Tissue expression of HAVCR1 - Staining in colon

COLON - Expression summary

RNA expression

HPA:	4.9	TPM
GTEx:	0.2	RPKM
FANTOM5:	0.9	Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM	4.9

Male, age 54

Sample 1
TPM: 0.5

Cell types%

Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25

Female, age 57

Sample 2
TPM: 7.5

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 80

Sample 3
TPM: 0.2

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 68

Sample 4
TPM: 8.5

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 68

Sample 5
TPM: 0.4

Cell types%

Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70

Female, age 61

Sample 6
TPM: 0.8

Cell types%

Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30

Male, age 80

Sample 7
TPM: 5.9

Cell types%

Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

Female, age 78

Sample 8
TPM: 2.5

Cell types%

Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50

Male, age 84

Sample 9
TPM: 1.6

Cell types%

Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35

Male, age 80

Sample 10
TPM: 15.3

Cell types%

Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45

Female, age 78

Sample 11
TPM: 16.4

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 69

Sample 12
TPM: 3.6

Cell types%

Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45

Female, age 72

Sample 13
TPM: 0.6

Cell types%

Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM	0.2

GTEx sample id

RPKM

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.0

Samples: 149

Max RPKM: 0.2
Min RPKM: 0
Std RPKM: 0
Median RPKM: 0

GTEX-11ONC-1926-SM-5GU75

0.2

GTEX-XBED-1726-SM-47JYO

0.2

GTEX-11WQK-2526-SM-5CVL8

0.1

GTEX-13OVI-2126-SM-5KM3U

0.1

GTEX-146FH-2426-SM-5Q5EW

0.1

GTEX-148VJ-2426-SM-5NQ9Y

0.1

GTEX-14E6C-2226-SM-5QGQG

0.1

GTEX-V955-1726-SM-4JBHF

0.1

Show all

Colon - Transverse

Colon - Transverse
RPKM: 0.3

Samples: 196

Max RPKM: 3.2
Min RPKM: 0
Std RPKM: 0.4
Median RPKM: 0.1

GTEX-139YR-2126-SM-5KM11

3.2

GTEX-11DXZ-1726-SM-5H12M

2.5

GTEX-13O21-2426-SM-5MR4A

2.2

GTEX-WHWD-1226-SM-4OOS1

2.1

GTEX-Q734-1126-SM-48TZY

2.0

GTEX-U3ZN-2126-SM-4DXU1

1.9

GTEX-P4QT-1426-SM-3NMCX

1.4

GTEX-11EM3-1526-SM-5A5KN

1.3

Show all

COLON - FANTOM5 CAGE

Average Tags Per Million	0.9

FANTOM5 sample id

Sample description

Tags Per Million

Colon
Tags Per Million: 0.9

FF:10014-101C5

62,83,84 years, mixed

0.9