Tissue expression of SSR3 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	63.2	TPM
GTEx:	11.7	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Low
Glial cells:	Medium
Neuronal cells:	Medium
Neuropil:	Medium

Antibody staining	Antibody HPA014906
Endothelial cells	Low
Glial cells	Medium
Neuronal cells	Medium
Neuropil	Medium

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	63.2

Male, age 5

Sample 1
TPM: 56.5

Female, age 40

Sample 2
TPM: 60.5

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 72.7

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	11.7

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 10.7

Samples: 114

Max RPKM: 20
Min RPKM: 5.9
Std RPKM: 2.1
Median RPKM: 10.3

GTEX-X585-3026-SM-46MWF

20.0

GTEX-13OVJ-2826-SM-5L3GW

17.0

GTEX-11WQK-3026-SM-5EQL6

16.4

GTEX-QVUS-2826-SM-3GADB

14.9

GTEX-144FL-3026-SM-5O99C

14.6

GTEX-QMR6-1426-SM-32PLA

14.5

GTEX-13NYC-2826-SM-5K7WR

14.4

GTEX-13NYS-3126-SM-5KLYV

14.1

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 12.9

Samples: 108

Max RPKM: 38.4
Min RPKM: 6.7
Std RPKM: 3.7
Median RPKM: 11.7

GTEX-13N2G-0011-R10a-SM-5MR34

38.4

GTEX-X4EP-0011-R10B-SM-4QASJ

23.1

GTEX-13OVJ-0011-R10b-SM-5L3HT

21.7

GTEX-QDT8-0011-R10A-SM-32PKG

19.8

GTEX-QVUS-0011-R10A-SM-3GIK3

19.0

GTEX-11WQK-0011-R10a-SM-5BC6R

18.6

GTEX-1445S-0011-R10a-SM-5PNWB

18.2

GTEX-12WSD-0011-R10b-SM-5GU79

17.7

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue