We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
LANCL1
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:44.6RPKM
FANTOM5:84.7Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Medium
 

Antibody staining

Antibody HPA034994

 

Glial cells

Low  

Neuronal cells

Medium  
 
 
 

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

44.6

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 44.6
Samples: 94

Max RPKM: 102.6
Min RPKM: 8.6
Std RPKM: 20.6
Median RPKM: 44.7
GTEX-WZTO-0011-R1B-SM-3NMAR 102.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 94.9
GTEX-T6MN-0011-R1A-SM-32QOY 94.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 91.0
GTEX-13G51-0011-R1a-SM-5LZYR 85.1
GTEX-PVOW-0011-R1A-SM-32PL6 82.5
GTEX-P44H-0011-R1A-SM-3NM8J 79.5
GTEX-UTHO-0011-R1A-SM-3GIJO 74.1
GTEX-ZAB4-0011-R1a-SM-4RGNO 72.4
GTEX-13OVL-0011-R1a-SM-5L3H5 70.2
GTEX-13JUV-0011-R1a-SM-5LZY4 66.5
GTEX-13OW6-0011-R1a-SM-5L3HQ 66.1
GTEX-13S7M-0011-R1b-SM-5PNZE 65.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 64.9
GTEX-1212Z-0011-R1b-SM-5BC72 64.9
GTEX-WL46-0011-R1A-SM-3LK6M 62.8
GTEX-12WSF-0011-R1a-SM-5DUVI 61.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60.8
GTEX-145LS-0011-R1b-SM-5PNUP 60.8
GTEX-11GSO-0011-R1b-SM-57WD3 60.7
GTEX-QMR6-0011-R1A-SM-32PKW 60.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60.1
GTEX-QDT8-0011-R1A-SM-32PKS 58.7
GTEX-13N1W-0011-R1b-SM-5MR4T 57.8
GTEX-RNOR-0011-R1A-SM-5SI8F 57.0
GTEX-ZUA1-0011-R1a-SM-4YCE2 56.4
GTEX-1313W-0011-R1b-SM-5EQ4A 56.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 55.5
GTEX-12WSB-0011-R1b-SM-5P9EY 54.2
GTEX-131XH-0011-R1a-SM-5DUWA 53.3
GTEX-XOTO-0011-R1B-SM-4B65C 53.2
GTEX-13OW5-0011-R1b-SM-5L3GE 50.6
GTEX-N7MT-0011-R1a-SM-5SI7S 50.5
GTEX-13NZA-0011-R1b-SM-5LUAF 50.5
GTEX-R55E-0011-R1A-SM-2TC6N 50.4
GTEX-11UD1-0011-R1b-SM-5BC7D 50.4
GTEX-13N2G-0011-R1b-SM-5MR3G 50.3
GTEX-13O3O-0011-R1b-SM-5KM2K 49.6
GTEX-NPJ8-0011-R1a-SM-33HCB 49.5
GTEX-XMD1-0011-R1A-SM-4AT4C 48.2
GTEX-QVJO-0011-R1A-SM-2S1QI 47.8
GTEX-X585-0011-R1B-SM-46MVE 47.8
GTEX-YFC4-0011-R1a-SM-4V6EH 47.2
GTEX-N7MS-0011-R1a-SM-2HMJG 46.3
GTEX-14ASI-0011-R1b-SM-5S2TY 45.5
GTEX-T5JC-0011-R1A-SM-32PM6 45.3
GTEX-139TT-0011-R1a-SM-5LZVD 44.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 44.7
GTEX-13X6I-0011-R1b-SM-5PNZC 43.5
GTEX-12WSE-0011-R1b-SM-5GU4V 41.5
GTEX-12WSH-0011-R1a-SM-5GU5V 41.3
GTEX-145LU-0011-R1a-SM-5Q5CE 39.5
GTEX-145MH-0011-R1b-SM-5PNWY 38.6
GTEX-WWYW-0011-R1A-SM-3TW8G 38.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 37.2
GTEX-S7SE-0011-R1A-SM-2XCDE 36.4
GTEX-13JVG-0011-R1a-SM-5KM32 36.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 36.0
GTEX-131YS-0011-R1a-SM-5DUXC 35.5
GTEX-13OW7-0011-R1b-SM-5L3HF 35.3
GTEX-12WSM-0011-R1a-SM-5LZW6 35.0
GTEX-NPJ7-0011-R1a-SM-3GACT 34.8
GTEX-11ZTS-0011-R1a-SM-5BC71 34.5
GTEX-13FXS-0011-R1a-SM-5K7U6 34.1
GTEX-13FLW-0011-R1b-SM-5LZX2 34.1
GTEX-X4XX-0011-R1B-SM-3P622 33.8
GTEX-13CF2-0011-R1a-SM-5LZY1 30.6
GTEX-13112-0011-R1b-SM-5HL7K 30.6
GTEX-144GL-0011-R1a-SM-5PNZ5 29.6
GTEX-12WSD-0011-R1b-SM-5LZVY 29.6
GTEX-13NYB-0011-R1b-SM-5KM4F 27.5
GTEX-YJ89-0011-R1a-SM-4RGLS 27.4
GTEX-1399T-0011-R1b-SM-5DUWN 27.4
GTEX-WVLH-0011-R1A-SM-4MVOK 27.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 26.2
GTEX-ZVZQ-0011-R1a-SM-57WBU 25.5
GTEX-PWO3-0011-R1A-SM-2I5EW 25.4
GTEX-11ONC-0011-R1a-SM-57WD4 25.4
GTEX-132Q8-0011-R1a-SM-5EGLK 25.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 24.6
GTEX-TSE9-0011-R1A-SM-3DB7E 24.5
GTEX-13FHO-0011-R1b-SM-5KLZG 24.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 23.5
GTEX-13OW8-0011-R1a-SM-5L3HI 19.5
GTEX-144GO-0011-R1a-SM-5PNWO 18.5
GTEX-13SLW-0011-R1a-SM-5S2W7 18.5
GTEX-13NYS-0011-R1b-SM-5MR55 16.0
GTEX-139T8-0011-R1a-SM-5HL75 14.6
GTEX-NL3H-0011-R1a-SM-48TDJ 14.0
GTEX-13FHP-0011-R1b-SM-5K7XL 12.0
GTEX-13PDP-0011-R1a-SM-5PNX5 10.7
GTEX-ZF28-0011-R1a-SM-4WWD1 10.1
GTEX-ZE7O-0011-R1a-SM-57WDM 9.1
GTEX-13FTY-0011-R1a-SM-5LZXE 8.6
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

84.7

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 84.7
FF:10153-102I9 76 years, female 97.5
FF:10374-105G5 89 years, female 80.1
FF:10169-103B7 60 years, female 76.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.