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Field

Term
Gene name

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Chromosome

External id

In atlas

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Validation

Method

Validation

Method

Validation

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Cell type

Expression

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Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA URINARY BLADDER

GENE/PROTEIN

Antibody validation


Dictionary

Urinary bladder

URINARY BLADDER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:16.0TPM
GTEx:15.5RPKM
FANTOM5:14.3Tags Per Million

URINARY BLADDER - Annotated protein expression

Annotated protein
expression

Urothelial cells:Medium
 

Antibody staining

Antibody HPA035941

 

Urothelial cells

Medium  
 

URINARY BLADDER - HPA RNA-seq

Average TPM

16.0

overview Male, age 74
Sample 1
TPM: 13.7
Cell types%
Urothelial cells: 5
Smooth muscle cells: 60
Fibroblasts: 20
Endothelial cells: 10
Other cell types: 5
overview Male, age 80
Sample 2
TPM: 18.2
Cell types%
Urothelial cells: 10
Smooth muscle cells: 45
Fibroblasts: 15
Endothelial cells: 10
Other cell types: 20

URINARY BLADDER - GTEx RNA-seq

Average RPKM

15.5

GTEx sample id

RPKM

12.914.918.711.119.6024681012141618
 
12.914.918.711.119.6024681012141618

Bladder

Bladder
RPKM: 15.5
Samples: 11

Max RPKM: 19.6
Min RPKM: 11.1
Std RPKM: 3
Median RPKM: 14.9
GTEX-SNMC-0826-SM-4DM66 19.6
GTEX-U3ZN-1226-SM-4DXUD 19.3
GTEX-S4UY-0926-SM-4AD6O 18.8
GTEX-SNOS-0526-SM-4DM54 18.6
GTEX-S4Q7-0926-SM-4AD5D 16.6
GTEX-U4B1-1226-SM-4DXT7 14.9
GTEX-S3XE-1226-SM-4AD4L 14.4
GTEX-S32W-1126-SM-4AD5V 12.9
GTEX-TMMY-1526-SM-4DXST 12.9
GTEX-SE5C-1026-SM-4BRUG 11.7
GTEX-U3ZM-0826-SM-4DXU6 11.1
Show all

URINARY BLADDER - FANTOM5 CAGE

Average Tags Per Million

14.3

FANTOM5 sample id

Sample description

Tags Per Million

Bladder
Tags Per Million: 14.3
FF:10011-101C2 55,58,79 years, mixed 14.3

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