Tissue expression of EFHD1 - Summary - The Human Protein Atlas

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EFHD1

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TISSUE

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CELL

CANCER

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	EFHD1
Gene description	EF-hand domain family, member D1
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	6
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Tissue enhanced (breast)
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Cytoplasmic and membranous expression in a majority of tissues, most abundant in placenta, kidney and breast.

DATA RELIABILITY
Data reliability description	Antibody staining mainly consistent with RNA expression data. Pending external verification.
Reliability score	Supported based on 2 antibodies. HPA049331 , HPA056959
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Tissue enhanced (breast)
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	EFHD1 (HGNC Symbol)
Synonyms	FLJ13612
Description	EF-hand domain family, member D1 (HGNC Symbol)
Entrez gene summary	EFHD1 is an EF-hand domain-containing protein that displays increased expression during neuronal differentiation (Tominaga and Tomooka, 2002 [PubMed 12270117]).[supplied by OMIM, Mar 2008]
Chromosome	2
Cytoband	q37.1
Chromosome location (bp)	232606057 - 232682781
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000115468 (version 83.38)
Entrez gene	80303
UniProt	Q9BUP0 (UniProt - Evidence at protein level)
neXtProt	NX_Q9BUP0
Antibodypedia	EFHD1 antibodies

PROTEIN BROWSER

EFHD1-001	EFHD1-002	EFHD1-003	EFHD1-004	EFHD1-007	EFHD1-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
EFHD1-001 ENSP00000264059 ENST00000264059	Q9BUP0 [Direct mapping] EF-hand domain-containing protein D1 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005509 [calcium ion binding] GO:0005739 [mitochondrion] GO:0005743 [mitochondrial inner membrane] GO:0031175 [neuron projection development] GO:0070062 [extracellular exosome] Show all	239 aa 26.9 kDa	No	0
EFHD1-002 ENSP00000386243 ENST00000409708	Q8WYH2 [Direct mapping] EF-hand domain-containing protein D1; Putative uncharacterized protein DKFZp781H0842; Putative uncharacterized protein PP1187 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005509 [calcium ion binding] Show all	127 aa 14.4 kDa	No	0
EFHD1-003 ENSP00000386556 ENST00000409613	Q9BUP0 [Direct mapping] EF-hand domain-containing protein D1 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005509 [calcium ion binding] GO:0070062 [extracellular exosome] Show all	143 aa 16.1 kDa	No	0
EFHD1-004 ENSP00000386685 ENST00000410095	Q8WYH2 [Direct mapping] EF-hand domain-containing protein D1; Putative uncharacterized protein DKFZp781H0842; Putative uncharacterized protein PP1187 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005509 [calcium ion binding] Show all	127 aa 14.4 kDa	No	0
EFHD1-007 ENSP00000401073 ENST00000427698	C9JTV4 [Direct mapping] EF-hand domain-containing protein D1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005509 [calcium ion binding] Show all	81 aa 9 kDa	No	0
EFHD1-201 ENSP00000484568 ENST00000611312	A0A087X1Z2 [Direct mapping] EF-hand domain-containing protein D1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005509 [calcium ion binding] Show all	142 aa 16.2 kDa	No	0

Contact

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.