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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:153.7TPM
GTEx:34.4RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:High
Neuronal cells:Medium
Neuropil:High
 

Antibody staining

Antibody HPA034994

 

Endothelial cells

Not detected  

Glial cells

High  

Neuronal cells

Medium  

Neuropil

High  
 
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

153.7

N/A Male, age 5
Sample 1
TPM: 145.5
overview Female, age 40
Sample 2
TPM: 136.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 179.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

34.4

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 29.1
Samples: 114

Max RPKM: 74.7
Min RPKM: 12.4
Std RPKM: 9.9
Median RPKM: 27.4
GTEX-13G51-3026-SM-5IJB8 74.7
GTEX-PVOW-2526-SM-2XCF7 59.1
GTEX-UTHO-3026-SM-3GAFB 54.4
GTEX-QMR6-1426-SM-32PLA 54.0
GTEX-13FHP-3026-SM-5IJBS 47.6
GTEX-111FC-3126-SM-5GZZ2 46.3
GTEX-T2IS-3026-SM-32QPM 43.8
GTEX-1313W-3126-SM-5LZUI 42.8
GTEX-WL46-2926-SM-3LK82 42.8
GTEX-QVUS-2826-SM-3GADB 42.2
GTEX-13NYB-3026-SM-5IJD7 41.9
GTEX-12ZZY-3026-SM-5GCOU 41.7
GTEX-QDT8-2926-SM-32PKC 41.0
GTEX-13FLW-1426-SM-5K7YE 40.2
GTEX-1192X-3126-SM-5N9BY 38.3
GTEX-13FHO-3026-SM-5J1O9 38.2
GTEX-N7MT-1126-SM-5SI7V 38.1
GTEX-RNOR-2326-SM-2TF4I 37.5
GTEX-YFC4-3126-SM-5PNV6 37.4
GTEX-T5JC-2426-SM-3NMDB 37.2
GTEX-WZTO-2926-SM-3NM9I 37.2
GTEX-TSE9-3026-SM-3DB76 36.2
GTEX-14BMV-3026-SM-5S2PQ 35.9
GTEX-WHSE-3026-SM-3P5ZH 35.9
GTEX-XLM4-3026-SM-4AT6L 35.6
GTEX-T6MN-2626-SM-32PMQ 35.4
GTEX-131YS-3126-SM-5KLYT 35.3
GTEX-WVLH-3026-SM-3MJG9 35.2
GTEX-11GS4-3126-SM-5A5LH 34.9
GTEX-11DXY-3226-SM-5GIDE 34.7
GTEX-ZAK1-3026-SM-5S2MJ 34.1
GTEX-Y8DK-0826-SM-4TT3T 34.0
GTEX-11ZUS-2926-SM-5FQSL 33.9
GTEX-12ZZZ-3026-SM-5BC67 33.7
GTEX-QVJO-1426-SM-2S1QY 33.3
GTEX-14ASI-3026-SM-5S2PN 32.8
GTEX-13OW6-3026-SM-5J2MI 32.7
GTEX-13OVH-3026-SM-5MR4N 32.5
GTEX-ZUA1-3026-SM-59HJC 32.5
GTEX-WWYW-3126-SM-3NB39 32.4
GTEX-11NUK-2926-SM-5A5MD 31.9
GTEX-13OW8-2826-SM-5L3GC 31.8
GTEX-XOTO-3026-SM-4B65M 31.4
GTEX-13FXS-3126-SM-5J2NN 31.3
GTEX-12ZZX-2926-SM-5GCOQ 31.2
GTEX-145MH-3026-SM-5Q5DZ 30.9
GTEX-11ONC-2926-SM-5P9JM 30.2
GTEX-13X6J-3026-SM-5Q5CU 30.1
GTEX-X4XX-3026-SM-3NMB2 30.1
GTEX-11PRG-2926-SM-5987A 29.8
GTEX-117XS-3026-SM-5N9CA 29.7
GTEX-13NYC-2826-SM-5K7WR 29.4
GTEX-13X6K-2926-SM-5Q5D5 29.4
GTEX-145LS-3126-SM-5Q5BY 29.2
GTEX-ZYFD-3026-SM-5E44C 28.0
GTEX-11GSO-2926-SM-5HL73 27.8
GTEX-NPJ8-1526-SM-2D7VU 27.6
GTEX-13VXU-2926-SM-5LU5C 27.3
GTEX-1399T-3026-SM-5KLZC 26.8
GTEX-11OF3-2926-SM-5HL78 26.4
GTEX-11DXW-1126-SM-5H12Q 26.2
GTEX-14A5I-2926-SM-5Q5CQ 26.0
GTEX-12WSA-2926-SM-5EQ4D 25.4
GTEX-Z93S-2926-SM-57WB9 25.4
GTEX-11O72-2926-SM-5BC4V 25.2
GTEX-12WSC-3026-SM-5GCNF 25.2
GTEX-12126-1026-SM-5P9JJ 25.1
GTEX-144GL-3026-SM-5Q5CW 25.1
GTEX-13PL6-3126-SM-5LUAR 25.0
GTEX-145MF-2726-SM-5O995 24.5
GTEX-Y111-2726-SM-4TT3N 24.1
GTEX-ZZPT-3026-SM-5GZXH 24.0
GTEX-X585-3026-SM-46MWF 23.8
GTEX-RU72-3026-SM-5SI7Y 23.7
GTEX-13O3Q-2926-SM-5KM45 23.6
GTEX-1128S-2726-SM-5H12C 23.5
GTEX-12WSH-3026-SM-5CVNI 23.5
GTEX-145MG-3026-SM-5RQJA 23.4
GTEX-R55F-1326-SM-5S2V4 23.3
GTEX-NPJ7-2726-SM-2I3FT 23.2
GTEX-13SLX-3126-SM-5S2Q5 22.9
GTEX-11NV4-2126-SM-5N9DS 22.8
GTEX-13PVQ-3026-SM-5SI93 22.7
GTEX-132Q8-3026-SM-5PNVG 22.3
GTEX-OXRN-2426-SM-2I5EQ 22.1
GTEX-13O3O-3126-SM-5KM3H 21.7
GTEX-Q2AG-2926-SM-2HMJ3 21.7
GTEX-13NYS-3126-SM-5KLYV 21.6
GTEX-13OW7-3026-SM-5L3GY 21.3
GTEX-13QIC-2926-SM-5J2NF 21.2
GTEX-11EI6-3026-SM-5GZZO 21.1
GTEX-13OVJ-2826-SM-5L3GW 21.0
GTEX-ZVT3-3026-SM-5E43N 20.6
GTEX-13S7M-3126-SM-5RQJQ 20.5
GTEX-ZE7O-3126-SM-5HL5X 20.0
GTEX-144FL-3026-SM-5O99C 19.8
GTEX-YJ89-3026-SM-5IFJI 19.7
GTEX-12WSD-3126-SM-5HL7P 19.5
GTEX-11EMC-3226-SM-5EGKW 19.1
GTEX-139T8-1026-SM-5J2MC 18.8
GTEX-147GR-3026-SM-5S2ML 18.5
GTEX-13JVG-3126-SM-5L3FH 18.1
GTEX-PWO3-0926-SM-2I5EY 18.0
GTEX-ZAJG-3126-SM-5HL9J 17.9
GTEX-13JUV-2926-SM-5LZX7 17.6
GTEX-11TTK-2926-SM-5PNYP 17.4
GTEX-131XW-3126-SM-5LZUC 17.3
GTEX-12ZZW-2926-SM-5LZUP 16.9
GTEX-11WQK-3026-SM-5EQL6 16.6
GTEX-1445S-3026-SM-5O9BR 16.6
GTEX-11OC5-0726-SM-5P9JK 15.9
GTEX-11GSP-3226-SM-5986O 15.3
GTEX-1117F-3226-SM-5N9CT 14.5
GTEX-13IVO-2926-SM-5L3CZ 12.4
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 40.0
Samples: 108

Max RPKM: 103.7
Min RPKM: 7.5
Std RPKM: 16.6
Median RPKM: 41.5
GTEX-QDT8-0011-R10A-SM-32PKG 103.7
GTEX-QVJO-0011-R10A-SM-2S1QJ 79.6
GTEX-S7SE-0011-R10A-SM-2XCDF 76.0
GTEX-WVLH-0011-R10A-SM-3MJFM 70.2
GTEX-T6MN-0011-R10A-SM-32QP7 68.7
GTEX-131YS-0011-R10b-SM-5EQ5N 65.5
GTEX-13FLW-0011-R10b-SM-5LZZF 65.4
GTEX-QMR6-0011-R10A-SM-32PKO 65.4
GTEX-XMD1-0011-R10A-SM-4AT4A 64.0
GTEX-WL46-0011-R10A-SM-3MJFQ 61.9
GTEX-WWYW-0011-R10A-SM-3NB35 61.5
GTEX-YFC4-0011-R10a-SM-4SOK5 59.8
GTEX-12WSE-0011-R10b-SM-5P9JV 58.3
GTEX-145MH-0011-R10b-SM-5PNUK 57.5
GTEX-T5JC-0011-R10A-SM-32PM2 56.9
GTEX-WZTO-0011-R10B-SM-4E3KB 55.5
GTEX-13X6J-0011-R10b-SM-5PNWA 55.3
GTEX-Y8DK-0011-R10A-SM-4SOK1 55.3
GTEX-13X6K-0011-R10a-SM-5P9JR 55.0
GTEX-QVUS-0011-R10A-SM-3GIK3 54.0
GTEX-XLM4-0011-R10A-SM-4AT5P 53.4
GTEX-Q2AG-0011-R10A-SM-2HMLA 52.4
GTEX-X585-0011-R10A-SM-46MUY 51.8
GTEX-1313W-0011-R10b-SM-5DUXA 50.6
GTEX-12ZZY-0011-R10b-SM-5HL7W 50.5
GTEX-ZVZQ-0011-R10b-SM-51MRT 50.0
GTEX-P44H-0011-R10A-SM-2XCEK 49.6
GTEX-12ZZX-0011-R10b-SM-5DUWK 48.5
GTEX-12WSF-0011-R10a-SM-5LZVH 48.3
GTEX-ZAB4-0011-R10a-SM-4SOKH 48.3
GTEX-12WSC-0011-R10a-SM-5GU57 48.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC 47.8
GTEX-X4XX-0011-R10B-SM-46MWO 47.5
GTEX-13OVL-0011-R10a-SM-5L3GS 47.2
GTEX-12WSM-0011-R10a-SM-5DUWV 47.1
GTEX-12126-0011-R10b-SM-5BC6T 46.7
GTEX-13O3Q-0011-R10b-SM-5KM39 46.5
GTEX-13CZV-0011-R10b-SM-5LZYD 46.1
GTEX-YJ89-0011-R10a-SM-4SOK9 46.0
GTEX-13S7M-0011-R10b-SM-5PNZB 45.8
GTEX-132Q8-0011-R10b-SM-5DUWZ 45.6
GTEX-131XH-0011-R10a-SM-5EGLJ 45.5
GTEX-145MG-0011-R10a-SM-5PNWG 45.4
GTEX-ZUA1-0011-R10a-SM-51MT6 45.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 45.2
GTEX-11ZUS-0011-R10b-SM-5BC79 44.8
GTEX-N7MT-0011-R10A-SM-2I3E1 44.8
GTEX-N7MS-0011-R10A-SM-2HMJK 44.2
GTEX-145LS-0011-R10a-SM-5PNUQ 43.3
GTEX-13G51-0011-R10b-SM-5LZYF 43.0
GTEX-14ASI-0011-R10b-SM-5S2VZ 42.5
GTEX-14BIN-0011-R10a-SM-5S2UA 42.4
GTEX-13RTJ-0011-R10b-SM-5O9CW 41.8
GTEX-11H98-0011-R10b-SM-5NQ98 41.5
GTEX-NPJ7-0011-R10A-SM-2I3E5 41.4
GTEX-13FHO-0011-R10b-SM-5J2MM 40.4
GTEX-13X6I-0011-R10a-SM-5PNWI 39.6
GTEX-TSE9-0011-R10A-SM-3DB7O 37.6
GTEX-12WSH-0011-R10a-SM-5LZUS 37.5
GTEX-147GR-0011-R10b-SM-5S2UM 37.4
GTEX-Z93S-0011-R10a-SM-4RGNM 37.0
GTEX-13FXS-0011-R10a-SM-5J2MA 36.6
GTEX-13OW8-0011-R10a-SM-5L3H6 36.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 36.1
GTEX-13QIC-0011-R10a-SM-5O9C7 35.6
GTEX-14BIL-0011-R10a-SM-5SI75 35.3
GTEX-ZF28-0011-R10a-SM-4WWEH 34.8
GTEX-NL3H-0011-R10A-SM-2I3E9 34.5
GTEX-13NYB-0011-R10a-SM-5KM43 33.7
GTEX-13N1W-0011-R10b-SM-5MR4H 32.5
GTEX-OXRN-0011-R10A-SM-2I5GC 32.2
GTEX-NPJ8-0011-R10A-SM-2YUMO 32.0
GTEX-X4EP-0011-R10B-SM-4QASJ 32.0
GTEX-13FLV-0011-R10b-SM-5LZZ2 31.7
GTEX-13OW6-0011-R10a-SM-5L3HE 31.1
GTEX-13OW7-0011-R10a-SM-5L3H3 31.0
GTEX-13O3O-0011-R10a-SM-5LUA9 30.8
GTEX-13JUV-0011-R10b-SM-5LZXR 29.8
GTEX-13SLX-0011-R10a-SM-5P9HV 29.7
GTEX-RVPU-0011-R10A-SM-2XCAH 29.3
GTEX-ZVT3-0011-R10b-SM-57WB6 28.9
GTEX-139TS-0011-R10a-SM-5K7TU 28.4
GTEX-145LU-0011-R10a-SM-5PNWJ 28.1
GTEX-12WSD-0011-R10b-SM-5GU79 26.8
GTEX-147F4-0011-R10b-SM-5S2WC 25.2
GTEX-12WSA-0011-R10b-SM-5P9ET 25.1
GTEX-13FTZ-0011-R10b-SM-5KLZS 24.6
GTEX-13NYS-0011-R10a-SM-5MR4S 24.4
GTEX-11GSP-0011-R10a-SM-5NQ7J 22.7
GTEX-NL4W-0011-R10A-SM-2I3DY 21.9
GTEX-12ZZW-0011-R10b-SM-5HL9X 21.4
GTEX-ZXG5-0011-R10a-SM-57WDD 20.8
GTEX-13N2G-0011-R10a-SM-5MR34 20.4
GTEX-13OVJ-0011-R10b-SM-5L3HT 19.8
GTEX-11WQC-0011-R10a-SM-57WCT 19.7
GTEX-13QJC-0011-R10a-SM-5SI63 19.5
GTEX-11WQK-0011-R10a-SM-5BC6R 19.1
GTEX-13SLW-0011-R10a-SM-5S2UI 18.6
GTEX-X261-0011-R10B-SM-4E3JT 16.1
GTEX-1445S-0011-R10a-SM-5PNWB 16.0
GTEX-13JVG-0011-R10b-SM-5KM2P 15.8
GTEX-13NZA-0011-R10b-SM-5KM54 15.5
GTEX-OXRO-0011-R10A-SM-2I5EH 15.5
GTEX-14753-0011-R10b-SM-5S2WE 15.0
GTEX-1477Z-0011-R10b-SM-5S2RF 13.7
GTEX-ZV68-0011-R10a-SM-51MT7 11.0
GTEX-13IVO-0011-R10a-SM-5LZY3 9.0
GTEX-131XW-0011-R10a-SM-5DUVA 7.5
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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