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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:2085.7TPM
GTEx:198.2RPKM
FANTOM5:3548.0Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA035866

 

Glandular cells

High  
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

2085.7

overview Male, age 65
Sample 1
TPM: 3439.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 547.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 2334.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 2021.9

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

198.2

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 198.2
Samples: 88

Max RPKM: 836.7
Min RPKM: 0.6
Std RPKM: 207.1
Median RPKM: 118
GTEX-1122O-1326-SM-5H11F 836.7
GTEX-XGQ4-1326-SM-4GIDU 814.5
GTEX-ZYFG-2026-SM-5E43Y 676.8
GTEX-VJYA-0926-SM-4KL1N 658.8
GTEX-YB5E-1526-SM-5IFIE 651.0
GTEX-ZLV1-1126-SM-4WWBW 639.9
GTEX-133LE-1426-SM-5IFH1 552.6
GTEX-14E6E-1626-SM-5RQI7 525.1
GTEX-13D11-0726-SM-5LZZB 503.0
GTEX-145LT-1026-SM-5LU9O 484.7
GTEX-ZZ64-0526-SM-5GZXM 475.0
GTEX-Y9LG-1626-SM-5IFHM 466.7
GTEX-11DXX-1626-SM-5H11H 457.4
GTEX-ZPCL-1726-SM-57WEO 443.5
GTEX-YF7O-1826-SM-5IFIU 404.6
GTEX-ZXES-1526-SM-5NQ95 392.4
GTEX-13113-1226-SM-5EGHT 375.7
GTEX-ZYWO-1526-SM-5SIAL 359.2
GTEX-1399S-2026-SM-5KM4B 345.7
GTEX-11I78-1126-SM-5A5K5 338.2
GTEX-13O61-1326-SM-5KM31 331.2
GTEX-ZTPG-2626-SM-57WFX 329.0
GTEX-XXEK-1026-SM-4BRUW 322.7
GTEX-ZVZP-1826-SM-5GZXB 322.0
GTEX-XUZC-1426-SM-4BRV3 311.5
GTEX-11EQ9-1326-SM-5985X 310.6
GTEX-ZA64-1226-SM-5HL7B 283.7
GTEX-X5EB-1626-SM-4E3IV 240.8
GTEX-13PL7-2626-SM-5IFH4 239.3
GTEX-14DAR-1426-SM-5RQIR 218.5
GTEX-131XF-1326-SM-5GCMQ 214.9
GTEX-1399R-2026-SM-5K7WN 196.0
GTEX-ZEX8-1826-SM-57WBH 188.9
GTEX-XAJ8-0526-SM-47JYK 186.1
GTEX-ZTX8-0526-SM-59HLD 186.0
GTEX-11P82-0826-SM-5P9GU 177.2
GTEX-WFJO-0926-SM-4LVM2 177.1
GTEX-ZVP2-1726-SM-5GU5P 175.1
GTEX-ZTSS-0926-SM-59865 170.1
GTEX-13FTW-2026-SM-5IJE2 169.2
GTEX-111YS-1426-SM-5GID8 159.1
GTEX-YEC4-1726-SM-4W21E 137.0
GTEX-13CF3-1226-SM-5LZXN 134.9
GTEX-WH7G-1626-SM-4LVMY 118.6
GTEX-ZVT2-2126-SM-5NQ93 117.4
GTEX-1399U-2126-SM-5IFEZ 108.8
GTEX-WQUQ-2426-SM-4MVNW 97.1
GTEX-13FH7-1226-SM-5IJFK 94.5
GTEX-11NSD-1726-SM-5N9C3 93.4
GTEX-139T6-1026-SM-5IJGC 89.9
GTEX-ZLFU-1526-SM-4WWBT 88.6
GTEX-11P7K-1626-SM-5GU63 77.7
GTEX-11XUK-1426-SM-5EQMG 77.4
GTEX-139YR-2226-SM-5IFFW 77.4
GTEX-ZPIC-2326-SM-57WDW 71.5
GTEX-Z9EW-0926-SM-5CVMM 68.5
GTEX-Y3IK-1726-SM-4YCCR 56.6
GTEX-WFG7-1726-SM-4LVME 54.7
GTEX-12BJ1-1926-SM-5HL9Z 53.1
GTEX-11DXZ-1326-SM-5H11X 52.3
GTEX-13RTK-0826-SM-5Q5C6 52.2
GTEX-11VI4-1626-SM-5EQKO 50.5
GTEX-12WSK-1526-SM-5CVNO 48.3
GTEX-XBED-1426-SM-4AT4G 44.2
GTEX-WRHK-1026-SM-4MVOD 43.5
GTEX-13O21-1026-SM-5IJDU 29.1
GTEX-Y114-1426-SM-4TT6W 26.2
GTEX-13OVI-1926-SM-5IJCG 21.0
GTEX-145ME-0926-SM-5O9AR 19.6
GTEX-X15G-1426-SM-4PQZK 19.4
GTEX-111CU-1326-SM-5NQ8L 18.4
GTEX-13QBU-1926-SM-5IJEW 18.0
GTEX-148VJ-2226-SM-5NQ9M 17.3
GTEX-ZF2S-1726-SM-57WFT 10.6
GTEX-VUSG-1726-SM-4KKZL 5.9
GTEX-1192X-2526-SM-59868 5.3
GTEX-ZP4G-1626-SM-57WGD 5.2
GTEX-Y5LM-1626-SM-4VDTB 5.0
GTEX-ZQG8-2526-SM-57WEQ 3.8
GTEX-XMK1-1826-SM-4B66F 3.5
GTEX-ZQUD-0926-SM-57WE3 3.3
GTEX-117YX-0326-SM-5GICL 2.9
GTEX-WFG8-1626-SM-4LVMB 2.1
GTEX-WEY5-1526-SM-4LMJF 1.4
GTEX-13111-1426-SM-5DUW3 1.3
GTEX-131XG-1726-SM-5LZUR 1.2
GTEX-ZC5H-2326-SM-4WAYT 0.9
GTEX-UPK5-2026-SM-4JBIM 0.6
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

3548.0

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 3548.0
FF:10024-101D6 15,40,85 years, mixed 3548.0

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The Human Protein Atlas project is funded
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