9
GTEX-14BIL-0011-R10a-SM-5SI75 70.8
GTEX-12WSM-0011-R10a-SM-5DUWV 70.7
GTEX-ZVT3-0011-R10b-SM-57WB6 70.7
GTEX-ZF28-0011-R10a-SM-4WWEH 70.3
GTEX-13FHO-0011-R10b-SM-5J2MM 68.1
GTEX-13FLV-0011-R10b-SM-5LZZ2 67.8
GTEX-NPJ7-0011-R10A-SM-2I3E5 67.7
GTEX-13SLW-0011-R10a-SM-5S2UI 66.6
GTEX-147F4-0011-R10b-SM-5S2WC 66.1
GTEX-13OW8-0011-R10a-SM-5L3H6 65.6
GTEX-Q2AG-0011-R10A-SM-2HMLA 65.0
GTEX-145LU-0011-R10a-SM-5PNWJ 64.8
GTEX-12WSA-0011-R10b-SM-5P9ET 64.5
GTEX-13N2G-0011-R10a-SM-5MR34 64.5
GTEX-13QJC-0011-R10a-SM-5SI63 64.4
GTEX-13G51-0011-R10b-SM-5LZYF 64.0
GTEX-11WQC-0011-R10a-SM-57WCT 63.2
GTEX-TSE9-0011-R10A-SM-3DB7O 62.7
GTEX-139TS-0011-R10a-SM-5K7TU 62.0
GTEX-QVJO-0011-R10A-SM-2S1QJ 60.6
GTEX-XMD1-0011-R10A-SM-4AT4A 60.1
GTEX-11GSP-0011-R10a-SM-5NQ7J 59.9
GTEX-12126-0011-R10b-SM-5BC6T 57.5
GTEX-QMR6-0011-R10A-SM-32PKO 56.2
GTEX-P44H-0011-R10A-SM-2XCEK 56.1
GTEX-13OVJ-0011-R10b-SM-5L3HT 54.8
GTEX-13FTZ-0011-R10b-SM-5KLZS 53.8
GTEX-12ZZW-0011-R10b-SM-5HL9X 53.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 53.6
GTEX-11ZUS-0011-R10b-SM-5BC79 52.5
GTEX-13JVG-0011-R10b-SM-5KM2P 52.2
GTEX-1445S-0011-R10a-SM-5PNWB 51.0
GTEX-11WQK-0011-R10a-SM-5BC6R 50.7
GTEX-13NZA-0011-R10b-SM-5KM54 50.3
GTEX-NL4W-0011-R10A-SM-2I3DY 50.1
GTEX-OXRN-0011-R10A-SM-2I5GC 50.1
GTEX-ZXG5-0011-R10a-SM-57WDD 50.0
GTEX-X261-0011-R10B-SM-4E3JT 49.5
GTEX-QVUS-0011-R10A-SM-3GIK3 47.5
GTEX-ZV68-0011-R10a-SM-51MT7 47.0
GTEX-1477Z-0011-R10b-SM-5S2RF 45.5
GTEX-QDT8-0011-R10A-SM-32PKG 43.1
GTEX-14753-0011-R10b-SM-5S2WE 42.3
GTEX-131XW-0011-R10a-SM-5DUVA 39.1
GTEX-13IVO-0011-R10a-SM-5LZY3 39.0
GTEX-OXRO-0011-R10A-SM-2I5EH 36.3
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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